Ipod008881.1
Basic Information
- Insect
- Iphiclides podalirius
- Gene Symbol
- stc
- Assembly
- GCA_933534255.1
- Location
- OW152822.1:12579714-12593760[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.8 1.7e+04 -3.8 1.6 15 19 141 145 140 145 0.81 2 17 0.043 9.3e+02 0.2 0.8 4 10 175 181 173 181 0.91 3 17 1.3e-05 0.27 11.5 18.1 4 19 189 204 187 204 0.93 4 17 9.5e-09 0.0002 21.5 11.8 1 19 240 258 240 258 0.98 5 17 0.8 1.7e+04 -3.8 1.8 8 11 263 266 262 267 0.86 6 17 8.1e-06 0.17 12.2 13.2 1 19 299 317 299 317 0.99 7 17 0.83 1.8e+04 -3.9 0.5 4 6 324 326 324 327 0.81 8 17 5.9e-08 0.0013 19.0 13.4 1 19 358 380 358 380 0.88 9 17 1 2.1e+04 -4.8 2.2 6 10 410 414 410 414 0.94 10 17 0.0011 25 5.3 7.4 1 11 420 430 420 431 0.95 11 17 0.015 3.2e+02 1.7 0.3 4 10 435 441 434 442 0.93 12 17 1.3e-06 0.027 14.7 14.0 3 19 449 465 447 465 0.92 13 17 1 2.1e+04 -4.6 0.7 6 10 494 498 494 499 0.69 14 17 0.00017 3.6 7.9 9.4 10 18 512 520 509 521 0.92 15 17 3.9e-08 0.00083 19.6 13.1 1 17 557 575 557 580 0.86 16 17 0.0009 19 5.6 11.7 1 19 587 610 587 610 0.88 17 17 0.13 2.7e+03 -1.2 0.3 7 12 625 630 625 630 0.84
Sequence Information
- Coding Sequence
- ATGTCTCACTGGAACAATTCATACGCTTATAATAACCAATTCCAAGGACCTCCGAATGCATGGAATACCGATTTAAATGGCCAATACGTAAATCCAGCCTATTATGATGAACAATATGCTAATACATACATGCAATATAGGGATGAGAGGGTAGAGAGAGTTGCTAAAACTGAAAAAGCAGCAAGCCCTGCAAAAGCAAAAAATAAAACTGTAGTGGATCCTCCAGTGGGTAATACGGCAATGACACAGCGTGAAAGATTGACTGAACAGCTCGACAAAGGAACCTTGGAATGTTTAGTCTGCTGCGAAAGAGTTAAGCAAACAGATTCAGTTTGGTGGTGCTCCAATTGTTACCATGTGTTACACCTAAGATGCATCAGGAAATGGGCTACAAGCAGTTTAGTGGAAGGAAAATGGCGCTGTCCCGCTTGTCAGAATACGAATGAAGAGGTTCCGACTGAGTACCGTTGCATGTGTGGCGCGGTACGATCGCCCGAATATTCCCGTGGAACAGTGAGCGCCCACACTTGCGGAAAATCCTGCCGCCGGCCAAGGAGCTGTCCGCATCCTTGTACTCTTCTGTGCCACCCTGGCCCCTGCCCACCTTGCCAAGCCACCATAAGCAAGCAATGCGGATGCGGCGCTGAGACCCGTTCCGTGCTCTGTAGCAGCAAGCTGCCACAGCTGTGCGGTAGAGAGTGCAAACGCACGTTGGCTTGCGGCGTTCACAAGTGCCAACGCGAGTGCCACGAAGGCCTGTGTGATGAGTGTTCCGAAACTGTCACCCAAGTGTGCCACTGCCCCGCGGCGAAGTCGCGCTCGGTGCCCTGCACGGCGGAGACGGGCGCGTGCGCCACGTGGTCGTGCGGGGCGGCGTGCGCGCGCGTGCTCGCGTGCGGCGCGCACGTGTGCCGCCGCGTGTGCCACCCGCCCGAGTGCGCGCCGTGCCCGCTGCGCCCGGAGAACGTGCACACGTGCCCGTGCGGAAACACCAGGATTGAGAAAGGCCAACGCAAATCCTGCACCGACCCCATACCACTTTGCGGCAACATCTGCGCAAAGCCGCTGCCCTGTGGCCCTGATGGAGACAAACATTTCTGCAAACAGCTGTGTCATGAAGGACCATGCCCGACGTGCCCCGACAAAACCCTGCTCCCGTGCCGCTGCGGTCACTCCAGTCGAGAGGTGCCATGCGCTGAATTACCCGAGATGGCCAATAACGTGCTGTGCCAGAAGAAGTGTAACAAGAAGCTGTCATGCGGCCGCCACCGCTGCCGGACCGTCTGCTGCGCCGCCCAGTCGCACCGCTGCGCGGTCGTGTGCGGCCGCACGCTCTCCTGCCAGCTGCACCGCTGCGAGGAGTTCTGCCACACCGGTCACTGCGCCCCCTGCCCCCGCGTCAGCTTCGAGGAGTTGCGCTGCGAGTGCGGCGCGGAGGTGGCGCTGCCGCCGGTGCGATGCGGTGCGCGCGCGCCCGCCTGCAGCGCCCCCTGCCGCCGCGAGCGCCCCTGCCGCCACCCGCCGCACCACTCGTGCCACACCGGCGACTGCCCGCCCTGCGTCGTGCTCACCACCAAGATGTGCCACGGACGCCACGAGGAACGCAAGACAATACCTTGTTCCCAAGAAGAATTCTCATGCGGTCTGCCCTGTGGCAAGCCGTTGCCCTGCGGAAAGCATACATGCGTGAAGACATGCCACAAAGGACCATGTGATACTGAAAAGTGCCGGCAGCCGTGCGCGGAGAAGCGCGCCGGCTGCGGGCACGCGTGCGCCGCGCCGTGCCACGTGGCGGGCGGCGGCGCGTGCCCGAGCAGCTCGCCGTGCCGCCGCGCCGTGCGCGCCACCTGCCCGTGCTCGAGGCGCACCGCCGAGCGCACGTGCCACGAGAACGCCCGCGACTACGCCAAGTTGATGAGCACACTAGCGGCTACGAAGATGCAAGAGGGAGGTTCTGTTGATATTTCTGAGGTACAACGCCCCGGCGCTATGCTCAAAACGCTGGAGTGCGACGACGAGTGCCGCATGGAGGCGCGCTGCCGCCAGCTGGCGCTGGCGCTTCAGATCCGCAACCCGGACGTGTCCGCGAAGCTGGCGCCGCGCTACAGCGAGCACGTGCGCGCGACCGCGGCGCGCGAGCCCGCCTTCGCGCAGCAAGTGCACGACTGCCTCACGGAGCTCGTGCAGCGCGCCAAGAAGTCGAAGCAGAAGACCCGCGCGCACTCGTTCCCCTCCATGAACCGGCAGAAGAGGCAGTTCATCCACGAGCTCTGCGAGCACTTCGGCTGCGAGAGTGTCGCCTACGACGCGGAGCCGAACAGAAACGTGGTCGCCACCGCAGACAGGGAAAAGTCGTGGCTGCCGGCGATGAGCGTTCTGGAGGTGCTGGCGAGGGAGGCGGGAAAGAGGCGCGTCCCCGGGCCGGTGCTACGCGCCCCGCCCCCCGCTACGCACGTCCCTCCCACTGCTACGCCCGCTACATCGACAAGCAGGACAACCGGTGCCTGGGCGACGCTCACCTCCACAAACGCGTGGGCTTCGCGCAGCCAGCCGCGCCCTGCCCCAGCGGAGCCCAAGATAGACTACTTCGACAACCCGCCGGAAAATTAG
- Protein Sequence
- MSHWNNSYAYNNQFQGPPNAWNTDLNGQYVNPAYYDEQYANTYMQYRDERVERVAKTEKAASPAKAKNKTVVDPPVGNTAMTQRERLTEQLDKGTLECLVCCERVKQTDSVWWCSNCYHVLHLRCIRKWATSSLVEGKWRCPACQNTNEEVPTEYRCMCGAVRSPEYSRGTVSAHTCGKSCRRPRSCPHPCTLLCHPGPCPPCQATISKQCGCGAETRSVLCSSKLPQLCGRECKRTLACGVHKCQRECHEGLCDECSETVTQVCHCPAAKSRSVPCTAETGACATWSCGAACARVLACGAHVCRRVCHPPECAPCPLRPENVHTCPCGNTRIEKGQRKSCTDPIPLCGNICAKPLPCGPDGDKHFCKQLCHEGPCPTCPDKTLLPCRCGHSSREVPCAELPEMANNVLCQKKCNKKLSCGRHRCRTVCCAAQSHRCAVVCGRTLSCQLHRCEEFCHTGHCAPCPRVSFEELRCECGAEVALPPVRCGARAPACSAPCRRERPCRHPPHHSCHTGDCPPCVVLTTKMCHGRHEERKTIPCSQEEFSCGLPCGKPLPCGKHTCVKTCHKGPCDTEKCRQPCAEKRAGCGHACAAPCHVAGGGACPSSSPCRRAVRATCPCSRRTAERTCHENARDYAKLMSTLAATKMQEGGSVDISEVQRPGAMLKTLECDDECRMEARCRQLALALQIRNPDVSAKLAPRYSEHVRATAAREPAFAQQVHDCLTELVQRAKKSKQKTRAHSFPSMNRQKRQFIHELCEHFGCESVAYDAEPNRNVVATADREKSWLPAMSVLEVLAREAGKRRVPGPVLRAPPPATHVPPTATPATSTSRTTGAWATLTSTNAWASRSQPRPAPAEPKIDYFDNPPEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00181015; iTF_01116132;
- 90% Identity
- -
- 80% Identity
- -