Ofri016070.1
Basic Information
- Insect
- Ornithomya fringillina
- Gene Symbol
- lov
- Assembly
- GCA_963978525.1
- Location
- OZ021694.1:22372753-22385752[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.8e-18 5.9e-15 54.8 0.0 1 44 842 885 842 886 0.96
Sequence Information
- Coding Sequence
- ATGTTAAAAGATTCAGAGGAAATCATTAAAAGACGCAAAGTGTCGTTAATGTCAGCAGGTAGCAGTGCGAGAGCTACTAACGCCACTACTACCACTGCCATAGAATTGGAGGCTGCTGCGGTTTTTATGGCACCTGGTACACCGCCTGCCCTACCATACATGGCTTTAGATCAAATACCGCCAACAGACGTGACTCCAACGACGACCAACACCACATTGGCAGCATCGAATGGTGtttcaccaacaacaacacacgcCAACAACGAATCAAATGTTTATTCCCTGCCCACCACCAATGCCGAACGCCTAAGCCCGTTCACAACGATGGCTGCGGCTTTAATGTCCAACAATGTTACCACCACACCCCTCAGTGCAATACCAGATCACTACAGTCTGAGATGGAACAATCATCAGAGTCACATATTGAATGCTTTTGATGCTCTACTGCAGACAAAAGCTTTAGTTGATGTAACGTTGGTATGTGCGGAGACGAGTATACGAGCCCATAAAATGGTTTTATCCGCTTGTTCACCATTCTTTCAACGAGTTTTCACCGACACTCCGTGCAAACATCCCGTTATCGTGCTTAAAGATTTCAGAGGTTGGGTAGTACAGGCCATTATCGACTTTATGTACCACGGAGAAATAAGTGTACCGCAGGAGAGGTTACAAACTTTAATACAAGCCGGCGAATCTTTACAAATACGAGGCCTTGTAGAGAGTTCTATACCAGAACGTATGCGCACACCTGCCGCCACATCACCCGTTGACTTTGACACAGCGGCACTTTCATCAGAATTGGAGAGATGTTCTAGCTTGGATGAAGAGTCGCCTTCTATGGTGACAGCGGcctcaaaaattattttgcctTCTCGATTGTACGGATCCTCACTACGATTCGGTCGAGAGCGTTGCCAAACTATTGCAGCAGATTGTCATGAACCAGAAGTGATGCCCGAACCTGTCAGTCATAACGATCTCTGTACATCGCCCATGCCAAGACGGAAACAAGCGCGACCTCGGCGCCGTTCCGGAGACCTGCCTCATGACTTGTGCAACAGTAAATCAAACTCACCCGCCCTTAAGGAAAAGACAAGTTTCGAACAGGAAGAACCTgatatattacaacaacaacaacaacaacaacaaataaagcCTCCACAAGAACAAATCGACCACATGGAGTGTCTAAATACTGTGATTAAAACTGAACAAATTGAACCAATGGAAGAGGACGAAGCAGAACAGGAGAATAATGAGCAGGACAAAGATTTGCAAAACCAAAATGAAGACATTAGTAATGATGACCATGAAGCCCATGAAACATCCCCGGAAACCCGTAAAATATCTAGTGATTCAACCACAAATGATCATGAATATGAACCATCTACACATATGGAGAATGATATGGAATTTTCACTGCCCGAGGAAGAGGACAAGGAGGTGGATGACGAAGATGAGGCTGAGGAAGAATCGGAAGATTTGgaagatttaattttaaactcCAACGAACTGAGTAGACGACACAAGTCGATTATGTCGATTAATTCGGACGGTCCGGAAGATTTGTGTACAACAAAGAAAAGCAAAGACACCAGTGCAACAGATCATTCGACAGTGTCTGATAATGAAGAGAATTCTTTGAACaatagtaacaataataataatagtagcaaattaaataacaataatagtggGGGCAGTAGCAATAACAACCGAATGGTTCTCTCGCTAAAGGATATGCGACAATTGAATAAACCCACACCAGCCTCGACACCCAACTCCAGCAGCAATAGTATGCATCCTTTTTCAACAGCTCACATAAGAGACTTGAGATTGGATCGCGCATCCATGGAAAGCCAATGCAAGATTGAAGCGTTGGAGGCACAAATGCAGGCGGTGGCGGCGGCAGCAGCAGCCAGCGGCGAGAATCCTTTTCAACACATGGAACATCAAATGGATTTATCGTTAGCGGCCGCAGCAGCAGCGGCTGCTGTTTCGCATCATCAATCGCGTGAACGAGACCATCACGCTTTACAGCGTGAACATCGagaactgcaacaacagcacaaCGCTTACGCTAACAGTATTCTTGGGCAAATGGGTATGCCCGGCATACCACCATTCGGTCATTCTTCCGGTCCCCCACCCAATACGGGGGCACCTCACGAACGCCTGGAGGAGAGTATGAGTCGCTTAAGTAAAGAATTAACGCCCAGCTCACCCATGAGTCTACCCTCACATTTTAACCCGCCCGATGGACATGGCACGCATCCCCCGTCACCATTGCCCTTTCCCGGCATGTCAACAGCTTTAAATTTAACGCCGCCACACATGTTTGGGTTGGATTCCCCTTTAGGACTATTCCCACCTGGCATCGATCCGGGCAAACTGTACAACCCCTTAATGGATATGCCAGATCCACGAGGTATGCCTGGTGATCAGCCGCCCtttctaaaaaagaaaaTGCCTCGACCGAAAGGTCAACATTCGGCGCCTCGAGGTGGCCCACCCCGTTCATGGACCAATGCCGAATTAACCGAAGCTTTGCAACATGTgtggaataaaaaaatgaccactTCGCAGGCCTCCCGCATATTCGGCATTCCCTACAACTCGCTGCTAATGTATGTACGCGGTAAATATggcaaaagtttaaaattagaGCAACTGCGCAAAGATTGTATTAGCGGGCCGCCGCTGGAACTCTTACAAATGGGTGTTAGTGGTGGTAAAAATTCCGCAGAATGTCGAGAACAGAGAGAAGCGCGTAAGGAAGCGCAAAGAAATGCCGCTGTAGCGGCGGCCGCAGCGGCTACCGCAGCCGAAATGGATCTAGCGAATGCTCCTCTAACGGGAGGTCCATCAGGCCCGCGCAGCGGTAGCTCCGAATCGGATTTATTAGGTGGCCATAATGCTCTCTTCAATCCCTTCAATCCGCAAAGTTTTTATCCCGACTTTCCGGGTAGTTTTCCTGGTCTACCGTTAAGTATGCTAAATCTACTGCCACCCGCCGACAGATCACAACATCCAGCCAGTTCGCTTATGCATCATGGGGGCGGTGGTATGGGCTTAGAGGAGGATTGCAAATCTGATCGTTCCAAGCAATCGTCTTCAATGGATGACGAATTTTCCGCCAATAATCAGGCTTTAGCGATAAGCGGTGGCAACGGGGGCGGAGGTGGAGGGGGACGAAGTGATGAACGTCGTCATAACGATTTGATGCTGAATAATACTTTGAATAATGTTGCTAACCCAGCTGGTTCCGCCACTCAGACGAATTCTGGTGGCGGCGGCAATATGCAGGATTGA
- Protein Sequence
- MLKDSEEIIKRRKVSLMSAGSSARATNATTTTAIELEAAAVFMAPGTPPALPYMALDQIPPTDVTPTTTNTTLAASNGVSPTTTHANNESNVYSLPTTNAERLSPFTTMAAALMSNNVTTTPLSAIPDHYSLRWNNHQSHILNAFDALLQTKALVDVTLVCAETSIRAHKMVLSACSPFFQRVFTDTPCKHPVIVLKDFRGWVVQAIIDFMYHGEISVPQERLQTLIQAGESLQIRGLVESSIPERMRTPAATSPVDFDTAALSSELERCSSLDEESPSMVTAASKIILPSRLYGSSLRFGRERCQTIAADCHEPEVMPEPVSHNDLCTSPMPRRKQARPRRRSGDLPHDLCNSKSNSPALKEKTSFEQEEPDILQQQQQQQQIKPPQEQIDHMECLNTVIKTEQIEPMEEDEAEQENNEQDKDLQNQNEDISNDDHEAHETSPETRKISSDSTTNDHEYEPSTHMENDMEFSLPEEEDKEVDDEDEAEEESEDLEDLILNSNELSRRHKSIMSINSDGPEDLCTTKKSKDTSATDHSTVSDNEENSLNNSNNNNNSSKLNNNNSGGSSNNNRMVLSLKDMRQLNKPTPASTPNSSSNSMHPFSTAHIRDLRLDRASMESQCKIEALEAQMQAVAAAAAASGENPFQHMEHQMDLSLAAAAAAAAVSHHQSRERDHHALQREHRELQQQHNAYANSILGQMGMPGIPPFGHSSGPPPNTGAPHERLEESMSRLSKELTPSSPMSLPSHFNPPDGHGTHPPSPLPFPGMSTALNLTPPHMFGLDSPLGLFPPGIDPGKLYNPLMDMPDPRGMPGDQPPFLKKKMPRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCISGPPLELLQMGVSGGKNSAECREQREARKEAQRNAAVAAAAAATAAEMDLANAPLTGGPSGPRSGSSESDLLGGHNALFNPFNPQSFYPDFPGSFPGLPLSMLNLLPPADRSQHPASSLMHHGGGGMGLEEDCKSDRSKQSSSMDDEFSANNQALAISGGNGGGGGGGRSDERRHNDLMLNNTLNNVANPAGSATQTNSGGGGNMQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01115112; iTF_01114134; iTF_01114355; iTF_00384669; iTF_00384500;
- 90% Identity
- iTF_00384669;
- 80% Identity
- iTF_01115112;