Oale004676.1
Basic Information
- Insect
- Ornithoptera alexandrae
- Gene Symbol
- PAXBP1
- Assembly
- GCA_029030555.1
- Location
- JARDVY010000023.1:2207538-2220555[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.6e-17 4.9e-13 49.9 0.0 7 190 515 677 509 689 0.83
Sequence Information
- Coding Sequence
- ATGTCATTGTTTCGTAAACCAAAGAAGATTCAAAGACGCGTTTTTtgtgctgatgatgaagatgacgGCGACCCAGAACCACCACCTCCTCCAATCATCAGTCAGAAGAAAGAAAACAAACCTATTAAGAATACTCCTCTGTTGAGTTTTGCTGATGAAGagGATGATGGTGAAgtatttaaagtaaagaaGTCATCACAAAGCAAGCGACTCGCCAAGAGGCTGGAGAAGGAAAGGCGCCGGGTCCCTGAGGgtgataataacaaatttgagAATGACACAACAGAGgaaCCAGTGCAGCTAGAAGATAATGACGAGAAGCCGAAGTCCAAGAAGAAAATCACGCTCGAAGGTCTAATTCTAGCCGGCCGCGAGGCATTGGCCGCCGACGGCACCGGTGACGTGTCCGATGATGaagtagaagaagaagacgaGGATAGTAGGGGGTTTCATCGATACCGCGCGGAGTCAGTGCGCGCGGCACTAGCGCAGCCGGGTCACATTCCCGATGCGGCACTCATCCACGCGGCCCGCAAGACCCGACAGCAGGCACGCGAGCTTGGTCCATATATCCCGATACAGTCGGAGCCAATGCCGGGCTCGCGACTCATCCGTGACGATGGATCCGGCGATGATGACGACGAGGATGGCAGAATAGAAGTCCGCGGATTGGTGTTGCCTAACGATAAACCTAAACgtggtactaccgcagctgcTTCTGAGGAGGAGATGGACAGCGAAGCGGAAGAATGGGAAGAGCAACAAATGCAAAAGGCTATGCCCGCCATTGTAGATATTACaggTGATGGAAATGTAGAACTGAATCCGTTCGCAGTGGCCCCGCCGCAGCCCCGCCTTGAGGAGACACCTTCTCACTTACGCTCCCTGATAGCGCCTGGTAGGCCTCCGCCCGCCACAGCGCAGGAGCTTCTCGAAGCGCTTAGAACacgTTTGGGGGAGCTTCAAACGGACCGCGCAGCGACGGCGACCAAGCGCGACGAGTGCCGCGACCGGCTGTTGAGCGCGGCACGCATGCGCGAGTCGCGCGCAGCTCGTCGCGGCCGGCTCGACAGCGCGTACCGGCGTGCGCAAGCGGCGCGCGGGTACCTCACCGACCTCGTCGAATGTCTCGACGAGAAGATGCCGCAGCTGGAAGCGCTGGAGGCACGCGCGCTGACGATGCACCGGCGTCGCTGTGAGTTCTTAATGGAGCGGCGGCGGGCTGATGTACGCGACCAGGCGCAGGACGTCCTAGCTTTAGCAGCTCGGCCCGGCACAGCGAAAGCAGTAGACACTGAGGAGAAAACGCGTCGTGCGGCGGAAAGGGAGGGTCGGAGGCGCGCGCGCCGCTTGCGACGTGAAGCTGTAGCGGCAGCTACTGGAGCGCAGTGTGTGCACCGCGACGGAGACTCCAGCGACGACGATCTGCCACCTGCCGAGAGGCAACACTTCACTCTCGAGGCCGACGCGATACGGCAGCTGTCTGGGCGTCTGTTCGCGGACGCGCTGCCCGCGTGGCGCGGCGTGCGCGGAGTGTGCGCCCGCACAGCTCGGTGGCGGCGTCGCGACCCCGCACTCTACAGCGATGCGTACGTCGCGGACTGCCTACCGCGCCTGCTCGCTCCATACGTTCGTCACGAGCTGATACTTTGGAATCCACTAGCAGACGAAGATAATGAGGATTATGAGAAAATGGACTGGTACAAATGCCTCATGATGTACGGAGTTCGTCCGGAGAAGCTGTCGAGTGATTCTGAGGAATCTTCCGATGAGGATGCTCAGGTGTCAATCACTGTGGACGAGGAGACGGTGAGAGAAGACCCGGACCTGTTTCTCGTGCCCACGATTGTGAACAAGGTTGTGTTGCCCAAGATAACAGAGCTGGTGGAGCATGCGTGGGACCCTGTATGCGTGCGCGCATGCGTACGACTGCGGCGCGTGCTGGAGCGCGCGTGTGAGCTGCCCGGCGGCGACGCGCTACGCCGGCTAGCAGCTGCTGCGCGCGCACGTCTCGTCGCAGCGCTGCACGCCGACGTGTTCCTCCCGGCACTGCCACCGCCGATTTTGGAGGGGGCCGGCGGTGGGTTCTGGCGACGCTGCCTCGGCTCGGGGGTGCGGCTGCTACGCGCGGCGCTTGCGCTCTCTGCTCCGCCGCCCGCCCTCAACGCTGACAGTGTGGTCCTCTCGCTTATAGAAACACTGTGCTGTGCGGCGGGCGCAGCGCCCGGGCCGCAGGTGGCTGCCGCAGGCGCTGCGCTTGCGCACACGCTGCCGCGCACCGGCGCACTACGCGCCAAAGCACTGCAACGGCTTGCGCGGCTGGCGCAGCTTGCGCTCTCCCGCTTACAGACCGACAACCCTCTACATTTgAAAGCTCTGGAGCAGGCGCGTGGGATCATCGCGGAAGCGCGAGCCCTCGAATGA
- Protein Sequence
- MSLFRKPKKIQRRVFCADDEDDGDPEPPPPPIISQKKENKPIKNTPLLSFADEEDDGEVFKVKKSSQSKRLAKRLEKERRRVPEGDNNKFENDTTEEPVQLEDNDEKPKSKKKITLEGLILAGREALAADGTGDVSDDEVEEEDEDSRGFHRYRAESVRAALAQPGHIPDAALIHAARKTRQQARELGPYIPIQSEPMPGSRLIRDDGSGDDDDEDGRIEVRGLVLPNDKPKRGTTAAASEEEMDSEAEEWEEQQMQKAMPAIVDITGDGNVELNPFAVAPPQPRLEETPSHLRSLIAPGRPPPATAQELLEALRTRLGELQTDRAATATKRDECRDRLLSAARMRESRAARRGRLDSAYRRAQAARGYLTDLVECLDEKMPQLEALEARALTMHRRRCEFLMERRRADVRDQAQDVLALAARPGTAKAVDTEEKTRRAAEREGRRRARRLRREAVAAATGAQCVHRDGDSSDDDLPPAERQHFTLEADAIRQLSGRLFADALPAWRGVRGVCARTARWRRRDPALYSDAYVADCLPRLLAPYVRHELILWNPLADEDNEDYEKMDWYKCLMMYGVRPEKLSSDSEESSDEDAQVSITVDEETVREDPDLFLVPTIVNKVVLPKITELVEHAWDPVCVRACVRLRRVLERACELPGGDALRRLAAAARARLVAALHADVFLPALPPPILEGAGGGFWRRCLGSGVRLLRAALALSAPPPALNADSVVLSLIETLCCAAGAAPGPQVAAAGAALAHTLPRTGALRAKALQRLARLAQLALSRLQTDNPLHLKALEQARGIIAEARALE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00922890;
- 90% Identity
- iTF_00249717;
- 80% Identity
- -