Onub013892.2
Basic Information
- Insect
- Ostrinia nubilalis
- Gene Symbol
- -
- Assembly
- GCA_963855985.1
- Location
- OY979743.1:11367918-11381398[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.96 1.4e+03 0.4 0.1 19 26 422 429 416 434 0.88 2 17 8.6 1.2e+04 -2.7 0.0 18 27 449 458 444 464 0.81 3 17 0.032 45 5.1 2.0 13 30 485 503 477 512 0.72 4 17 0.0065 9.2 7.3 1.7 6 38 507 539 504 545 0.77 5 17 0.032 45 5.1 3.1 5 33 534 558 532 568 0.81 6 17 0.0053 7.5 7.6 4.3 19 38 575 595 570 597 0.92 7 17 0.0073 10 7.2 1.7 14 37 598 622 595 624 0.81 8 17 0.035 49 5.0 1.3 17 33 629 646 622 652 0.72 9 17 0.022 32 5.6 3.4 5 38 646 679 642 679 0.78 10 17 0.075 1.1e+02 3.9 3.8 5 30 674 699 672 728 0.83 11 17 0.0073 10 7.2 0.2 5 29 722 745 718 753 0.83 12 17 0.019 26 5.9 1.2 18 38 754 775 750 776 0.83 13 17 0.007 9.9 7.2 0.2 5 29 770 793 768 802 0.81 14 17 0.23 3.3e+02 2.3 0.1 18 29 802 813 796 820 0.82 15 17 0.008 11 7.0 0.1 17 29 820 832 817 841 0.83 16 17 0.019 26 5.9 1.2 18 38 841 862 834 863 0.84 17 17 0.0061 8.7 7.4 0.4 5 30 857 883 854 889 0.80
Sequence Information
- Coding Sequence
- ATGAATCCTGAACACCATAGTATGAATACGGGTGGTGGCCAACCTCCTGGAAGTTCGGAGTCGCAGAGCCAGAGAGTTCAATCTGCGCAGCAACAGCAGCAGGGCAATAATTTGCCCGCGACAACCTCTGCGACGGATTTGCGAGTGAATTCCGCGGCCGTGAACGTCGCTTTGTCTAGCGTCGCCAAATACTGGGTGTTTACAAATTTATTTCCCGGACCTATACCACAAGTTTCCGTGTACGGTTTGCCTACTGGCGCCAGGATTGAAAATGGGAAACCAGTCCAGGACCTAGGTCAACATGCTAGCATACTCAATGGTGATCCAAATATCATTTTGGGGCACCATGGAGGCCAACAGCAAGTTACAGTGTCAGCCGCTGGAGCACAACAAATACCTGTATCTCAAATTATTGCAACACAATCAGGACAAACACATGAAGCATTGGTGGCTCACAACCAACAGCAGGAGCTGGCGCAGCAAGCAGCCAACGCTGCTCAGGTCACAGTTAGTGCGGGTCAACCACACCAGCAGGTACCCAATAACCGGGTCGAGTTTGTACAACACCATAACATTGATATGGTAAATCACGTGGGGCATCATTCACAACAACACTTAATGCAGCAGCAACTAATGGCGGCTGCCCGTCCGGATCACTCAAATCAGCagATACAGCTGACAGTCAGCGAAGATGGAATTGTCACGGTGGTGGAGCCAGGAGGCGGCAAACTGGTTGACAAGGAGGAACTCCATGAAGCCATCAAAATGCCCACAGACCACACCCTCACTGTGCATCAGTTACAACAGATCGTTGGACAGCAGGTGTTAGACAGCGTAGTCCGCATAGAGCAGGCTACAGGAGAGCCAGCGAATATACTCGTGACTCACAATCCGGACGGGACAACCTCCATAGAAGCGAGCGCCGGCGAACAGCTCATAGTGAAAGACGAGAAAAGCGTCGGCAAAATCGAGACAGCGCAGTATGCTGAAATCAAGGACATTAAAGGATTAGATTTAAAGAGTGTCAACGCAATGGGGATGGAGGGTGCGGTGGTGAAGATATCTGGAGCCAACGAGCATGACCTTCACGCCATGTACAAGGTCAATGTGGAGGACCTCTCACAACTGCTAGCCTATCACGAGGTGTTCGGGAAACTGAACGCGGACGGGCAGCCTCAGGCTAAGGTGATAAGCGAAGTTGAAGTAGAGGCCGGAACAAGCGCTGGAATGTCAGAAGCGGAGTCCTCGCCAGGCCATCACGCTTGCGATATCTGTGGCAAGATATTCCAGTTCCGATATCAGCTGATCGTCCATAGACGATATCACGGGGAGAGTAAACCATTTACATGTCAAGTTTGTGGTTCCGCCTTTGCCAATCCGGTCGAATTATCAAGACATGGGAAGTGTCATCTTGCCGGGGATCCCACTGAGCGACACACGAAGAGGTTGACGCAGGACAAACCGTACGCCTGCACCACTTGCCACAAGACTTTCTCGCGCAAGGAGCATCTGGATAACCACGTGCGCAGCCACACCGGAGAAACGCCATACAGATGCGAATTCTGCGCCAAGACATTCACCCGCAAGGAGCATATGGTGAACCACGTCCGGAAACACACGGGCGAGACGCCGCACCGCTGCGAGATTTGCAAGAAAAGCTTCACCAGAAAAGAACACTTTATGAACCACGTCATGTGGCACACAGGTGCAACTCCACACCATTGTACATTATGCGGTAAGAAGTATACTAGGAAGGAGCATTTAGTGAACCATATGAGATCGCACACAAACGATACGGCGTTTCGATGCGACCTGTGCGGCAAGTCGTTCACAAGAAAGGAACATTACACCAATCACATAATGTGGCATACCGGCGAGACCCCACACCGTTGCGACTTCTGCTCGAAGACATTCACCCGCAAGGAACACTTATTGAACCACGTCCGTCAACATACTGGCGAATCTCCTCATCGCTGCAATTTTTGTTCTAAATCGTTCACGCGGCGCGAGCACCTCGTGAACCACGTGCGACAACACACCGGCGAGACGCCCTTCCAGTGCGGATACTGTCCCAAAGCGTTCACAAGGAAGGACCACCTCGGCGAGGAGCTAAGCCGTTGCTACTTCTGCTCCAAGTCTTTTATACGGCGCGAGCACCTCGTCAACCACGTGCGACAACACACCGGCGAGACGCCCTTCCAGTGCGGATACTGTCCCAAGGCGTTCACCAGGAAGGACCACCTCGGCCAGGAGCTAAGCCGTTGCAACTTCTGCTCCAAGTCGTTCACGCGGCGCGAACACCTCGTCAACCACGTGCGACAACACACCGGCGAGACGCCCTTCCAGTGCGGATACTGTCCCAAGGCGTTCACAAGGAAGGACCACCTCGGCGAGGAGCTGAGCCGTTGCGTCTTCTGCTCCAAGTCGTTAACGCGGCAGGAAAATCTCGTCAACTATATGCAGTGCAGATACTGTCCCAAAGCGTTCACCAGGAAGGACAACCTCGGCCAGGAGCTAAGCCGTTGCAACTTCTGCTCCAAGTCGTTCACGCGGCGCGAACACCTCGTCAACCACGTGCGACAACACACCGGCGAGACGCCCTTCCAGTGCGGATACTGTCCCAAGGCGTTCACCAGGAAGGACCACCTCGGTAACAAACAACTCTGGCTCCTAGACTAA
- Protein Sequence
- MNPEHHSMNTGGGQPPGSSESQSQRVQSAQQQQQGNNLPATTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTGARIENGKPVQDLGQHASILNGDPNIILGHHGGQQQVTVSAAGAQQIPVSQIIATQSGQTHEALVAHNQQQELAQQAANAAQVTVSAGQPHQQVPNNRVEFVQHHNIDMVNHVGHHSQQHLMQQQLMAAARPDHSNQQIQLTVSEDGIVTVVEPGGGKLVDKEELHEAIKMPTDHTLTVHQLQQIVGQQVLDSVVRIEQATGEPANILVTHNPDGTTSIEASAGEQLIVKDEKSVGKIETAQYAEIKDIKGLDLKSVNAMGMEGAVVKISGANEHDLHAMYKVNVEDLSQLLAYHEVFGKLNADGQPQAKVISEVEVEAGTSAGMSEAESSPGHHACDICGKIFQFRYQLIVHRRYHGESKPFTCQVCGSAFANPVELSRHGKCHLAGDPTERHTKRLTQDKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGATPHHCTLCGKKYTRKEHLVNHMRSHTNDTAFRCDLCGKSFTRKEHYTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLGEELSRCYFCSKSFIRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLGQELSRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLGEELSRCVFCSKSLTRQENLVNYMQCRYCPKAFTRKDNLGQELSRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLGNKQLWLLD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01071806;
- 90% Identity
- iTF_01125673;
- 80% Identity
- iTF_01125673;