Adix000656.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Atrophaneura dixoni
Gene Symbol
stc
Assembly
GCA_018248015.1
Location
DWHX01000101.1:41447-51397[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 3.2 4.6e+04 -3.8 1.6 15 19 141 145 140 145 0.81
2 16 0.093 1.3e+03 1.1 1.7 2 10 173 181 173 181 0.92
3 16 0.00044 6.3 8.5 18.9 4 19 189 204 187 204 0.93
4 16 1.4e-07 0.002 19.7 11.9 1 19 240 258 240 258 0.97
5 16 1.3 1.9e+04 -2.6 0.3 8 11 263 266 262 266 0.86
6 16 0.00038 5.4 8.7 15.2 1 19 299 317 299 317 0.99
7 16 2e-06 0.029 16.0 10.9 1 19 358 380 358 380 0.88
8 16 4 5.7e+04 -4.8 2.2 6 10 410 414 410 414 0.94
9 16 0.0046 65 5.3 7.4 1 11 420 430 420 431 0.95
10 16 0.059 8.4e+02 1.7 0.3 4 10 435 441 434 442 0.93
11 16 5.1e-06 0.072 14.7 14.0 3 19 449 465 447 465 0.92
12 16 4 5.6e+04 -4.1 2.8 7 11 501 505 497 506 0.83
13 16 0.00068 9.6 7.9 9.4 10 18 512 520 509 521 0.92
14 16 3.3e-08 0.00047 21.7 13.2 1 16 557 572 557 580 0.90
15 16 0.00032 4.6 9.0 11.5 1 18 587 609 587 610 0.87
16 16 0.28 4e+03 -0.4 0.4 1 12 619 630 619 630 0.70

Sequence Information

Coding Sequence
ATGTCTCAGTGGAATAATTCATACGCTTACAACAACCAGTACCAAGGACCACCTAATGGATGGAACGGTGATGTAAATGGGCAATATGTGAATCGACCTTATTATGAGGATGAACAGTATGctaatacatatacacaatatAGGGATGATAGAGTAGAGAGAGTTGTTAAAAGTGAAAAGACTGCTAGTCCTAATAGAGGAAAAACCAAAAGCAACAATGACTCATTAGgcAATGCAGCCATGACTCAGAGGGAACGTTTAAGTGACCAGCTAGACAAGGGAACATTAGAATGTCTTGTATGCTGCGAGCGCGTGAAACAAACAGATCCTGTCTGGTGGTGTTCTAATTGCTACCATGTATTACACCttagatgtattaaaaaatgggCTACGAGCAGTTTAGTCGAAGGTAAATGGCGTTGCCCAGCATGTCAAAACACAAATGAAGAGATACCGACAGAGTACCGTTGCATGTGCGGCTCGATCAGGTCACCAGAATACGCCCGCGGTGCTGTTGGAGCGCACACGTGTGGGAAATCCTGTCGTCGGCCAAGGAATTGTCCACATCCTTGCACATTGCGCTGCCATCCAGGTCCTTGTCCCCCTTGCCAAGCCACTATTAGCAAGCAATGCGGTTGCGGTGCCGAGACACGATCTGTACTGTGTAGTAGTAAATTGCCCCAGCTGTGCGGTCGCGAGTGCAAACGCAAGTTGACATGTGGAGTGCACCAGTGCCAACGCGAATGTCACGAGGGCGCCTGTGACGATTGTTCAGAAACAGTTACTCAAGTATGCCACTGTCTTGCGGCGAAGTCTCGATCCGTGCCGTGCACGTTAGAAGTAGGCGCGTGCAGCACGTGGTCGTGCGGCACGGCGTGCGCGCGCGTCCTTCCATGCGGTGCGCACGTGTGCCGACGTGAGTGCCATCCACCGCCGTGCGCTCCATGCCCACTGCGCCCTGAAAACGTGCACTCCTGCCCATGCGGCAACACCAGAATTGAAAAGGATCAACGGAAGACGTGCGTTGACCCGATTCCTTTATGCGGAAACATCTGTGCAAAGCCTTTGCCATGTGGACCAGAAGGAGACAAACACTTTTGCAAGCAGTTGTGTCATGAGGgcGCATGTGCAACGTGTCCCGACAAAACGTTAATACCGTGCCGCTGTGGACACTCGAGTCGAGAGGTGCCCTGCTCCGAATTGTcagaaaatatcaataatgtgCTATGTCAGAAGAAATGTAACAAGAAACTATCTTGTGGCCGCCACCGTTGTCGCACAGTGTGCTGCGCTGCTCAGTCTCACCGCTGCGCTGTTGTGTGTGGGCGCACGCTCTCTTGTCAATTGCATCGCTGCGAGGAGTTCTGTCACACCGGTCACTGTGCTCCATGTCCGCGAGTCAGTTTTGAAGAGCTCCATTGCGAGTGTGGCACCGAGGTCCTCCTACCACCAGTACGCTGTGGAAGCCGGCCGCCAGTATGCCATGCGCCGTGCCGTCGCGAGCGGCCATGCCACCACCCGCCGCACCACTCTTGCCACACCGGCGACTGCCCGCCCTGTGTTGTGCTGACCACCAAAATGTGCCACGGACAACATGAGgAGCGAAAAACTATACCTTGTTCCCAAGAAGAATTCTCATGCGGACTGCCGTGCGGGAAGCCATTACCATGCGGAAAGCACACCTGCACAAAGACATGCCACAAAGGTCCTTGCGATACTGAAAAATGTAAGCAGGCGTGTGCAGAGAAGCGCGCGATATGCGGTCACACGTGCGCAGCGCCGTGCCACGTGGACAACGGCGGTTCGTGCCCTAGCAGCTCGCCGTGCAGGCGGTTGGTGCGCGCGACATGTCCCTGCGGCCGGCGCACCGCAGAGCGCACGTGCCACGACAACGCACGCGACTACGCAAAGATTATGAGTACACTGGCGGCAACGAGGATGCAAGAGGAGGGTTCTGTAGATTTATCAGATGTACAACGACCCAGTGCTATGTTGAAGacACTGGAGTGCGACGACGAGTGCCGCATGGAGGCGCGCTCCCGTCAGCTCGCGCTCGCGCTGCAGATCCGCAACCCTGACGTGTCCGCGAAACTCGCGCCGCGGTATAGCGAACATGTACGCGCAACAGCCGTGCGCGAGCCCGCCTTCGCGCAGCACGTGCACGACTGCCTCTCCGAGTTGGTGCAACGAGCCAAGAAGTCGAAGCAAAAAACCCGCGCGCACTCGTTCCCGTCTATGAACCGACAGAAGCGACAGTTCATACACGAGCTGTGCGAACACTTCGGATGCGAAAGCGTAGCGTACGACGCCGAGCCAAACAGGAACGTGGTCGCAACGGCGGACAGGGAAAAGTCATGGCTGCCTGCGATGAGTGTTTTAGAAGTACTGGCGCGAGAGGCGGGTAAGAGACGTGTCCCCGGACCGGTGCTACGCTCCCCCGCCACTGCCGCTAACATAGCACCCATGATAACACCAACAACATCCACCAGTAGGTCGACGGGGGGTTGGGCGACTTTGACGTCCACAAATGCCTGGGCATCCCGAAGCCAGCCACGACCGAACGAGAAACCCAAAGTGGACTATTTCGACAACCCACCAGCCAACTAA
Protein Sequence
MSQWNNSYAYNNQYQGPPNGWNGDVNGQYVNRPYYEDEQYANTYTQYRDDRVERVVKSEKTASPNRGKTKSNNDSLGNAAMTQRERLSDQLDKGTLECLVCCERVKQTDPVWWCSNCYHVLHLRCIKKWATSSLVEGKWRCPACQNTNEEIPTEYRCMCGSIRSPEYARGAVGAHTCGKSCRRPRNCPHPCTLRCHPGPCPPCQATISKQCGCGAETRSVLCSSKLPQLCGRECKRKLTCGVHQCQRECHEGACDDCSETVTQVCHCLAAKSRSVPCTLEVGACSTWSCGTACARVLPCGAHVCRRECHPPPCAPCPLRPENVHSCPCGNTRIEKDQRKTCVDPIPLCGNICAKPLPCGPEGDKHFCKQLCHEGACATCPDKTLIPCRCGHSSREVPCSELSENINNVLCQKKCNKKLSCGRHRCRTVCCAAQSHRCAVVCGRTLSCQLHRCEEFCHTGHCAPCPRVSFEELHCECGTEVLLPPVRCGSRPPVCHAPCRRERPCHHPPHHSCHTGDCPPCVVLTTKMCHGQHEERKTIPCSQEEFSCGLPCGKPLPCGKHTCTKTCHKGPCDTEKCKQACAEKRAICGHTCAAPCHVDNGGSCPSSSPCRRLVRATCPCGRRTAERTCHDNARDYAKIMSTLAATRMQEEGSVDLSDVQRPSAMLKTLECDDECRMEARSRQLALALQIRNPDVSAKLAPRYSEHVRATAVREPAFAQHVHDCLSELVQRAKKSKQKTRAHSFPSMNRQKRQFIHELCEHFGCESVAYDAEPNRNVVATADREKSWLPAMSVLEVLAREAGKRRVPGPVLRSPATAANIAPMITPTTSTSRSTGGWATLTSTNAWASRSQPRPNEKPKVDYFDNPPAN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00840678;
90% Identity
iTF_01116132;
80% Identity
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