Ogra018259.1
Basic Information
- Insect
- Orthosia gracilis
- Gene Symbol
- retn
- Assembly
- GCA_947562075.1
- Location
- OX387273.1:37536239-37543998[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-19 3.9e-16 60.0 0.0 17 89 48 118 42 118 0.94 2 2 2.9 6.9e+03 -1.7 0.0 19 32 188 202 165 204 0.61
Sequence Information
- Coding Sequence
- ATGTACTTGATAAGATGTGTTTCAGTAAAAGAATACGAGAGTGATCTTCTGGGTATAGAAGAGGTGCACAATGGTTTTACTGATGATGCTACTGTTTATAGATTGACAGTCATACCCATCCCATCCAATAACAAAATACCAGGCACTCCAATCAACCGTCTGCCGATAATGGCGAAGTCAGTGTTGGACCTGTATGAGCTTTATAACCTCGTGATCGCTCGCGGTGGCCTGGTCGAGGTCATCAATAAGAAACTGTGGCAGGAGATCATCAAGGGGCTGCGTCTGCCATCCTCCATCACATCTGCTGCCTTCACACTACGTACACAATACATGAAATACCTGTACGACTACGAGTGCGAGAAAAAGAATCTCTCGACCAGGAGTGAGCTGGATGCAGCCATTGAAGGCAACAAGCGCGAGGGTCGCCGCGCCTCTGGACAGTACGAGGCACAAGCTGCATTAGCTATGCCACTAAACCGCGTGGCACCATCTCTAACGCAGCTGTCGCAGCACATGCAGCCGCTGTCGCTGTCCCTGGGTGGTATGGCACCCCGCATGCCGCAGCTACCACCACATATGCCCCAAATCGGCAATCACGAACTCGAGTGCAGGGTACGCGAGTACATGAAGATTATAAACCACCAGAGGGAGATCATGAGAAATGGCTCCGAATCGCCCCCCAACAATGGTACAGCCCCAATAATCTCACCCCGCGAAGCAGCTGCTCTAAGTGCCATCGATGTCTCTCGCCTCACTCTCTGGTCACTGTACAATGGCAACGGCCACAGCCCACAACCGGAACTTGAACCACAACGCGAGGCTCTGAACCTGAGCGAGAGCCCCAACTCGATGAGCAGCAGCGGCGGCAAGCGCGAGGCGTGCCGCTCTCCTCCGCCGCCCGCCAAGCGGCGCCCGCCCCACCACGTCAGCCGGCCCGTGTCGCCACGCTCCGAGCTCCACTCTCCGCCACAGCATCGCCACAGCCGCAGGGAGGAAACCTCACCGCCACAGACGAACGGCACGCCCAATACTAATGGAGTTAATGGAGCTGCCTTCAAGATCACCTCGAAAGGAGATGCGAGCACAGGAGACCAGAAACTAGAAGTGTCAATAGACCTCAATGGCGTGACGTACACAGGAGTACTGTTCCCCTCAGGCAACGGTCTGAACGGACACATATCAATGACTCCAAACTCACATACATAG
- Protein Sequence
- MYLIRCVSVKEYESDLLGIEEVHNGFTDDATVYRLTVIPIPSNNKIPGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYEAQAALAMPLNRVAPSLTQLSQHMQPLSLSLGGMAPRMPQLPPHMPQIGNHELECRVREYMKIINHQREIMRNGSESPPNNGTAPIISPREAAALSAIDVSRLTLWSLYNGNGHSPQPELEPQREALNLSESPNSMSSSGGKREACRSPPPPAKRRPPHHVSRPVSPRSELHSPPQHRHSRREETSPPQTNGTPNTNGVNGAAFKITSKGDASTGDQKLEVSIDLNGVTYTGVLFPSGNGLNGHISMTPNSHT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029938;
- 90% Identity
- iTF_01119062;
- 80% Identity
- -