Oinc010124.1
Basic Information
- Insect
- Orthosia incerta
- Gene Symbol
- retn
- Assembly
- GCA_948252205.1
- Location
- OX411745.1:19595715-19602389[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.3e-21 1.4e-17 65.2 0.0 8 89 19 98 15 98 0.93
Sequence Information
- Coding Sequence
- ATGGAACATCAGCACACAGGAGCAACCCGTAATACCGGCAGGCGTGAACAGAGACAGCTTGTAACTCGATATCGAGCGCGCGGCACTCCAATCAACCGTCTGCCGATAATGGCGAAGTCAGTGTTGGACCTGTACGAGCTTTACAACCTGGTGATCGCTCGCGGTGGCCTGGTCGAGGTTATCAATAAGAAACTGTGGCAGGAGATCATCAAGGGGCTGCGTCTGCCGTCCTCCATCACATCTGCTGCCTTCACACTACGTACACAATACATGAAATACCTGTATGACTACGAGTGCGAGAAAAAGAATCTCTCGACCAGGAATGAGCTGGATGCAGCCATTGAAGGCAATAAGCGCGAGGGTCGCCGCGCCTCTGGACAATACGAGGCACAAGCTGCATTAGCTATGCCACTAAACCGCGTGCCACCATCTCTAACGCAGCTGTCGCAGCACATGCAGCCGCTGTCGCTGTCCCTGGGTGGCGTAGCACCCCGCATGCCGCAGCTACCACCACATATGCCCCACCTCGGCAATCACGAACTCGAGTGCAGGGTGCGCGAGTACATGAAGATTATAAACCACCAGCGGGAGCTCTTGAGAAATGGCTCGGAATCGCCCCCGAACAATGGTACAGCCCCAATAATGTCACCGCGCGACGCAGCTGCCCTTAGTGCCATCGATGTCTCTCGCCTCACTCTCTGGTCACTGTACAATGGACACAGCCCACAACCGGAAATTGAGCCACAACGCGAGGCTCTGAACCTGAGCGAGAGCCCCAACTCGATGAGCAGCAGCGGTGGCAAGCGCGAGGCGTGCCGCTCTCCTCAGCCGCCCGCCAAGCGGCGCCCGCCGCACCACGTGAGCCGGCCCGTGTCGCCACGCTCCGAGCTCCACTCGCCGCCACAGCTTCGCCACAGTCGCAGGGAGGAAACCTCACCGCCACAGACGAACGGCACACCCAATACTAATGGAGTTAATGGAGCTGCCTTCAAGATCACTTCCAGAGGAGATGCGAGCACAGGAGACCAGAAACTAGAAGTGTCAATAGACCTCAATGGCGTTACGTATACAGGAGTACTGTTCCCTTCAGGCAACGGTCTGAACGGACACATATCAATGACTCCAAACTCACACACATAG
- Protein Sequence
- MEHQHTGATRNTGRREQRQLVTRYRARGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRNELDAAIEGNKREGRRASGQYEAQAALAMPLNRVPPSLTQLSQHMQPLSLSLGGVAPRMPQLPPHMPHLGNHELECRVREYMKIINHQRELLRNGSESPPNNGTAPIMSPRDAAALSAIDVSRLTLWSLYNGHSPQPEIEPQREALNLSESPNSMSSSGGKREACRSPQPPAKRRPPHHVSRPVSPRSELHSPPQLRHSRREETSPPQTNGTPNTNGVNGAAFKITSRGDASTGDQKLEVSIDLNGVTYTGVLFPSGNGLNGHISMTPNSHT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029938;
- 90% Identity
- iTF_00111383; iTF_01118041; iTF_01116952;
- 80% Identity
- -