Oinc021913.1
Basic Information
- Insect
- Orthosia incerta
- Gene Symbol
- -
- Assembly
- GCA_948252205.1
- Location
- OX411754.1:11464743-11473656[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 3.1 4.3e+02 3.0 0.9 1 23 54 77 54 77 0.94 2 20 0.086 12 7.9 4.1 1 23 84 107 84 107 0.97 3 20 5 6.8e+02 2.3 4.0 1 23 191 213 191 213 0.96 4 20 0.0017 0.23 13.2 1.0 2 23 219 240 218 240 0.97 5 20 2.1 2.8e+02 3.5 1.4 1 23 246 268 246 269 0.94 6 20 0.2 28 6.7 3.4 2 22 498 518 497 518 0.95 7 20 0.085 12 7.9 2.6 1 23 615 637 615 637 0.95 8 20 0.59 81 5.2 0.3 2 23 775 796 774 796 0.96 9 20 0.0011 0.15 13.8 0.5 2 23 876 897 875 897 0.96 10 20 0.13 18 7.3 0.3 1 23 905 927 905 927 0.97 11 20 5 6.8e+02 2.3 2.6 1 23 964 986 964 986 0.93 12 20 0.00024 0.033 15.9 4.0 1 23 994 1016 994 1016 0.99 13 20 0.4 55 5.8 1.9 1 23 1100 1122 1100 1122 0.97 14 20 0.02 2.7 9.9 0.3 1 23 1178 1200 1178 1200 0.97 15 20 0.037 5 9.0 2.5 1 23 1299 1321 1299 1321 0.95 16 20 0.0058 0.8 11.5 0.9 1 23 1327 1349 1327 1349 0.95 17 20 0.0067 0.92 11.4 2.6 1 23 1439 1461 1439 1461 0.97 18 20 0.00017 0.023 16.4 1.4 1 23 1467 1489 1467 1489 0.99 19 20 0.83 1.1e+02 4.8 2.7 1 23 1580 1602 1580 1602 0.96 20 20 0.0097 1.3 10.8 5.6 1 23 1613 1635 1613 1635 0.98
Sequence Information
- Coding Sequence
- ATGCTACAGCAGATGTCCTCGCCGCCGCGCGCACAAGTCGGCGAGGTCGCGACTATCGTGCGCCACCTTGAAGGCCGCGTCTACGGCGACGTGTCTTCGGAGGCTTCCTCGGACGCCGCCGAAGATTTTGAATTACCACAGTGCAAGATAAGGAGGAATTATAATTGCACCAAGTGCACGTTCTACACGCAGAACCCGCGCGCTTATCTCGTCCACACGCGTGACGCTCACTTCGTCAGACTCAAGATTTATGATTGTCCACACTGTGTTTACGCTTCGAGACATCATCAAAAACTTATAAGACACGTCAAAATGGTTCACGGAGCATCAAAACCTACTGCAACGACTGTTAAAGTGGAAGAACTATCACCTCCCCCCAACGATAACATGGAGCCAGCAGAGCGCATCGAAGACATGCTCGAGGAAGTCGAGGACTGCGAGGAGATGATGATGGAAGTTGATGAGGACTCCATGGACCAACCTGATGATGTCGACGGCGACTGCGACAGAAGTGTAGAGTTAGGATCGCCCTATCGTAGGGCACGTCTATCAAAAGCTAAAGGCAAATTCTTCTCATGCGATAAGTGTAACTATGTCACCCATATAAGAGCTAGATTCACAAAGCACGTCAAGTATCATTCGATGCCTATGATCAAGTGTACAATGTGTGATTTTCGAACACCGTACAAGTGGAATTTGGACCGCCACATGAAGAACCACGGTGGAAGTGGAAGTTTCAATTGTTCGATGTGCAACTTCACGGCGGACATCAAGCAGAGTCTGACGGTGCACGAAATGAATCATCACACACCGGCAGCGGGCCAATCGTTGCCGAGTCGCCGCCGCAACCGGGTGGGCGCCAGCGACACGGTTATCGCGGAGTTCGACGCAGCGAGCGCGTTGCTCCCCAAGGAGGAAGAAGGGAGCGGCGACTCGCAGTCCTCACACTCGGTCTCGGACATGGGGCTCCAATACGCAGAAAGAGAACTAGTCAGTTGCAAAAGTGATTCCAACGACGGTACAACTGATGCAATCACCAATCGAAAGGAGACTTCGCAAGATGGATACCACCTTTCACCAACCCACAGCGCAGACGAGAAGCAAAAACAAAGCAGAAAGATTCCCAGGCCAATACCACAACTCATACCGTTAAACTCATCAACACCTAATCAAAAACAAACGTGCTCTGGTGAACCACCACAGAAAAAGTTCAAGGAATCCGTCGACAGCGATGAGTTTTCTGCTGAAAATACCCTCTTACCAGCAAACCCAGCAATAAAAGAGACTGCAGGTCGAAAGAAAAATGAATCATTTTTCGACAGATTAAAAGAAAGACTGCTTACAGAAACAGGCGAAGAAGGTTCACTGATATGTAAGATCTGTGGATTTGAAAGTAAATGCTTATCAGAACATTCTGTACACGAGAAAAATTGTTCTCCACAAACGAATCGGATCAATGCAAACACGTCGGTTAAAAGTTTAAGTTCCACTCGATGTCAGAATTGTAGACACAGGTGTAAGTCTAGTGCAGACTTGTACATTCACATGCAAACTTGCGGTAAAAGCGAAACGGCCGACCATGAGACCACTATAAAAATTGACAATAGTAATGATGGAGTCATTCCAATCCATGAAACAGAGACTGAGCCCCATCCAATGGAAAACGTCGTTTTCGTTTGGAACAATATTAATCATGACTCTAACAAGTTTGATATACCTCTAGACATAAATATAAATGATGATTCCACTCTACCAGAAATACATCGAAGTTTTGAGGCTGAGATTGTTGATGACAGTGAAAGCATGAATCTATCGCCGAGTCAAGCTATCGGAAGGAAGGTATTTAAATGTCCACATTGTCCATTTTTCTCCACAACAGCATCCAGATTTCACGTTCATATCGTGGGGCACTTAAACAAGAAGCCGTTTGAGTGTTCGCTCTGCAAATACAAATCTAATTGGAGATGGGATATAACTAAACACATTAAATTGAAATCCGCGAGGGATCCCGAGCATAATGAAGCAAAAGTGCTTATGACCGATGAAACAGGAAGACGAAACTATAGCAAATACAATAAATTTTTAGCAATGCCTGTTTTAAATGAAAATGGTGAAAATGAGTTCCATTATTTGGATCCTAACACTGCAGTCGATAGCACGATGGAAATTGATGAATCATTTAATGATATGTCAGACCATATGAATGTACAATTTGAAATGCAACCGCTTAACTTACAGACGCAACACATTGAAGATAATTATAACAACTATATTGATAATAGAGGTCTCAACGATATGAAGAAGCCCAAGAAAACATTATGGAAATGTAAAAAGTGCAATTACAAAGATCCCTCAAAAGAAGCGCTTTTAGAGCATGTTCGTGAGCACTCCAGAGCGGAAGGCTTCCATGACGAGACAATGAAACCCTCTCTTAAGAAACCTGAAAATAATACTCCCGACCCAGCAGATCTGGCGTATCGTTGTGGCCATTGCAATCAACTCTCTAATTGGAAACATGTCATCCAGCGCCATTGCCGATTAAAACATGAAGGAGTGATCAAAGTGATAACTACAGTTAAGCCAAAACCTGACCCACCAATGAACATCAATGAGATCAATATTGATACATGCAACAAATGTCCGTACAGAACGAGTGACAAAAAGCTACTCATCGCTCATTTACAACAGCATCAGCCCTCGGCGAATTCTATTTTCAAGTGCTACTTCTGCCCGTTCTTCGTAAAGGATGAGCCAGAATTAATTCAACATCTACTCCTGCACGGCATCACTGATCCAGAAGATTACATCGCAAAAGCAATGGGAACTAAATCTCCAGGACCACCTGAACCGCAAGCTCCTGTTACCACGTCATTAAACTCCACCAAGCGTCACAAATGCATAGAATGTCCATACGAAACAAACAGTAAGTCACAATTCATGTATCACGAACAATTTCATCGACTTCCGGCGGATACGCCTTACAAATGTCCAGAATGCAACTACAGCGTTTCTAAGAGGCATCTGCTGCACCAGCATCTGCGTGTCCACGGCATCGCCACCAAGAGAACTGAAACCGAGGCCGAATTAGAGGCATCAACATCTGCACAAAACAAGACGGATAAAACGGACTTCCATATAAATCTTGATGAAATACCATTTGTCTGGGTTTCAGCCAAGAACGAGTTCCACAAAATGTACAAGTGCCGATACTGTTCGTACGTTAATGCTATAAAATGTAAAATACCAAATCATGAAAAAATTCATTGCATCGCTTTCGAAAACAGTGATACAACTATTTACAAGTGTTTGGAATGCAAATTCACATGTGATAACGCCGGCAGACTCGCCGAACATTCTAAAAACCATGCTGAAATATATGGTCGCATTTATTGTCCCGTTGAATATGATGTGCCCGATGAAGAACAAATCACAAAATTGAGAAAGGTTATAGAAATTGAAAAATCAGCAAATCCTGAGAGTTTCTCAAGAGATGAAAGTACTACGCACGAAAATAGAGAAATAAAATTATTATATTTTTGTCAAAAATGCCCAGCAAGATTTTTTGATGACGCCGATCTTGAGGTTCATGAAAAACGTCATAGCTGCGATGAAACATTGACCAACAAATGTAAGAGTTGTGACTTTTCAGTCGCCGACGAATTTGAAATTGAATTAGCGGCACATTTTGCTGTACACACAGATGAATATCACACAAAAACGAAGATGCTTAAATTTGTCCACAACTCACATCCATTGCACAGGCCACCCGTGCTAGAGCTAGTACACTGTCCAAAGACTTCACAGATTACCTGGATATCCACTGGCCCAAGTAAAGCTGAACATATTGAAACCCCCGTGAAGAAAATGAGTGATTCCAAACACGTGCCAAAACAATATTGTTGTAGACAATGTCCTGCGAAGTTTTTCAAAAGTTCCGCTCTTACTTACCACATGGGGCTGCATGGAGGTGAAGGCGAACATAAGTGCAAGAAGTGCAACTACGCCGTGAAGAACATTGGAAATCTAGCCAAACATGAAATACTTCACGAAAATGAGAACAAAGGTACAAGTTGCGATTATGAATCTGGTGACGATATGGATTATAAAAATATTCCATTATCGGGCACAGATTTGTTCCAGAGGAAGACTGAGGCTCAGAAAAGAGTTTTAACAGATAAAGATAAGTTAGTTAAGCCGAACGATCATTTCCCGCCTGTCCTACAAGCCGATCCCCAATTCGGTTATCTAATGCATGGCAATCCTGAATTCATATATCCCACGTATCTGAAAAATGGACGCCAAAAAGAAAAACGATACAAATGCCACAAGTGTCCCTCAGCTTTTGAGAAAAGAGAGCAATATAAGATTCATTTATCATTGCACGGCTCCAAGCAAAGATATAAATGTGAGTTGTGCGATTATTCAGTAAAATATTACGCCAATTATGTTCAACATATGCGAAAACATCAAATGAACGATGAAGCTCAAGCTGAAAGGAAGAAAGATAACAATGATTTTACAGAATCAGAACATCAAGAAGATGTAAAGCAAGACGATAGCAGTGATAACATTAAACTTGCAATAAAAACGATGCCAAAAGGAGCAGCTAAGAGCGACTTTCAGCAATTCTCTATTAGCGACCAACAAACGCTGAGACTGCTACAGAGGAGACGGTCAATGAATAATTCTGGAAACCAAAACGCTTCTGAAACTTCGCCGATCAAAGAACGTAAAATGCACATGTGTCTTTTATGTCCCTACACCAATCAACGTCAAGATTCTTTGAGCAATCATTACAGGAGGCACGGTGACACCGACGTCCTGAGCGGAGGCAGTCATAAATGTTCACATTGCGACCTAGTGGTTGTTCAGTCGCATTTCCTTCGGGAACATCTCAAGACACACTTTAACTACCACAAAACTCTAATTCCCGAATGTTTTGTGGCTAGTGAAGCTGTTAGTTTTACTATAACCAAGTTGGATGAAGAAAGTGAATCAGTTGATCTCAAATTAGACATGCAGAACAAGAGTTATGCATGTAACGATGAACAGATATTTGTGAAAATTAAAACAGGAGAGCTAATGGTGGAATAA
- Protein Sequence
- MLQQMSSPPRAQVGEVATIVRHLEGRVYGDVSSEASSDAAEDFELPQCKIRRNYNCTKCTFYTQNPRAYLVHTRDAHFVRLKIYDCPHCVYASRHHQKLIRHVKMVHGASKPTATTVKVEELSPPPNDNMEPAERIEDMLEEVEDCEEMMMEVDEDSMDQPDDVDGDCDRSVELGSPYRRARLSKAKGKFFSCDKCNYVTHIRARFTKHVKYHSMPMIKCTMCDFRTPYKWNLDRHMKNHGGSGSFNCSMCNFTADIKQSLTVHEMNHHTPAAGQSLPSRRRNRVGASDTVIAEFDAASALLPKEEEGSGDSQSSHSVSDMGLQYAERELVSCKSDSNDGTTDAITNRKETSQDGYHLSPTHSADEKQKQSRKIPRPIPQLIPLNSSTPNQKQTCSGEPPQKKFKESVDSDEFSAENTLLPANPAIKETAGRKKNESFFDRLKERLLTETGEEGSLICKICGFESKCLSEHSVHEKNCSPQTNRINANTSVKSLSSTRCQNCRHRCKSSADLYIHMQTCGKSETADHETTIKIDNSNDGVIPIHETETEPHPMENVVFVWNNINHDSNKFDIPLDININDDSTLPEIHRSFEAEIVDDSESMNLSPSQAIGRKVFKCPHCPFFSTTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNEAKVLMTDETGRRNYSKYNKFLAMPVLNENGENEFHYLDPNTAVDSTMEIDESFNDMSDHMNVQFEMQPLNLQTQHIEDNYNNYIDNRGLNDMKKPKKTLWKCKKCNYKDPSKEALLEHVREHSRAEGFHDETMKPSLKKPENNTPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHEGVIKVITTVKPKPDPPMNINEINIDTCNKCPYRTSDKKLLIAHLQQHQPSANSIFKCYFCPFFVKDEPELIQHLLLHGITDPEDYIAKAMGTKSPGPPEPQAPVTTSLNSTKRHKCIECPYETNSKSQFMYHEQFHRLPADTPYKCPECNYSVSKRHLLHQHLRVHGIATKRTETEAELEASTSAQNKTDKTDFHINLDEIPFVWVSAKNEFHKMYKCRYCSYVNAIKCKIPNHEKIHCIAFENSDTTIYKCLECKFTCDNAGRLAEHSKNHAEIYGRIYCPVEYDVPDEEQITKLRKVIEIEKSANPESFSRDESTTHENREIKLLYFCQKCPARFFDDADLEVHEKRHSCDETLTNKCKSCDFSVADEFEIELAAHFAVHTDEYHTKTKMLKFVHNSHPLHRPPVLELVHCPKTSQITWISTGPSKAEHIETPVKKMSDSKHVPKQYCCRQCPAKFFKSSALTYHMGLHGGEGEHKCKKCNYAVKNIGNLAKHEILHENENKGTSCDYESGDDMDYKNIPLSGTDLFQRKTEAQKRVLTDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKDNNDFTESEHQEDVKQDDSSDNIKLAIKTMPKGAAKSDFQQFSISDQQTLRLLQRRRSMNNSGNQNASETSPIKERKMHMCLLCPYTNQRQDSLSNHYRRHGDTDVLSGGSHKCSHCDLVVVQSHFLREHLKTHFNYHKTLIPECFVASEAVSFTITKLDEESESVDLKLDMQNKSYACNDEQIFVKIKTGELMVE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01231174;
- 90% Identity
- iTF_00726922;
- 80% Identity
- -