Basic Information

Insect: Sympetrum striolatum
Gene Symbol: salm
Assembly: GCA_947579665.1
Location: OX388344.1:47538688-47554500[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 1.4 4.8e+02 4.2 0.5 2 20 38 56 37 58 0.92

2 10 8.9e-06 0.0031 20.5 0.9 1 23 647 669 647 669 0.98

3 10 1.8e-05 0.0062 19.6 2.1 1 23 675 697 675 697 0.98

4 10 0.11 39 7.6 3.8 2 23 1103 1124 1102 1124 0.98

5 10 1.1e-07 3.8e-05 26.5 0.6 1 23 1130 1152 1130 1152 0.97

6 10 0.00022 0.078 16.1 3.3 1 23 1162 1184 1162 1184 0.98

7 10 0.0037 1.3 12.2 1.9 2 23 1559 1580 1558 1580 0.97

8 10 4.8e-07 0.00017 24.5 1.3 1 23 1586 1608 1586 1608 0.99

9 10 2.5e-06 0.00086 22.2 4.0 3 23 1715 1735 1713 1735 0.96

10 10 1.4e-07 5e-05 26.1 1.0 1 23 1741 1763 1741 1763 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	1.4	4.8e+02	4.2	0.5	2	20	38	56	37	58	0.92
2	10	8.9e-06	0.0031	20.5	0.9	1	23	647	669	647	669	0.98
3	10	1.8e-05	0.0062	19.6	2.1	1	23	675	697	675	697	0.98
4	10	0.11	39	7.6	3.8	2	23	1103	1124	1102	1124	0.98
5	10	1.1e-07	3.8e-05	26.5	0.6	1	23	1130	1152	1130	1152	0.97
6	10	0.00022	0.078	16.1	3.3	1	23	1162	1184	1162	1184	0.98
7	10	0.0037	1.3	12.2	1.9	2	23	1559	1580	1558	1580	0.97
8	10	4.8e-07	0.00017	24.5	1.3	1	23	1586	1608	1586	1608	0.99
9	10	2.5e-06	0.00086	22.2	4.0	3	23	1715	1735	1713	1735	0.96
10	10	1.4e-07	5e-05	26.1	1.0	1	23	1741	1763	1741	1763	0.98

Sequence Information

Coding Sequence: ATGATTTGGGACTATGTGATGACGCAAGACGTCGAAGAAGCGTCGGGGTCTTGCTCCGAAGAAGATGTTGCCGGGGGTAGCGGAGTATCTGGTGGTGGAGTGGATGAGCTGTCTTGCAGACGCTGTGGCCGCGACTATCAGACCCACGAAGAACTCCTCGAGCACCGTACGCAGTGTCGCGAGGCTTCCACTCCAAATAGCGGTGAAATCGACGAGGAGGACGGTCTGGAATCAGGAGGAAGAGAGCAGGTTGAAGCTGAGGGTGTCGTAGGAGAATGTGAAGAGTCATATGAGGAGGATGGGGACAGAGAAGAGGCCTCGGAAGCAATGGAAGCCGAAGAAGACTCCGCGAGACCCCTCGACGATAGAGAAGAAGAAGATGACGAAATGGAGGGCGAAGATGAGCTTAGTGGAAAGCATGTCATGCGCCAGAGGCTGGAAGATGCTGACAACAACAATAACGAAGATCTCGAGAAGGGTGAAGGAAATGATGACAGAGGAGCGTCTTCCGAAGGGCAAGAGGAAGAGGGTCAAGCAGCACATCCACAAATGCTAAACAGGAGAAAGGAACGCAGCAGAAAACCAAGAAAAGCCGTCTCCATCAAAGATATGGTTGATCCAATCCAAGCAGGCCTCGTCCATCCAGCATTTCCACTACAATTTCCGGTCACGGCCGATCGAGCTGCACTGCTGGCTCCCCTTTTTCAGTTTCCACAAGAAGCTGTCTCTCCCGATTCGACGGCGAAGGTAGAGAGTGCGGCTGTAGGTTCTCCCGCAGCAGCAGCGGCGGCAGCGGCAGCGGGCGTAAACATAACTCCCGCAATCGCTAGTTTACTGTCGCAGATGGGAATACCTGGCCTCACTCTACCCGCTACTAATGTTACCCTGGAAGCATTGCAAAATACCAAGGTAGCTGTCGCTCAGTTCGCGGCATCGGCGCTTGCAGCCTCCGGAGGAGCGGCAGCCGGAGCTGCAGGAGGTAACAATACTGAAAAGGCAGCGGCAGCCATTCAGGAATTGGCGGTACTACAATCGACTCTCTACACACTCCAGCATCAGCAAATGCTGCAGCTACAACTGATTCAACAACTTCAACAGCAGCTTCAAATTACTAGGTGCAACCCACAGGATAAGGAAGACGGAGACGAAGGAGAAGACGGTGGAGACGACAGAGAAGACGGAGTTGATGGAGCCGATGGCGAAAGTGGAAGAGGCCCCGATGGCGATTCTCCTGGTCTGGACGAAGAGGGAAGAAGTCCATCCCTCGCTAGAGCTGCTTCTTCTCCATCATCTTCAGACGGTTCCTCTCCATCAGTAGCAGTATCATCCGCTTCGAAGCATACCACTACTCCTCCGCCTTCTCATCCTTCCCAGTCACAATCTCAGCAGCTCTTGCAAAGGCATTTTGGAAGCATGTCTTCCTCATCCTCTACGAAGAGCCTGATGCATCATTACTCCCATTCCTCCATGCTTTCCCATCAACTTCCTCACTCGTCGCTGCTCAGTGGACAACGCTTGCCGGCATCCGCACCAACAACTTCTGGCCCCGTATCGGTTAGCGCCCCCTCCTCTAGTTTGGCAACTTTGGCACATACCCCTCTGCCAGCAACGGGTGCTCCCTTACCCCCAAGGCCACCAATTTCGTCATCATCTCTTTCCCTCGCATCGGGAGGACCAGGATCGAGTCAAACAGCACAACAAACCGCTGCTTCCATTTTAGCATCAACCATTATAACTAACTCGGATCCGCCCCCACCACCAAATGAGCCCAATACCTTGGAAATGTTGCAACGTCGCGCCGAAGAGGTATTGGATAGTGCGAGTCAAGGTCTCTTAGGGCATGGACTAGCTGACGAGCTAGCTTCGGCATCTGGCCGTAAAGGAGGCAGCGGTAAACCCTCTGGCGGTCTGTCTCCCCGTAGCGAACCGTTTTTCAAGCATCGATGCCGGTActgtggaaaggttttcgggagcgattccgccctccagattcatattcgctctcatactggagagcgtccgttcaagtgcaatgtgtgtggcagtcgtttcacgacgaagggaaacctcaaggttcacttccaacggcatacagccaagTTTCCCCATATCAAGATGAACCCTAACCCAGTCCCTGAACATTTGGACAAATTTCATCCGCCTCTTTTAGCACAGCTCGGGCCTCCTCCCCCACCACCGCCTCCACCACCTCCACATTCCCTCCATCCGCATCACATGAATCCCTTCACATCCCCAAGTTTTCAACCTCCTCCAACGCAACCTCCTCCTCCACCTCCGCCACCTCCTACGTCCTCTTCCGCTTTATTCAGACATGATCTCGTTCAGCAGCATCTGCAAGCTTCCAAGCAAGTGGGCTCTCACCCACATATGCCTCCCCATCCTTCGCTTCCTCATCACCTTCCGCTCTATGGAGGACCCCATATGCCTCCTCCACCGAACATAGCTTCTATGCCGCCCCAACCACCCCCAATCCAAGCACAAGATACACCGGAAAATCTAAGTAAACCTCAGCAACAGGCAAGCCCGCCACCACAAAATGTCAGTGCGCAGGCTACCTGCAAAAAGGAGCCGTGCGATGAAACTGAGAGTGCCAACGAGGGAGATTCCACAGCCAGAGACCAAGTCAGTAGAGAAGAGGAGGTTGAGGAATCCGAGGAGCGTATGGGAAGAGCGAGCGGTGAAGAAGGTGCACGATCGAGTCCTAAAACTGAACCCGATTCTGAATTGGAAAGGTATCCTTCACCCGGTGGCGTATTTGGTACAGATCTTAGCCTTGATAGCAAATACAGCGCAGAAGATATGGGAGATGATGACGATGGCGTGATGCCAATGGATGGAGAGGATGATGAATGCCAAGATGAGCGTGGTAGCAGAGAAGGTGGGCGTAGCGGGAGCCGCAGCACACCCGGCGCAGAAGGTGACGGCGACAGCATACAGGACCAGCCCGAAAATTTGTCCAAATCAGTCGGCGACCGTGCCAGTTCCGGCGACAGTGTCCAGAGGTTGCCAGCTTCGCTTCCGTTTCCTTTAGGAGGTTCCGCTGGACTGGGAGGACGTGCCGCATCAACGTCGCCCACTTTGATGCATCACACAGGTATTGGCATGCCTCATCTCTTAGGAGATGTAGATCCAGCTAAAGACCCAGCCATATACACTTCATTGCTACCACGTCCAGGTAGCAACGATAACTCTTGGGAAAGCCTTATTGAAGTCACGAAGACATCAGAAACAAGTAAACTACAGCAACTTGTTGACAACATCGAACATAAATTGACTGACCCAAATCagtgcgtgatatgccaccgtgttttatcgtgcaaaagcgctcttcaaatgcattaccgcacccacactggcgagaggcccttccgatgtaagatctgcggccgcgccttcacgaccaagggaaacctaaagacgcatatgggtgttcaTCGAGCTAAACCTCCCACTCGCTTACTGCACCAATGTCCCGTTTGTCATCGTCGTTTCACTAACTCCTTAGTTCTCCAGCAGCACATTCGTCTACATACGGGAGAACCAACAGATCTCACTCCGGACCAGATCAGAGCCGCCGAAGTCAAGGACTTTCCTCCCTCCCCAATTCCACCTCCAATGGGATCTCATCCCGCGGCGGCAGCCTTTGCGTCGTCCTTTCTTCGGCAGACTCCACCTCCCCCGCACTTGCAGCACCATCCCTTTTCCGGGCTCTCTCCTCTGCATCCTCCTCCGCCACCTCCACATCTTGGTCTACATCCACCTCCAACACCTCCATCCCGTACCTCTCCAAAGCCAGAGACTGGCTCAGAGGATATGGAGGATAAGGATGAATCCCAAAGGAGGCAAGATATTGATGATGACGATGATCTTGGCGATGGGTCGCAGATAGCTGCTGAAGATGAAGGTGGAGACGAAGATGAAAGCAGAGCAAGTGATGACGGTATGGCTGAAAGGGATATGAAGGATGAGGATAGGAAGAATAATTGGTCTGACGAGGCAGGTGAAACACCGCCTATTTCCGCCGCAGCAGTAACCACTCCACTACAGGGGCAGCAGTCGCAATACATGAGGCAGGGCACTCCTTTATCTCTCCATTCCCAGCAAGTTATGCTGCCAGCGTCTCTACCTCCAACTTGCAGCGCAACATCTTTCTCTACATCTCTAGCAGCTCTTGAGAATCAAGTGCGCACTATAACAACTATGGCTGCCGCTGCTGCTGCTGCCGCCGCCGCCAACCACCACAATACCACTGCTGGAAGTAGGGACGACAGATCGCCTGGATCAATCAGTAGCCCAGGTAGAACCGGAAGCCCTAGTGTCGGCCCTTCGCGCGTAAGTCCAGCAGTATCCGAGTCCAATTCGCTCGGTGCATTGGATCTAACTCCACGGGGAAGCGCTGCTGGGAGTGGAGGTGTGGGAGTTGGAGGAAGTGGCAGTGTTAGTGGTGTAGGAGGAGGAAACATTGGCCCTTTGGGTGCTATGGGTGGAGGACCCCCTCATCCTCCGGTCTTTTCAGCTTTCGGATTGATGCCACCCTCTTCGGCATCCCCTTTGATGACTTCGGCTTTGTCATCTCTTACCTCTTCCGTTCTCACATCCACCGCGTTCAGCCCAATGGCCCTCTCCGTTGGGCCAGGAGtgagaggaaacacgacatgtaacatctgctacaagacattcgcatgtaactctgcccttgagatacactaccggagccacaccaaggagcgccctttcaagtgcagcatctgcgatcgagggttctctaccaagGGTAATATGAAGCAGCATATGCTTACTCACAAGATTAGAGATATGCCGCCTCATTTATTTGAGGCCAGCAGCCGCAGTCCTAGCGCTGGCTCCCAGGGACTGCCAATGAACGAGGATGCAAATCATCATGGAAGTGGGGGAAGCAATGGTAGTATTACATCGGGAGTGCAATCTGAAGATATGGGCTCTATGGGAGAGGCTAAAACAATAACTGGTCCTGTAGCGCTTGATGGTTCCAGCATCAAAAGGCCTCCGGAAAGTGAAGGGGCTCTTCCTATACCCAAGAGACCACCTGGTATGTGGAAAAATAATTCAGAAATTTACTCCAATGgcttgccaaagcacttgtgccacgtttgcaataagaacttctcctcatcgtcagcactgcagattcacatgagaacgcacactggggacaagccgttcaagtgcactatctgtcaaaaagctttcaccacaaaggggaacttaaagGTGCACATGGGCACACACATGTGGAGCAACGGGGCATCAAGGAGGGGCAGGAGAATGTCCTTGGATCTCCCACCCATTCCCATGACACCAAAGGATTCAGAGTTCCTTCAGAGGAGACCTGATCTCTTCTATCCATATCTGCCTGCACCTTTCCTCAATGGGATGCAGCAAAAGTTGAATGAGATCTCAGTGATACAGAGTGCCAACAGCAACCACATGAACGTATCTCCGCAAGTACCCCCAACCAGTGGAGCCAATGCCTCGGCAGCAGCAGCCGCTGCTGCTGTTAGCAAATATGCTGCCTTGGCGGCATTTGCAGGATATGACAAACCCATTCCACCTCATCATCCACCTCCTCCTCCTCATCACCACCCACAATCAGGGGAAACTCACTCTCCCCTCTTTCCTCCCATTCTTCGACAACCGATACCACCCCTACCGCAGGCATTGAAAGCATCGCCCCCTCCACCACCCCTCAACCCTCCTGTTTCATCCCCATCCATGCAGCAGTCTCATCAACAGCAGCAGCACTTACACAGTGGACCGATAAACCCCCAAAGGAACCCATCTCCTAACAGCCCTCCCATGTGGGACCTACATTTTGAAAGGGAGCAGAGGTCTGCAATGCAAGGAGATGGTGAGGGGCTTATGGACAGCTCACCAACTCCCTCTCCTTCGACTCCTTCCCCCATGGTCACGAATAGGGAAGAGAGTTTAGTCGTGTGA
Protein Sequence: MIWDYVMTQDVEEASGSCSEEDVAGGSGVSGGGVDELSCRRCGRDYQTHEELLEHRTQCREASTPNSGEIDEEDGLESGGREQVEAEGVVGECEESYEEDGDREEASEAMEAEEDSARPLDDREEEDDEMEGEDELSGKHVMRQRLEDADNNNNEDLEKGEGNDDRGASSEGQEEEGQAAHPQMLNRRKERSRKPRKAVSIKDMVDPIQAGLVHPAFPLQFPVTADRAALLAPLFQFPQEAVSPDSTAKVESAAVGSPAAAAAAAAAGVNITPAIASLLSQMGIPGLTLPATNVTLEALQNTKVAVAQFAASALAASGGAAAGAAGGNNTEKAAAAIQELAVLQSTLYTLQHQQMLQLQLIQQLQQQLQITRCNPQDKEDGDEGEDGGDDREDGVDGADGESGRGPDGDSPGLDEEGRSPSLARAASSPSSSDGSSPSVAVSSASKHTTTPPPSHPSQSQSQQLLQRHFGSMSSSSSTKSLMHHYSHSSMLSHQLPHSSLLSGQRLPASAPTTSGPVSVSAPSSSLATLAHTPLPATGAPLPPRPPISSSSLSLASGGPGSSQTAQQTAASILASTIITNSDPPPPPNEPNTLEMLQRRAEEVLDSASQGLLGHGLADELASASGRKGGSGKPSGGLSPRSEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHTAKFPHIKMNPNPVPEHLDKFHPPLLAQLGPPPPPPPPPPPHSLHPHHMNPFTSPSFQPPPTQPPPPPPPPPTSSSALFRHDLVQQHLQASKQVGSHPHMPPHPSLPHHLPLYGGPHMPPPPNIASMPPQPPPIQAQDTPENLSKPQQQASPPPQNVSAQATCKKEPCDETESANEGDSTARDQVSREEEVEESEERMGRASGEEGARSSPKTEPDSELERYPSPGGVFGTDLSLDSKYSAEDMGDDDDGVMPMDGEDDECQDERGSREGGRSGSRSTPGAEGDGDSIQDQPENLSKSVGDRASSGDSVQRLPASLPFPLGGSAGLGGRAASTSPTLMHHTGIGMPHLLGDVDPAKDPAIYTSLLPRPGSNDNSWESLIEVTKTSETSKLQQLVDNIEHKLTDPNQCVICHRVLSCKSALQMHYRTHTGERPFRCKICGRAFTTKGNLKTHMGVHRAKPPTRLLHQCPVCHRRFTNSLVLQQHIRLHTGEPTDLTPDQIRAAEVKDFPPSPIPPPMGSHPAAAAFASSFLRQTPPPPHLQHHPFSGLSPLHPPPPPPHLGLHPPPTPPSRTSPKPETGSEDMEDKDESQRRQDIDDDDDLGDGSQIAAEDEGGDEDESRASDDGMAERDMKDEDRKNNWSDEAGETPPISAAAVTTPLQGQQSQYMRQGTPLSLHSQQVMLPASLPPTCSATSFSTSLAALENQVRTITTMAAAAAAAAAANHHNTTAGSRDDRSPGSISSPGRTGSPSVGPSRVSPAVSESNSLGALDLTPRGSAAGSGGVGVGGSGSVSGVGGGNIGPLGAMGGGPPHPPVFSAFGLMPPSSASPLMTSALSSLTSSVLTSTAFSPMALSVGPGVRGNTTCNICYKTFACNSALEIHYRSHTKERPFKCSICDRGFSTKGNMKQHMLTHKIRDMPPHLFEASSRSPSAGSQGLPMNEDANHHGSGGSNGSITSGVQSEDMGSMGEAKTITGPVALDGSSIKRPPESEGALPIPKRPPGMWKNNSEIYSNGLPKHLCHVCNKNFSSSSALQIHMRTHTGDKPFKCTICQKAFTTKGNLKVHMGTHMWSNGASRRGRRMSLDLPPIPMTPKDSEFLQRRPDLFYPYLPAPFLNGMQQKLNEISVIQSANSNHMNVSPQVPPTSGANASAAAAAAAVSKYAALAAFAGYDKPIPPHHPPPPPHHHPQSGETHSPLFPPILRQPIPPLPQALKASPPPPPLNPPVSSPSMQQSHQQQQHLHSGPINPQRNPSPNSPPMWDLHFEREQRSAMQGDGEGLMDSSPTPSPSTPSPMVTNREESLVV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01131719;
90% Identity: iTF_01131719;
80% Identity: -