Basic Information

Insect: Pachydiplax longipennis
Gene Symbol: salm
Assembly: GCA_036926295.1
Location: JAVFKF010000012.1:23459762-23475291[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 5.7e-06 0.0023 20.5 0.9 1 23 648 670 648 670 0.98

2 9 1.1e-05 0.0045 19.6 2.1 1 23 676 698 676 698 0.98

3 9 0.071 29 7.6 3.8 2 23 1105 1126 1104 1126 0.98

4 9 6.9e-08 2.8e-05 26.5 0.6 1 23 1132 1154 1132 1154 0.97

5 9 0.00014 0.057 16.1 3.3 1 23 1164 1186 1164 1186 0.98

6 9 0.0024 0.95 12.3 1.9 2 23 1560 1581 1559 1581 0.97

7 9 3.1e-07 0.00012 24.5 1.3 1 23 1587 1609 1587 1609 0.99

8 9 1.6e-06 0.00063 22.3 4.0 3 23 1704 1724 1702 1724 0.96

9 9 9e-08 3.6e-05 26.2 1.0 1 23 1730 1752 1730 1752 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	5.7e-06	0.0023	20.5	0.9	1	23	648	670	648	670	0.98
2	9	1.1e-05	0.0045	19.6	2.1	1	23	676	698	676	698	0.98
3	9	0.071	29	7.6	3.8	2	23	1105	1126	1104	1126	0.98
4	9	6.9e-08	2.8e-05	26.5	0.6	1	23	1132	1154	1132	1154	0.97
5	9	0.00014	0.057	16.1	3.3	1	23	1164	1186	1164	1186	0.98
6	9	0.0024	0.95	12.3	1.9	2	23	1560	1581	1559	1581	0.97
7	9	3.1e-07	0.00012	24.5	1.3	1	23	1587	1609	1587	1609	0.99
8	9	1.6e-06	0.00063	22.3	4.0	3	23	1704	1724	1702	1724	0.96
9	9	9e-08	3.6e-05	26.2	1.0	1	23	1730	1752	1730	1752	0.98

Sequence Information

Coding Sequence: ATGATTTGGGACTATGTGATGAAGCAAGACGtcGAAGAAGCGTCGGGATCATGCTCCGAAGAAGATGTAGCCGGAGGTAGCGGCGTATCTGGCGGTGGAGTAGATGAGCTGTCCTGCAGACGCTGCGGCCGCGAGCATCAGACACATGAAGAACTCCTCGAACACCGTACGCAGTGTCGCGAGGCCTCCACTCCTAACAGCGGTGATATCGACGAGGAGGACTGTCTGGAAACAGGAGGAAGAGAGCCGGTTGACGCTGAGGGTGTCGTAGGTGAATGTGAAGAGTCATATGAGGAGGATGGGGACAGAGAAGAGGTCTCGGAAGCAATGGACGCCGAAGAAGACGTCGCGAGACCCCTTGATGatagagaagaagaagatgacgaAATGGATGGTGAAGAAGAGCTTCATGGGAAAAACGTCATGCGTCGGAGGCTGGAAGATGCGGACAACAATAATAACGAAGATCTCgagaaagaagaaggaaatgatGATAGAGGAGCGTCTTCTGAGGGGCAGGAAGAAGAGGGTCAAGCAGCGCATCCGCAAATGCTAAACAGGAGGAAGGAACGCAGCAGAAAACCGAGAAAAGCCGTCTCCATCAAAGACATGGTTGATCCCATTCAAGCAGGCCTCATCCATCCAGCATTTCCACTTCAATTCCCTGTCACGGCAGACCGAGCTGCCTTGCTGGCTCCCCTTTTCCAATTTCCCCAAGGTGCTGTATCTCCTGATTCGACGGCGAAGACAGAGGGTGCGGCTCTGGGCTCTCCCGCAGCGGCGGCAGCGGCAGCGGGCGCTAACATTACTCCCGCGATCGCTAGTTTGCTGTCGCAGATGGGAATACCTGGCCTCACTTTACCCGCTACTAATGTCACTCTGGAAGCATTGCAAAATACCAAGGTAGCTGTCGCTCAGTTCGCAGCGTCGGCTCTTGCAGCCTCTGGAGGAGCGGCAGCCGGAGCGGCTGGAGGTAACAATACTGAAAAGGCAGCGGCAGCCATTCAAGAATTGGCGGTCCTGCAATCGACTCTCTACACACTCCAGCATCAGCAAATGCTTCAGCTACAACTGATTCAGCAACTTCAACAGCAGCTCCAAATTACAAGGTGCAACCCACAAGATAAGGAAGACGGAGACGAAGGGGATGATGGAGGTAGAGATGATGACAGAGATGAAGGAGTTGATGGAGCCGATGGCGGAAGTGGAATAGGTGGCGATGGTGATTCTCCCGGTCTAGACGAAGAGGGAAGAAGAAGTCCATCTCTCGCTAGAGCTGCTTCTTCTCCATCATCTTCGGACGGTTCCTCTCCATCAGTTGCTGTATCGTCCGCTTCGAAGCATACCACCACTCCTCCGCCTTCTCATCCTTCCCAGTCGCAATCTCAGCAGCTCTTACAAAGGCATTTTGGAAGCATGTCTTCCTCGTCCTCTTCGAAGAGCCTAATGCAGCATTATTCCCATTCCTCCTTGCTTTCCCATCAACTCCCTCACTCGTCGCTGCTCAGCGGACAGCGCTTGCCAGCATCTGCACCTACAACTTCCGGTCCCGTTTCGGTTAGCGCCCCTTCCTCTAGTTTGGCGACGATGGCACATACCCCTCTGCCAGCAACGGGTGCTCCCTTACCCCCAAGGCCACCAATTTCCTCatcatctctttctctcacACCTGGAGGAACGGGATCAAGTCAAACAGCGCAACAAACCGCAGCTTCTATTTTAGCATCAACTATCATAACTAACTCAGATCCGCCCCCACCACCAACTGAGCCAAATACATTGGAAATGTTGCAACGCCGAGCCGAAGAGGTTTTGGATAGTGCGAGTCAAGGTCTCTTAGGGCATGGACTAGCTGACGAGCTAGCTTCTGCCTCTGGCCGTAAAGGAGGAAGCGGGAAACCTTCTGGCGGTCTGTCTCCCCGTAGCGAGCCCTTTTTCAAGCACCGATGCCGATACTGTGGAAAGGTTTTTGGGAGCGACTCAGCTCTCCAGATACATATTCGCTCTCATACAGGAGAGCGTCCGTTCAAGTGCAATGTGTGTGGAAGTCGTTTCACGACGAAGGGAAACCTCAAGGTTCACTTCCAACGGCATACGGCCAAGTTTCCCCACATCAAGATGAACCCTAACCCAGTTCCTGAACATTTGGACAAATTTCATCCGCCTCTTTTGGCTCAGCTGGGGCCTCCTCCCCCGCCTCCGCCTCCACCACCGCCACATTCCCTCCATCCGCATCACATGAATCCTTTTACATCCCCCAGCTTTCAACCACCTCCCACGCAACCTCCTCCTCCTCCGCCTCCTCCACCACCAACGACTTCCTCCGCATTGTTCAGACATGATCTCGTTCAGCAGCATCTGCAAGCTTCCAAACAAGCAAGTTCTCACCCACACATGCCTCCCCATCCTTCGCTACCGCATCACCTTCCACTCTATGGTGGACCTCATATGCCTCCTCCGAACATGGCTTCCGTGCCGCCTCAACCGCCCCCAACTCAGGCACAACAAGATACACCAGAAAATTTAAGCAAGCCACAGCAACAAACAAGCCCGCCACCGCAGAACGTCAGTGCGCAGACTACTTGCAAGAAGGAGCCGTGCGATGAGTCTGAGAACGCTAACGAAGGAGATTCCACAGCCAGAGACCAAGTCAGTAGAGAAGAGGAAGGTGAGGAATCTGAGGAGCGTATGGGAAGAGTGAGTGGCGAAGAAGGTGCGCGTTCGAGTCCTAAAACTGAACCAGATTCCGAAGCGGAAAGGTATCCTTCGCCTGGTGGAGTGTTTGGTACAGATCTGAGCCTTGATAGCAAATACAGCGGGGAAGACATGGGAGATGATGACGATGGCGTGATGCCAATGGATGGAGAGGATGACGAATGCCAGGATGAGCGTGGCAGCAGAGAAGGTGGGCGTAGCGGTAGCCGCAGCACCCCTGGCGTCGAAGGAGACGGCGACAGCATACAGGACCAGCCCGAAAATTTGTCCAAATCAGTCGGCGATCGTGCTAGCTCCGGCGACAGTGTCCAGAGATTGCCAGCTTCCCTTCCGTTTCCTTTAGGGAGTTCCACTGGACTGGGAGGACGGGCCGCATCAACGTCGCCTACTTTAATGCATCACACAGGTATTGGCATGCCACATCTCTTAGGAGATGTAGATCCAGCGAAAGACCCGGCCATTTACACTTCATTGCTACCACGTCCGGGTAGCAACGATAATTCTTGGGAAAGCCTTATTGAAGTCACGAAGACATCAGAAACAAGTAAATTACAACAACTGGTTGATAACATCGAACACAAATTGACTGACCCAAATCAGTGTGTGATATGCCACCGCGTTTTATCGTGTAAAAGCGCTCTTCAAATGCATTACCGAACCCATACTGGCGAGAGGCCCTTCCGATGTAAAATCTGCGGCCGAGCCTTCACGACCAAGGGAAATCTGAAGACGCACATGGGTGTCCATCGAGCGAAACCTCCCACTCGCTTATTGCACCAGTGTCCTGTTTGTCATCGTCGATTCACTAACTCCTTAGTTCTCCAGCAGCACATTCGTCTACACACGGGAGAACCAACAGATCTCACTCCGGACCAGATCAGAGCCGCCGAAGTCAAGGACTTTCCTCCATCCCCAATTCCTCCTCCTATGGGATCCCATCCCGCGGCAGCAGCCTTTGCGTCGTCTTTTCTTCGGCAgactcctcctcctcctcattTACAGCACCACCCCTTTTCCGGGCTCTCTCCTCTACATCCTCCTCCGCCGCCTCCACATCTTGGTCTTCACCCTCCTCCAACACCTCCATCCCGTACCTCTCCAAAGCCAGAGACTGGCTCTGAGGATATGGAGGATAAGGAGGAATCCCAAAGGAGGCAAGATGTTGATGATGAGGATGATCTTGGTGAAGGGTCGCAGATGGCCGCTGAAGATGAAGGTGGAGACGAAGAAGAAAGCAGAGCAAGTGAGGAGGGTTTAGCCGAAAGGGATGTTAAGGATGAGGATAGGAAGAATAATTGGTCAGACGAGACAGGAGAAACACCGCTTATTTCCGCCACAGCAGCAACCACTCCGCTTCAAGGGCAGCAGCCGCAATATATGAGGCAGGGCACTCCTTTGTCTCTCCATTCCCAGCAAGTTATGCTACCAGCATCTCTTCCTCCAACTTCAAGCGCAGCTTCTTTCTCAACATCTCTGGCAGCTCTTGAGAATCAAGTACGCACTATAACAACTATGGCTGCCGCTGCTGCTGCTGCCGCCGCCGCCAACCACCAAGATACCACTGCTGGAAGTAGGGACGATAGATCGCCTGGATCAATCAGTAGTCCGGGTAGAACCGGAAGCCCTAGTGTCGGCCCCTCGCGCGTTAGTCCAGCAGTATCCGAGTCCAATTCGCTTGGTGCGTTGGATCTAACTCCAAGAGGAAGCGCCGCTGGGAGTGGGGGCGCGGGAGGTGGAGGAAGTGGCAGTGTTAGTGGTGTAGGAGGGAACATTGGCCCTTTGGGTGCTATGGGTGGAGGACCTCCTCATCCTCCGGTATTTTCTGCTTTCGGATTGATGCCACCTTCTTCGGCATCCCCTTTGATGACTTCGGCTTTGTCATCACTTACCTCTTCCGTTCTTACATCCACCGCGTTCAGCCCAATGGCCCTCTCCGTTGGGCCAGGAGTGAGAGGAAACACGACATGCAACATCTGCTACAAGACATTCGCATGTAACTCTGCCCTTGAGATACACTACCGGAGTCATACCAAGGAGCGCCCTTTCAAGTGCAGCATCTGCGATCGGGGGTTTTCAACCAAGgGTAATATGAAGCAGCATATGCTTACTCACAAGATTAGAGACATGCCACCTCATTTGTTTGAGGCCAGCAGCCGCAGTCCAAGTGCTGGTTCCCAGGGACTGCCAATGAATGAGGATGCTAATCATCATGGAAGTGGGGGAAGCAACGGTAGTATTACATCAGGAGTGCAATCCGAAGATGTGGGGTCTATGGGAGAGCCTAAAACAATAACTGGTCCAGTAGCACTAGATGGTTCCAGCATCAAAAGGCCTCCAGAAAGTGAAGGGGCTCTTCCTATACCCAAGAGACCACCTGGCTTGCCAAAGCACTTGTGCCACGTTTGCAATAAGAACTTCTCCTCATCGTCAGCACTGCAGATTCACATGAGAACGCACACTGGGGACAAGCCGTTCAAGTGCACTATCTGTCAAAAAGCTTTCACCACAAAGGGGAACTTAAAGGTGCACATGGGCACGCACATGTGGAGCAACGGGGCATCAAGGAGGGGCAGGAGAATGTCCTTGGATCTCCCACCCATCCCCATGACACCAAAGGATTCAGAGTTCCTTCAGAGGAGACCTGATCTCTTCTATCCATATCTGCCTGCACCTTTCCTCAATGGCATGCAGCAAAAGttgAATGAGATCTCAGTGATACAGAGTGCCAACAGCAACCACTTGAACGTATCTCCGCAAGTACCACCAACCAGTGGAGCCAATGCCTCAGCAGCAGCAGCTGCTGCTGCTGTTAGCAAATATGCTGCTCTAGCAGCATTTGCAGGATATGACAAACCCATTCCTCCTCATCAtccacctcctcctcctcatCATCACCCTCAATCAGGGGAAACTCACTCTCCCCTCTTTCCTCCCATTCTACGACAACCAATACCACCCCTACCACAGGCATTGAAAGCATCGCCCCCTCCTCCCCCTCTCAATCCTCCTGTCTCTTCCCCATCTCTGCAGCAGACTCATCAACAGCAGCAGCACTTACACAGTGGACCGATGAACCCCCAAAGGAACCCATCCCCTAACAGCCCTCCCATGTGGGACCTACATTTTGAAAGGGAGCAGAGGTCTGCAATGCAAGGAGATGGCGAGGGGCTTATGGACAGCTCACCTACTCCCTCTCCTTCAACTCCTTCCCCCATGGTCACAACTAGGGAAGAGAGTTTAGTTGTGTGA
Protein Sequence: MIWDYVMKQDVEEASGSCSEEDVAGGSGVSGGGVDELSCRRCGREHQTHEELLEHRTQCREASTPNSGDIDEEDCLETGGREPVDAEGVVGECEESYEEDGDREEVSEAMDAEEDVARPLDDREEEDDEMDGEEELHGKNVMRRRLEDADNNNNEDLEKEEGNDDRGASSEGQEEEGQAAHPQMLNRRKERSRKPRKAVSIKDMVDPIQAGLIHPAFPLQFPVTADRAALLAPLFQFPQGAVSPDSTAKTEGAALGSPAAAAAAAGANITPAIASLLSQMGIPGLTLPATNVTLEALQNTKVAVAQFAASALAASGGAAAGAAGGNNTEKAAAAIQELAVLQSTLYTLQHQQMLQLQLIQQLQQQLQITRCNPQDKEDGDEGDDGGRDDDRDEGVDGADGGSGIGGDGDSPGLDEEGRRSPSLARAASSPSSSDGSSPSVAVSSASKHTTTPPPSHPSQSQSQQLLQRHFGSMSSSSSSKSLMQHYSHSSLLSHQLPHSSLLSGQRLPASAPTTSGPVSVSAPSSSLATMAHTPLPATGAPLPPRPPISSSSLSLTPGGTGSSQTAQQTAASILASTIITNSDPPPPPTEPNTLEMLQRRAEEVLDSASQGLLGHGLADELASASGRKGGSGKPSGGLSPRSEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHTAKFPHIKMNPNPVPEHLDKFHPPLLAQLGPPPPPPPPPPPHSLHPHHMNPFTSPSFQPPPTQPPPPPPPPPPTTSSALFRHDLVQQHLQASKQASSHPHMPPHPSLPHHLPLYGGPHMPPPNMASVPPQPPPTQAQQDTPENLSKPQQQTSPPPQNVSAQTTCKKEPCDESENANEGDSTARDQVSREEEGEESEERMGRVSGEEGARSSPKTEPDSEAERYPSPGGVFGTDLSLDSKYSGEDMGDDDDGVMPMDGEDDECQDERGSREGGRSGSRSTPGVEGDGDSIQDQPENLSKSVGDRASSGDSVQRLPASLPFPLGSSTGLGGRAASTSPTLMHHTGIGMPHLLGDVDPAKDPAIYTSLLPRPGSNDNSWESLIEVTKTSETSKLQQLVDNIEHKLTDPNQCVICHRVLSCKSALQMHYRTHTGERPFRCKICGRAFTTKGNLKTHMGVHRAKPPTRLLHQCPVCHRRFTNSLVLQQHIRLHTGEPTDLTPDQIRAAEVKDFPPSPIPPPMGSHPAAAAFASSFLRQTPPPPHLQHHPFSGLSPLHPPPPPPHLGLHPPPTPPSRTSPKPETGSEDMEDKEESQRRQDVDDEDDLGEGSQMAAEDEGGDEEESRASEEGLAERDVKDEDRKNNWSDETGETPLISATAATTPLQGQQPQYMRQGTPLSLHSQQVMLPASLPPTSSAASFSTSLAALENQVRTITTMAAAAAAAAAANHQDTTAGSRDDRSPGSISSPGRTGSPSVGPSRVSPAVSESNSLGALDLTPRGSAAGSGGAGGGGSGSVSGVGGNIGPLGAMGGGPPHPPVFSAFGLMPPSSASPLMTSALSSLTSSVLTSTAFSPMALSVGPGVRGNTTCNICYKTFACNSALEIHYRSHTKERPFKCSICDRGFSTKGNMKQHMLTHKIRDMPPHLFEASSRSPSAGSQGLPMNEDANHHGSGGSNGSITSGVQSEDVGSMGEPKTITGPVALDGSSIKRPPESEGALPIPKRPPGLPKHLCHVCNKNFSSSSALQIHMRTHTGDKPFKCTICQKAFTTKGNLKVHMGTHMWSNGASRRGRRMSLDLPPIPMTPKDSEFLQRRPDLFYPYLPAPFLNGMQQKLNEISVIQSANSNHLNVSPQVPPTSGANASAAAAAAAVSKYAALAAFAGYDKPIPPHHPPPPPHHHPQSGETHSPLFPPILRQPIPPLPQALKASPPPPPLNPPVSSPSLQQTHQQQQHLHSGPMNPQRNPSPNSPPMWDLHFEREQRSAMQGDGEGLMDSSPTPSPSTPSPMVTTREESLVV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01385058; iTF_01402253; iTF_01286708; iTF_01504884; iTF_00307126; iTF_00261407; iTF_00797324;
90% Identity: iTF_01385058;
80% Identity: -