Onob000503.1
Basic Information
- Insect
- Orthonevra nobilis
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_963555765.1
- Location
- OY743224.1:3504675-3515658[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.037 9.8e+02 -0.6 0.3 167 204 3 38 1 76 0.71 2 3 2.3e-114 6.1e-110 367.8 33.4 1 299 148 438 148 439 0.93 3 3 0.095 2.6e+03 -2.0 4.4 220 244 467 491 441 513 0.46
Sequence Information
- Coding Sequence
- ATGTCGGAAGTGTTGAAACAATCAAACGGATTGATCAACGATCAACAAATCGTGAAGGAGGAGAATAATAATAGTGAGAATTTGAAAAAGTCCCAAACTTCGGATTATGATGAAATCGGTGAGGAATTCGATTTTAGCGATAGTGAATTGAGTTCTTTGAATGATGAGGATACCGATAAGGTACAATCTAAAAGTGAAGTGGTCGTGGCAAAGCCAACAAATTTAAGCCTTGACGAGGCGAAAAACGTCCAACTCGATGCATTTTGCCCAATTACGCCGCGAAAAATTGTCGATAGCAATGCGAGTGATAAGTTTTCTTCTGTCGGTGGTGGCACGAGCAACAATACAAATGGATTCGACAGCGATGGAATGGACGACGATGTGGCAGAGGAAGACGACGACGAGCTGATTGTACAATTTCTAGGACAAGCTAATCCAATTGCTGAAGCGAGACTGGCAGCCAGACGGCAGGCACGTGCAGAAGCGCGGGAAATTCGCATGCGCGAATTGGAACGCCAACAAAAGGAACAAGAACAAAATGCCGATCGGGTTTTCGATATGCAAACAGCGGCAGGCATTGATCCCCTGGCCAGGTCGCGTCTTACCGCGTCTAGTGTTACCGGTGTGGTTAATTCGGTCCGCGCTAGTTCGATGTCGTCCCGCCGTAGCAGTGAAGATTCCCTGGAGGAGGAAGGCCGCAGCTTACGTGATATTAGGCATGAACTTAAGGACGTTGAGGAACGCTTTAGAAAGGCAATGATAGCCAATGCACAACTAGATAATGAACGAGCCTCACAGTCGTACCAAATTCAATTGCTCAAGGATAAGCTTGAGGAAATGGAAGAATCATTTTCCCAGCTTCAGCGTGAATTCAAAGAGAAGACACGCGAGAGCAATGCATTCAAACGTAACCTTGACAAATTGACCGAAGAGTTGAAACTCGTTCATGGTCAATTAACTGAACGGGACGCACTTATAGCTGAACAGGGTTTGGTTATTGTAGCTGTAGAGAATGAGGATGGCTCAGATGCCAAACGTGCTCTAGTCACTTTAGAGAATGCACAATTGTTAGGTTCTGTACAAGGTTCTCTTGATGTTCGACTTAAGAAATTTAGTGAAGAGAAACAGCAACTTCAAACGGAAGTGCAAAATTTACAGGAACAAttagaaaatgttaaaacacAGGGACGAGGTCGGGGTAACTCTATGAACGGTCCATTGGGATCCGATGACGATTATGAAGCTCAAaGAGAAGCCAATAAAATTATCTCCGATTACAAATATAAACTGCAAAAAGCCGAACAAGAAATTGCTAGTCTACAAGCCAGCTTAGCTAGATCAGAAACACAAGTTATACGATATAAGAGTACAGCGGAAGCCTCTGAGAAAGCTGAAGCTGAGCTAAAAATTGAAAGGAGAAAACTTCAAcgagagaaCCGTGAAGCTATGGAACGACTCGAAGAACTGGAAACATCTAACAATCATCTATTAAAACGACTGGATAAATTAAAGAATGCAAAGAGCGCTCTGCTCAAAGAACTCTGA
- Protein Sequence
- MSEVLKQSNGLINDQQIVKEENNNSENLKKSQTSDYDEIGEEFDFSDSELSSLNDEDTDKVQSKSEVVVAKPTNLSLDEAKNVQLDAFCPITPRKIVDSNASDKFSSVGGGTSNNTNGFDSDGMDDDVAEEDDDELIVQFLGQANPIAEARLAARRQARAEAREIRMRELERQQKEQEQNADRVFDMQTAAGIDPLARSRLTASSVTGVVNSVRASSMSSRRSSEDSLEEEGRSLRDIRHELKDVEERFRKAMIANAQLDNERASQSYQIQLLKDKLEEMEESFSQLQREFKEKTRESNAFKRNLDKLTEELKLVHGQLTERDALIAEQGLVIVAVENEDGSDAKRALVTLENAQLLGSVQGSLDVRLKKFSEEKQQLQTEVQNLQEQLENVKTQGRGRGNSMNGPLGSDDDYEAQREANKIISDYKYKLQKAEQEIASLQASLARSETQVIRYKSTAEASEKAEAELKIERRKLQRENREAMERLEELETSNNHLLKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00315970;
- 90% Identity
- -
- 80% Identity
- -