Onob016302.1
Basic Information
- Insect
- Orthonevra nobilis
- Gene Symbol
- -
- Assembly
- GCA_963555765.1
- Location
- OY743226.1:37698702-37721444[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1e-10 1e-07 32.1 0.0 1 38 498 536 498 541 0.89 2 4 3.3e-13 3.2e-10 40.1 0.1 2 39 553 590 552 593 0.94 3 4 1e-17 9.6e-15 54.6 0.0 1 45 607 652 607 652 0.98 4 4 4.7e-19 4.5e-16 58.8 0.0 1 42 659 701 659 704 0.96
Sequence Information
- Coding Sequence
- aTGAGACCAATTGTCATAGGACAGggTCTTCTACGGACAGCTgaacaattgaaaatcaaaggGCTCTGTGAGACAGCCGAAAGTGTCGATGATATATCGGAGGCGGCAACCATAACAGTATCGGAGAATATTACGCAGACGGTTGTTGGTAACATAGTGAATTCAGCACAGGGTAATGCAATAGTTACAACACATACAATTGCAAACAACACAAATACGCatacaacaacagcaaacataaataatggcaataatattaattcaaatattaatgCTATAGTTACACCACCAACGGCGACATCAACGCCGCAACTAAGAAAATCTCGGGTCAGAAAACGCTCAAAGTCACCGGACAcgaatcaacaacaacaacaacagcagcatcaacagcaacaacatcaacaacagcagcagcaacaacaacagcaacaacaacaacaccatcaccagcaacagcaacaacaccaTCAACAACAGCAAGCAATATTAAGTCAAAATCTTAACACAGCGGCAATTGTTAGCCTGCAACAGACATCGTCAGGCAGCTACATACCAGTCTCTGGTGGTCAAACGATAACGACGACAGCTGTTAGCCAACATACCTCCGAGGACTCTGACACTGATATAAAGCCAAGTGCTcagaaaatttgcaaaaccgAAGCGGCCAACTCACCGACATCGAATAATGGCAGTGTAACTGTCGGACAGGGAACTGCAATAGTGACACAAATCGTAGTAGCACGCGACTCAAAAGATAAAAACATGACCAGTCTAGGAATGGGAATGaacggTGGTATCCTCGGAGTACCAATGGGCTTTTTGGATTTCGCACCTGAGCCGCCAGCTCCCTCAGCAACGCCTGTTACCGTGACGGAGCATGTCGACTTGTCGTGTAATCCCAGTACAGATACCAGAGACTTATCAAATCCCTCCGAAGCGCTCGATATTGACAATCATTTAGCACAACATATGATCCAACCGCTTGATCAATCGCCAATGCATACGATCCACCATCAGTCGTCTACGGGTGATGAGAGTAACTCCAATCTAATTCAGCATATTAAGAGTGAAGTGATTGAAGTGAAAcaacagcatcatcatcatcagcaacagcagcagttgCATGCGCAAGCTTTATCCCAACAAGGACAAtctcaacaacagcaacagcagcaacaacagcaacaacagcatcagcagcaacaacaacagcatcaacagcagcaacagcaacatcaGCAGCATCAAGACATTTCCGGAGCAACTGTAATGGAAATCGATCCCAGTAACATAAAACACGAACCAGGAATGATTATCACACCGGAAATTGTCACCATGATGGCAACGGGTCATATGGATATATACTCAGATGCCAGCGAGGATTCATTGATGATTGCGAATGGTTCCCCAAATGACAATAATGAGCCACACTATACGAATTTGGACCAACCACACGATAAACAAGGTCAGTTTAATGGTCCCAAAACTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTGAAGAATCAAAACATGAGTTTGACGAAAGCCTCGGTGACGTATGGTATTCCATCGACGACATTGTGGCAACGTGCCCATCGCATGGGCATTGAAACACCCAAAAAGGAGGGCGGTACCAAATCATGGAATGAAGATTCATTAAACAGCGCTCTGGAGGCATTGCGAACTGGTCAAATATCAGCAAATAAAGCCTCGAAGGCGTATGGTATTCCGTCCTCGACATTATACAAAATTGCACGACGCGAAGGTATACGATTGGCGGCACCGTTCAATGCGGCGCCAACAACATGGACGCCCGAAGATTTAGAACGTGCACTCGAAGCGATTCGTGCTGGTCATACATCCGTCCAAAAGGCTAGCTCTGAATTTGGTATACCAACAGGCACACTTTATGGTCGCTGCAAGCGTGAGGGTATTGAATTGTCACGCTCCAATCCAACCCCCTGGTCAGAGGATGCTATGAATGAAGCTTTGAATTCTGTTCGAGTTGGACAAATGTCTATCAATCAAGCGGCAATTCACTACAACCTTCCTTACAGTTCGCTATATGGGCGTTTTAAGCGTGGAAAATATGATATTGCCAATACGAGTGCATCGTCGATTAATAACACATCGGGCAACACAAGCGGCAGCATTGAAATAATCGAACATAGTCCAGAGAATTCGTTACACATGTTTCAGCAACAATTCCAATATAGTCCAGCGCCGCAATCAAATCATCAAacccaacagcagcagcaacaacagcaacagcagcagcagcaacaacagcagcagcagcaacaacaacaacagcagcagcaacatcaacaacaccaacaacaacagcaacaaccacAACACATCCATCAACACGTTGTACACATTCAACAACAGCAAACACCACAAcaccatcatcaacagcaacatATCCAACAGCAAGATGTTGTTACCTCAACAAGTCAGGTCCATACCCAAGCTGGACAAATCCAACAAATCTATCATCATCACAGCACACCCGAGAGGAGTTga
- Protein Sequence
- MRPIVIGQGLLRTAEQLKIKGLCETAESVDDISEAATITVSENITQTVVGNIVNSAQGNAIVTTHTIANNTNTHTTTANINNGNNINSNINAIVTPPTATSTPQLRKSRVRKRSKSPDTNQQQQQQQHQQQQHQQQQQQQQQQQQQHHHQQQQQHHQQQQAILSQNLNTAAIVSLQQTSSGSYIPVSGGQTITTTAVSQHTSEDSDTDIKPSAQKICKTEAANSPTSNNGSVTVGQGTAIVTQIVVARDSKDKNMTSLGMGMNGGILGVPMGFLDFAPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPSEALDIDNHLAQHMIQPLDQSPMHTIHHQSSTGDESNSNLIQHIKSEVIEVKQQHHHHQQQQQLHAQALSQQGQSQQQQQQQQQQQQHQQQQQQHQQQQQQHQQHQDISGATVMEIDPSNIKHEPGMIITPEIVTMMATGHMDIYSDASEDSLMIANGSPNDNNEPHYTNLDQPHDKQGQFNGPKTWTQDDMNSALDALKNQNMSLTKASVTYGIPSTTLWQRAHRMGIETPKKEGGTKSWNEDSLNSALEALRTGQISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGHTSVQKASSEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDIANTSASSINNTSGNTSGSIEIIEHSPENSLHMFQQQFQYSPAPQSNHQTQQQQQQQQQQQQQQQQQQQQQQQQQQHQQHQQQQQQPQHIHQHVVHIQQQQTPQHHHQQQHIQQQDVVTSTSQVHTQAGQIQQIYHHHSTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00314183;
- 90% Identity
- iTF_01542127;
- 80% Identity
- -