Basic Information

Insect: Choristoneura rosaceana
Gene Symbol: -
Assembly: GCA_037349165.1
Location: JAZBNJ010000042.1:7074767-7077232[+]

Transcription Factor Domain

TF Family: MYB
Domain: Myb_DNA-binding domain
PFAM: PF00249
TF Group: Helix-turn-helix
Description: This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 2.6 4.1e+03 -1.1 0.1 22 33 236 247 233 258 0.81

2 5 7.3e-09 1.2e-05 26.3 0.1 2 45 268 313 267 314 0.94

3 5 6.4e-09 1e-05 26.5 0.4 2 44 321 367 320 369 0.94

4 5 3.1e-09 4.9e-06 27.5 0.0 1 42 373 414 373 415 0.98

5 5 2.5e-06 0.004 18.2 0.0 4 46 426 470 424 470 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	2.6	4.1e+03	-1.1	0.1	22	33	236	247	233	258	0.81
2	5	7.3e-09	1.2e-05	26.3	0.1	2	45	268	313	267	314	0.94
3	5	6.4e-09	1e-05	26.5	0.4	2	44	321	367	320	369	0.94
4	5	3.1e-09	4.9e-06	27.5	0.0	1	42	373	414	373	415	0.98
5	5	2.5e-06	0.004	18.2	0.0	4	46	426	470	424	470	0.97

Sequence Information

Coding Sequence: ATGGATACGGATAGTGACATCGACAGCGACCAAGAGTCGCAATTAAACGATTTAGCGCAACTACAGGCTGCTTTGGACGATGATGAGCCCACCTCAATGTTCCTTGAGCCGTACATGAGTCCTAGTGGTACTAACTCGCTACAATCTCAGTCCATACCTAGCACGTCGAGTGCAGATTCCGCTCAGGAGCACGCGAGAATCGACGCAGCACTAGGACTCAATAAATTACTAGATGAAAAGTTAAAGAGGCTTGAAAAAGTACTGGTCGGTCGCTTACACGAATGTAGACAAAAGTTACGCGATTTACATGAGCTAGCAGTCCCTATTGACAAGCAGGATCGCCAGGAAACATTCCGCTACGTAAACTGCGGTAAGCCCTATTTCAAAGACAAATCAAACTTTCCAGCCCCTGATAATGAAGACACCATACTCATGGCCAAAAGTAACATGTATGACTTCTCCGAAATCACTGCTGTGCCTGGCTGGACAGTCAAAGACAAGAGCAACTTTACCAACCTCCTTCTAAAAATGTCCATAGATATTAAAAAGAAAGAGTTAACTTCTAAAATTGCCCAGTTAAAACGAGACAACAAAGATATTAAGCCTAAGCGATTAGAAAAAGAAATTGATGCAATcaacaaagaaatcacagcTTTAAACAATAAATCACTAAAAGATGTAGCTTTGCCAATAGACCAAGAGTATGATTGGGATATTGTAGCCAACAAACTCAACAGACGACACAGTGCCACCGAGTATAGATCACTATGGAAAGTGTTTTTGCATCCAAGTATTAATAAGAGTGTTTGGGATAAAGTTGAGCATACCCGCTTACATGATATTGCAAATGAACACAATCTGCAAGACTGGGATTCTATTGCTAAGGCTCTCAACACAGGCAGGACTGGATACCAATGCTTTGTTTACTTCAGAACCAACATGAGCAACACATTTACAGGGAAAAAATGGAccagagaagaagaagaatatctCAGAAGACTAATTGAGTATTATAAAGAGGATGAATACATCCCATGGGGCAAAGTTGCTTCATCAATGGAAAACCGCACTAAAATCCAGATTTACAATAAATACTTTAGACTTGTTGAAAAAAGGAAAGGCAGGTTCCTTCCGGAAGAAGATGCTGTTATTTTGACATGCCTTGACAAGTTTGGGTTGAACTTCAAAAAAATGTCAGAGTATCTGCCTGGACGCTCTGCTACACAAATTCGTGTGCGCTATGGAGTGCTTGCAAAGAAGAGAATTTCCACCATCTGGACTGTTCAAGAGGACAAGAAGTTATTGCAAATAATGGCAAATGAAGATAGCCTCACAAATTATTCATATGTTACTGACCAGTTTCCAGGAAAAACTCGTGTACATATTAGAGGAAGATATATAACTTTGTTAAAATGGATGAAAAGGCACCCAAACTCTTCACTAGACAATGCCCCAAGGAGAGGCGCGCGCCGCCTAGGTCACGGTCTTGCATCTGACAATCTCAACAAAGCAacagaaaaacttaaaaacagaATTGAATCTGAAATTGAGAAAAGAAAGATCAAAAGGATAACAAGAGAGTCACCTCTTGAAGTTATAGAAGATGCCATTGTTGCCAACCTTTTAACTGAAAAAGTCAAAGAGGAAGAATCTAGAAAAGCAGAAGCCTGTGATGAAGATTTAGTAGTCCTAAATGATGATTTTGTTATATCAGCACAATCCCTGAATGTCACAAATCTGCAGAAGCTAATCATCTTTTTGAGGggaaagttaaataaagatagaTTTAAACATAGCTCTTTTGCTGATCAATATCCAGGGCTTTTGGACACACAGCAGGTAGTTAATCTCTTCCAGGTTAAGAGTTATtctaaaaaaggaaaaatagcAACACCTGTGGTAGTGAATCCTCCAGACATATGGGGAGAGAACACCTTAGATTCCTTAACATATGTACTCCCACCACACTATGCTACAATAACTGGATGCAGAAAACTAATGGCATACATCAATCTTAAGACCAGAAAAGGTATTAGCATGTCTTCTATCAATATAGGCTCAATGATGAAAAGAAATCCCATTTTGAAGCAACAGATGTTTCTTTTGATGGAAAGATTCAATGCATTGTTCCTGTTTCCTATGGTGCTGTCAAATGAAGGTCCAGAGAGAGTAGGAAGGCATATTTTAAAGGATCAACAAAGTAAAAACGACAATGATTCActggaaaaaattgaaattggGCCACCTTGCAACATCATTAGTTTAGACATTCCCAATGGAGCTAAGAACATCAAAGCTTTGAGTAGTGCAAGCAACAGTGCAATAGACCTGGCAGATCCCACTCCAGAACAGCAAGCCCTAAATTGTGTACAAAAAGTGGTTTTTGACAGCAATGCCTTCAGATTTGTTACTGTAAAAGAGAAAAAGATTTTtaacccgaaaaaaaaaattatgcagCTCTCATGA
Protein Sequence: MDTDSDIDSDQESQLNDLAQLQAALDDDEPTSMFLEPYMSPSGTNSLQSQSIPSTSSADSAQEHARIDAALGLNKLLDEKLKRLEKVLVGRLHECRQKLRDLHELAVPIDKQDRQETFRYVNCGKPYFKDKSNFPAPDNEDTILMAKSNMYDFSEITAVPGWTVKDKSNFTNLLLKMSIDIKKKELTSKIAQLKRDNKDIKPKRLEKEIDAINKEITALNNKSLKDVALPIDQEYDWDIVANKLNRRHSATEYRSLWKVFLHPSINKSVWDKVEHTRLHDIANEHNLQDWDSIAKALNTGRTGYQCFVYFRTNMSNTFTGKKWTREEEEYLRRLIEYYKEDEYIPWGKVASSMENRTKIQIYNKYFRLVEKRKGRFLPEEDAVILTCLDKFGLNFKKMSEYLPGRSATQIRVRYGVLAKKRISTIWTVQEDKKLLQIMANEDSLTNYSYVTDQFPGKTRVHIRGRYITLLKWMKRHPNSSLDNAPRRGARRLGHGLASDNLNKATEKLKNRIESEIEKRKIKRITRESPLEVIEDAIVANLLTEKVKEEESRKAEACDEDLVVLNDDFVISAQSLNVTNLQKLIIFLRGKLNKDRFKHSSFADQYPGLLDTQQVVNLFQVKSYSKKGKIATPVVVNPPDIWGENTLDSLTYVLPPHYATITGCRKLMAYINLKTRKGISMSSINIGSMMKRNPILKQQMFLLMERFNALFLFPMVLSNEGPERVGRHILKDQQSKNDNDSLEKIEIGPPCNIISLDIPNGAKNIKALSSASNSAIDLADPTPEQQALNCVQKVVFDSNAFRFVTVKEKKIFNPKKKIMQLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01134738;
90% Identity: iTF_00155245;
80% Identity: -