Oarm007295.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Oxytorus armatus
Gene Symbol
egg
Assembly
GCA_958009045.1
Location
OY253747.1:27157943-27162487[+]

Transcription Factor Domain

TF Family
MBD
Domain
MBD domain
PFAM
PF01429
TF Group
Unclassified Structure
Description
The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9.3e-13 2.8e-09 36.7 0.1 5 70 634 693 631 699 0.89

Sequence Information

Coding Sequence
ATGTCTCGTATCGAGGAGGCTGAGATCATAGATCTCGACTCCGACGAGGATCCGTCGTCCAAAAAAGCTAACAATAAACCAGCAAAGAGATGCAACAATTGTATAAATTTCAAATGCATGTCCGGTGTTGATTTGAAAACTGCGCCTTCGTTTGCCTGTGCTTTCTACGGCGTTAATCCTGTGAAGAAGAGAAAACGCTCGATATGCCAACAGTGTTTCAACATAGCGATGGAACATCAGGAGACATTGGCTGCCGCTCTTCACAATAGAACACCAATATTAAACTGCGAATTTCCGGATCACACAATGGAAGTTGAGATATCAGACAGCGAAGAGTCTGACGGGGAAAAGAAAGAGATGTTGGACGTTAGTGgCGATTACTTGCCAGAGGATTTTCTTCTGGACATTGAGCAAAAAATGGACACTGCCCTGAccaatgtatttgaaaaatacgACATAGAATATCAATTAACTTCTTCCCACAAGTTATTGAAATTCGAATGGAATGCGATAAGTGACAAGAATCGGGCTCTGGACAACGAAATACTCTCGATGATAAAGAAGATGGATTCGTTGCGCAATAGTTTGTACAGTAGTTGCGCGCCCGACATAAGGATGCTAGAAGAATTGCAAATAAGTGATCCACCGTCGACGAAACCACCGATTCTAGCACCCAAAAGTTCACCGATCAAACCAGCAACACAAGGTCCGTTGGTTACCGCCGATTGCGAAGTAACGCCGCTTCACGCGGTTAATCGAAGTTTGGGCTATGATCTTCCGCCTCAGGGACCATTTTTCAAAGAATCGCTCGAAATCGATAGTAGAGTGTTCGTCATGAAGCATCCATTGATGCCGTGGGTACGTGGCAAAGTTCAACAGATCATTGCACGCGGGCCTCTTCAGTGTCGTGTAAAATTGTCGGGACGTCGTAGTAACGGCGCTGTACGAACCGTTATCGGCAAGCACATGGCGAGCGATCTTCCCTGCTCGGTAGTGATACCCGTTGCTACGAGAGTCGTCGCTGTCTTTCTCGATGCAAATTCCAGCGACTATTACAGCGGTGTTATAGCTGAACCACCAAAATCGACGAACAGATATCGATATCTCGTATTCTTCGACGATGGCTATGCGCAATACGTTCTTCACAAATACATCTGTATCGTGTGCGAGAACTCGTCACGCGTGTGGGAGGATATTCCCGCGGAGTCCCGAGATTTCGTGAAGAAATATCTCGAGACATATCCGGAAAGACCGATGGTGAAACTTTTGCCTGGGCAAGTTGTGAAAACCGAGTGGAATGGAAAATGGTGGATCGCACGAGTCGTACAGGTTGACGGTAGTCTCGTGCAGATGCATTTCGACGCTGACGACCGAACCGAGTGGATTTATCGAGGCTCAGCGAGACTCGGACCCCTTTATCTTGAACTTTTGAAAGCGAACGCTCGACAACAGGGTCATCATGCATCGGCAAATACCCCTAGTCGCCATAGGCTTCCTCTACCGACTAACaaaaataacGTTCCTTATGTCGAGTACACATCGTTCAATCCGGAACTCGAGAGCGAACAGTCGAACGACGCTACGGCGAACGATAACGCAAAATCCGAGACGACTTCCGGTGGAAAATCTGTTACCGCTATTGCCGCCGCAATGACAGCTACTCCAACGACTCCGGTACCACCACAGTCACGAGCTGTTGCGAAAAAAAGTACAACGAGAAGACAGAGTTCGGCCGATACCACCGGAACATACGTTCCAACCACTGAGAATAAGCCTTCGCACAGTATCGTCtattACCAAACACAGAACAAAATTCAAACTCGGAAATTTGTGGTTCACAAGTGCGGACCGAATTGTGTGAAGGGAATAACATTTACACCCGACGATCTCAAGGGATATTCACCGCTCTCGATACCACTACTCTGTGGCTGGAACAGGCAACTCTGTAAATTTCCAAAGGGCAAAAAAGTTACTCTCTACCAGGCACCGTGTGGCGTTCGTCTTCGTAATATGGAGGAATTGCACAAATATCTACGAATAACTCGCAGTCCAATGTCCGTTGATTTGTTCGATTTTGACTATTGGGTACACTGTTTGGCCGAATTTGTTCTCGACAAGTGTTTCGTGAATATCAAGGATCTCAGTTATGGTGTAGAAAACGTACCGATACCGTGCGTCAACGAGATCGATCATGCTCTTCCGGATACAATCAGATACAGTACACAGAGAGAACCAACCGAGGgtgttaatatcaatttggatcCGGAATTTTTGTGCAGCTGCGATTGCACGGACGATTGTCAGgACAAATCAAAATGCCAATGCTGGCAATTGACTATTCAGGGTGCTACACTAGGTGGTCAAGTTCTGAACAACGAGGTCGGTTACGTCTACAAGAGGTTACCGGAGCCCGTTACAACGGGAATTTACGAGTGCAATTCGAGATGCAAGTGCTCCATTAAAACGTGTTTAAACAGGGTCGTTCAGCATTCTCTAACTCTCAAGCTTCAAGTATTCAAAACGGCACCGCGGGGTTGGGGAATCCGATGTCTCAATGATATTCCTCTTGGATCTTTCATCTGTATTTATGCCGGAAGACTCCTCACCGAGCAGGGAGCGAACGAAGGAGGGAAAAATTACGGCGACGAGTATCTCGCCGAGCTCGATTACGTGGAGGTTGTCGAGGGAATAAAGGAAGGCTACGAGAACGATGTATTGGATCCCGAAGGTCCAATGCAAGAACAATCGACGAAAACTGGAAAGACCACAGTGGAACAGAGCGACGACGACATAACTGGGAAAAAAACTGGCGGAGATTCCGACGAGGATTTTAATATAAAACTTCACAAGGGTTTCGCCGAGCTTGAGCTTGAAACAGAATCTTCGTCATCCATAAGAAAACGACTGAGGAAGCGTAAGAAGAGCGAAGAGAACAGCGGACAGGATGGTTCAGAGGATCGTAGCGAGGATGGTAGTGTGACAAAAGGCTCGGAATCATCGACGATCAAATCAACCGGTCAAGATACACAAGAGATATTGATAAGCGACGATGAGGACACGAATACGACGGGTCGACGAGAACCGAGCAGATTCGAGCCAAATCTCGAGCCCACCGAGGTGAAGAGACCGGCATTGAAATCCGTTCGTGATTTCTTCGGAGAGGACGAAGCGGTCTATATAATGGATGCTAAAACAACGGGAAATATAGGACGTTACTTAAACCATTCTTGTGATCCAAACGTTTTCGTTCAAAATGTATTTGTCGACACTCACGACGTTAGATTCCCGTGGGTGGCGTTTTTCGCACTAAACTACATAAGAGCGGGTCAAGAATTAACATGGAACTACAGCTACGACGTTGGAAGTATACCGGGTAAAGTGATTATATGTCGATGCGGTGCATCAAATTGTCGCGGACGTTTATTGTAA
Protein Sequence
MSRIEEAEIIDLDSDEDPSSKKANNKPAKRCNNCINFKCMSGVDLKTAPSFACAFYGVNPVKKRKRSICQQCFNIAMEHQETLAAALHNRTPILNCEFPDHTMEVEISDSEESDGEKKEMLDVSGDYLPEDFLLDIEQKMDTALTNVFEKYDIEYQLTSSHKLLKFEWNAISDKNRALDNEILSMIKKMDSLRNSLYSSCAPDIRMLEELQISDPPSTKPPILAPKSSPIKPATQGPLVTADCEVTPLHAVNRSLGYDLPPQGPFFKESLEIDSRVFVMKHPLMPWVRGKVQQIIARGPLQCRVKLSGRRSNGAVRTVIGKHMASDLPCSVVIPVATRVVAVFLDANSSDYYSGVIAEPPKSTNRYRYLVFFDDGYAQYVLHKYICIVCENSSRVWEDIPAESRDFVKKYLETYPERPMVKLLPGQVVKTEWNGKWWIARVVQVDGSLVQMHFDADDRTEWIYRGSARLGPLYLELLKANARQQGHHASANTPSRHRLPLPTNKNNVPYVEYTSFNPELESEQSNDATANDNAKSETTSGGKSVTAIAAAMTATPTTPVPPQSRAVAKKSTTRRQSSADTTGTYVPTTENKPSHSIVYYQTQNKIQTRKFVVHKCGPNCVKGITFTPDDLKGYSPLSIPLLCGWNRQLCKFPKGKKVTLYQAPCGVRLRNMEELHKYLRITRSPMSVDLFDFDYWVHCLAEFVLDKCFVNIKDLSYGVENVPIPCVNEIDHALPDTIRYSTQREPTEGVNINLDPEFLCSCDCTDDCQDKSKCQCWQLTIQGATLGGQVLNNEVGYVYKRLPEPVTTGIYECNSRCKCSIKTCLNRVVQHSLTLKLQVFKTAPRGWGIRCLNDIPLGSFICIYAGRLLTEQGANEGGKNYGDEYLAELDYVEVVEGIKEGYENDVLDPEGPMQEQSTKTGKTTVEQSDDDITGKKTGGDSDEDFNIKLHKGFAELELETESSSSIRKRLRKRKKSEENSGQDGSEDRSEDGSVTKGSESSTIKSTGQDTQEILISDDEDTNTTGRREPSRFEPNLEPTEVKRPALKSVRDFFGEDEAVYIMDAKTTGNIGRYLNHSCDPNVFVQNVFVDTHDVRFPWVAFFALNYIRAGQELTWNYSYDVGSIPGKVIICRCGASNCRGRLL