Oale024055.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ornithoptera alexandrae
Gene Symbol
stc
Assembly
GCA_029030555.1
Location
JARDVY010000303.1:9608964-9619228[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 1.6 2.2e+04 -3.8 1.6 15 19 141 145 140 145 0.81
2 16 0.046 6.2e+02 1.1 1.7 2 10 173 181 173 181 0.92
3 16 0.00022 3 8.5 18.9 4 19 189 204 187 204 0.93
4 16 5.6e-07 0.0076 16.8 11.3 1 18 240 257 240 258 0.98
5 16 1.2 1.6e+04 -3.4 0.2 8 11 263 266 262 266 0.84
6 16 9.1e-06 0.12 13.0 14.2 1 19 299 317 299 317 0.99
7 16 1e-06 0.014 16.0 10.9 1 19 358 380 358 380 0.88
8 16 2 2.7e+04 -4.8 2.2 6 10 410 414 410 414 0.94
9 16 0.0023 31 5.3 7.4 1 11 420 430 420 431 0.95
10 16 0.041 5.5e+02 1.3 0.6 4 10 435 441 434 441 0.92
11 16 2.6e-06 0.034 14.7 14.0 3 19 449 465 447 465 0.92
12 16 2 2.7e+04 -4.3 3.0 7 11 501 505 497 506 0.83
13 16 0.00025 3.4 8.4 9.0 9 18 511 520 509 521 0.92
14 16 1.6e-08 0.00022 21.7 13.2 1 16 557 572 557 580 0.90
15 16 0.00012 1.7 9.4 11.2 1 19 587 610 587 610 0.87
16 16 0.14 1.9e+03 -0.4 0.4 1 12 619 630 619 630 0.70

Sequence Information

Coding Sequence
ATGTCCCAGTGGAATAATTCATACGCATACAACAACCAGTACCAAGGACCACCCAATGGATGGAATGGTGATGTTAATGGTCAATACATGAATCATCCCTATTATGAAGATGAACAGTATGCTAATTCATATATGCAACATAAGGACGATAGAGTTgagaaagttattaaaaacgaAAAGACTGCTAGTCCTAATAGAGGAAAAACCAAAACCAGCAATGACTCGTCAGGTAACACAGCCATGACACAAAGGGAACGTTTGAGTGATCAGCTAGATAAGGGAACACTGGAATGTCTAGTATGTTGTGAACGTGTCAAACAAACTGATCCTGTCTGGTGGTGTTCTAATTGTTACCATGTATTACACCTTAGATGTATTAGAAAATGGGCAATGAGCAGTTTAGTTGAAGGCAAATGGCGTTGCCCAGCATGTCAAAACACAAATGAAGAGATACCAACCGAGTACCGTTGCATGTGTGGCGCGATCAGATCACCAGAATATGCGCGAGGTTCAGTTGGAGCACATACATGTGGGAAGTCCTGTCGTCGGCCAAGAAATTGCCCACATCCTTGCACATTGCGTTGCCATCCAGGACCTTGTCCACCTTGCCAAGCTACCATTAGCAAGCAATGCGGTTGCGGTGCTGAGACGCGTTCTGTACTGTGCAGTAGTAAATTGCCCCAGCTATGTGGTCGCGAGTGCAAACGCATGCTGGCGTGCGGAGTGCACCAGTGCCAACGCGAATGTCACGAGGGCGTCTGTGATGATTGCGCAGAAACAGTCACGCAAATATGCCACTGTCTTGCGGCGAAGTCTCGGTCCGTCCCGTGCACGTCGGAAACGGGCGCGTCGAGCAATTGGTCTTGTGGTGCGGCGTGCGCGCGTGTTCTCCCATGCGGTGCGCACGTGTGCCGGCGCGTGTGCCACCCACCGCCGTGCGCACCGTGCCCACTACGCCCTGAGAACGTACGCTCCTGTCCATGTGGTAACACCAGAATCGAAAAAGATCAACGGAAGTCGTGCAGTGACCCAATTCCTTTATGTGGGAATATCTGTGCGAAGCCTTTACCCTGTGGACCGGAAGGAGACAAGCACTTTTGCAAACAGTTGTGTCATGAGGGTGCTTGCGCAACATGTCCTGACAAGACATTATTGCCGTGCCGTTGTGGCCACTCCAGTCGTGAGGTGCCCTGTTCTGAATTAGCAGAAAACACCAGCAATGTGCTGTGCCAGAAGAAATGTAACAAGAAACTATCTTGCGGTCGCCACCGCTGCCGCACAGTGTGCTGCGCTGCTCAGTCCCACCGCTGTGCTGTCGTGTGTGCGCGTACGCTCTCGTGTCAATTGCATCGCTGCGAAGAGTTTTGTCACACTGGCCACTGTGCTCCTTGTCCACGAGTCAGCTTCGAAGAGCTGCATTGCGAGTGTGGCGCGGAGGTCCTACTGCCACCGGTGCGCTGTGGCACTCGGCCACCAATATGCCACGCGCCGTGCCGACGCGAGCGGCCCTGCCACCACCCGCCGCACCACGCCTGCCACACTGGTGACTGCCCACCCTGTGTTGTGCTCACCACCAAAATGTGCCACGGACAACATGAGgAGCGAAAAACTATCCCATGTTCTCAAGAAGAGTTCTCATGCGGTCTACCGTGCGGGAAACCTCTACCATGCGGGAAGCACACCTGCACAAAGACATGCCACAAAGGCCCTTGCGATACTGAAAAATGTAAGCAGGCCTGCACTGAGAAGCGTGGGGTGTGTGGCCACACGTGCGCGGCGCCGTGCCACGTGAACAACGGGGGTGCATGCCCCAGCAGCTCGCCGTGCAGACGGCTTGTGCGCGCCACCTGCCCGTGCGGCCGGCGCACCGCCGAGCGCACCTGCCACGACAATGCACGTGACTAtgcaaaGATTATGAGTACTTTAGCAGCAACGAGAATGCAAGAGGAGGGATCTGTAGATCTGTCAGACGTACAACGACCTGGTGCAATGTTGAAGACCTTGGAGTGCGACGACGAGTGTCGCATGGAGGCGCGCTCCCGCCAACTCGCGCTCGCGCTTCAGATCCGGAACCCAGACGTGTCTGCGAAACTCGCGCCGAGATACAGCGAGCACGTGCGCGCAACCGCCACTCGTGAGCCCGCCTTCGCGCAGCACGTGCACGACTGCCTCTCCGAGCTAGTGCAACGCGCCAAAAAGTCGAAGCAAAAGACTCGCGCGCACTCGTTCCCGTCTATGAACCGGCAGAAACGGCAGTTCATACACGAGCTGTGCGAGCACTTCGGATGCGAAAGCGTGGCGTACGACGCCGAGCCCAACAGAAACGTGGTGGCAACAGCAGACAAGGAAAAGTCATGGCTGCCGGCGATGAGTGTTCTAGAGGTGCTGGCGCGGGAGGCGGGTAAGAGGCGTGTACCCGGACCGATGCTGCGCTCTCCCGCCACCGCCGCTAACACAGCACCTGTGACCACACCCACAACATCCACCAGTAGGTCGACGGGGGGTTGGGCGACTTTGACCTCCACAAATGCTTGGGCATCTCGAAACCAGCCACGAACGAACGAGAAGCCCAAAGTGGACTATTTCGACAACCCACCAGCCAATTAG
Protein Sequence
MSQWNNSYAYNNQYQGPPNGWNGDVNGQYMNHPYYEDEQYANSYMQHKDDRVEKVIKNEKTASPNRGKTKTSNDSSGNTAMTQRERLSDQLDKGTLECLVCCERVKQTDPVWWCSNCYHVLHLRCIRKWAMSSLVEGKWRCPACQNTNEEIPTEYRCMCGAIRSPEYARGSVGAHTCGKSCRRPRNCPHPCTLRCHPGPCPPCQATISKQCGCGAETRSVLCSSKLPQLCGRECKRMLACGVHQCQRECHEGVCDDCAETVTQICHCLAAKSRSVPCTSETGASSNWSCGAACARVLPCGAHVCRRVCHPPPCAPCPLRPENVRSCPCGNTRIEKDQRKSCSDPIPLCGNICAKPLPCGPEGDKHFCKQLCHEGACATCPDKTLLPCRCGHSSREVPCSELAENTSNVLCQKKCNKKLSCGRHRCRTVCCAAQSHRCAVVCARTLSCQLHRCEEFCHTGHCAPCPRVSFEELHCECGAEVLLPPVRCGTRPPICHAPCRRERPCHHPPHHACHTGDCPPCVVLTTKMCHGQHEERKTIPCSQEEFSCGLPCGKPLPCGKHTCTKTCHKGPCDTEKCKQACTEKRGVCGHTCAAPCHVNNGGACPSSSPCRRLVRATCPCGRRTAERTCHDNARDYAKIMSTLAATRMQEEGSVDLSDVQRPGAMLKTLECDDECRMEARSRQLALALQIRNPDVSAKLAPRYSEHVRATATREPAFAQHVHDCLSELVQRAKKSKQKTRAHSFPSMNRQKRQFIHELCEHFGCESVAYDAEPNRNVVATADKEKSWLPAMSVLEVLAREAGKRRVPGPMLRSPATAANTAPVTTPTTSTSRSTGGWATLTSTNAWASRNQPRTNEKPKVDYFDNPPAN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00840678;
90% Identity
iTF_00181015;
80% Identity
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