Cpal012065.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Crataerina pallida
Gene Symbol
lov
Assembly
GCA_949710015.1
Location
OX453293.1:2777014-2789516[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.8e-18 5.4e-15 54.8 0.0 1 44 838 881 838 882 0.96

Sequence Information

Coding Sequence
ATGTTAAAAGATTCAGAGGAAATCATTAAAAGACGCAAAGAGTCGTTAATGTCAGCAGGTAGCAGTGCGAGAGCTACCACTGCCATAGAATTGGAGGCTGCTGCGGTTTTTATGGCACCTGGTACACCGCCTGCCCTACCATACATGGCTTTAGATCAAATACCGCCAACAGACGTGAATCCAACGACGACCAGCACCACATTGGCAGCGTCGAATGGTGTttcaccaacaacaacacacgCCAACAACGAATCAAATGTTTATCCCCTGCCCACCACCAATGCCGAACGCCTAAGCCCGTTCACAACGATGGCTGCGGCTTTAATGTCCAACAATGTTACCACCACACCCCTCAGTGCAATACCAGATCACTACAGTCTGAGATGGAACAATCATCAGAGTCACATATTGAATGCTTTTGATGCTCTACTGCAGACAAAAGCTTTAGTTGATGTAACGTTGGTATGTGCGGAGACGAGTATACGAGCCCATAAAATGGTTTTATCCGCTTGTTCACCATTCTTTCAACGAGTTTTCACCGATACTCCGTGCAAACATCCCGTCATCGTGCTCAAAGATTTCAGAGGTTGGGTAGTACAGGCCATTATCGACTTTATGTACCACGGGGAAATAAGTGTACCGCAGGAGAGGTTACAAACTTTAATACAAGCCGGCGAATCTTTACAAATACGCGGCCTTGTAGAGAGTTCTATACCGGAACGTATGCGCACACCTGCCGCCACATCACCCGTTGACTTTGAGACAGCAGCACTTTCCTCAGAATTGGAGAGATGTTCTAGCTTGGATGAAGAGTCGCCTTCTATGGTGACAGCGGcctcaaaaattatattgccTTCTCGATTGTACGGATCCTCACTACGATTCGGTCGAGAACGTTGCCAAACTATTGCAGCAGATTGTCATGAACCAGAAGTGATGCCCGAACCTGTCAGTCATAACGATCTCTGTACATCGCCCATGCCAAGACGGAAACAAGCGCGACCTCGGCGCCGTTCCGGAGACCTGCCTCATGACTTGTGCAACAGTAAATCAAACTCACCCGCCCTTAAGGAAAAGATAAGTTTCGAACAGGAAGAACCTGAagtattacaacaacaacaacaacagcaacaacaaatgacGCCTCCACAAGAACAAATAGACCACATGGAGTGTCTAAATACTGTGATTAAAACTGAACAAATAGAACCAATGGAAGAGGACGAAGCAGAACAGGAGAATAATGAGCAGGACAAAGATTTGCAAAACCAAAATGAAGACATTAGTAATAATGACCATGAAGCCCATGAAACATCCCCGGAAACCCGTAAAATATCTAGTGATTCAACCACAAATGATCATGAATATGAACCATCTACACATATGGAGAATGATATGGAATTTTCACTGCCCGAGGAAGAGGACAAGGAGGTGGATGACGAAGATGAGGCTGAGGAAGAATCAGAAGATTTGGaagatttaattttaaactcCAACGAACTGAGTAGACGACACAAGTCGATTATGTCGATTAATTCGGACGGTCCGGAAGATTTGTGTACAACAAAGAAAAGCAAAGACACCAGTGCAACAGATCATTCGACAGTGTCTGATAATGAAGACAATTCTTTgaacaatagtaataataataataatagtagcaaactaaataacaataatagtgGGGGCAGTAGCAATAACAATCGAATGGTTCTCTCGCTAAAGGATATGCGACAATTGAATAAACCCACACCAGCCTCGACACCCAACTCCAGCAGCAATAGTATGCATCCTTTTTCAACAGCTCACATAAGAGACTTGAGATTGGATCGCGTCTCCATGGAAAGCCAATGCAAGATTGAAGCGTTGGAGGCACAAATGCAGGCGGTGGCGGCGGCAGCAGCAGCCAGCGGCGAGAATCCTTTTCAACACATGGAACATCAAATGGATTTATCGTTAGCGGCCGCAGCAGCAGCGGCTGCTGTTTCGCATCATCAATCGCGTGAACGAGACCATCACGCTTTACAGCGTGAACATCGAGAACTGCAACAACAGCACAACGCTTACGCTAACAGTATTCTGGGGCAAATGGGTATGCCCGGCATACCACCATTCGGTCATTCTTCCGGTCCCCCACCCAATGCGGGGGCACCTCACGAACGTCTGGAGGAGAGTATGAGTCGCTTAAGTAAAGAATTAACGCCCAGCTCACCCATGAGTCTACCCTCACATTTTAACCCCCCCGATGGACATGGCACGCATCCCCCGTCACCGTTGCCCTTTCCTGGCATGTCAACAGCTTTAAATTTAACGCCGCCACACATGTTTGGGTTGGATTCCCCTTTAGGACTATTCCCACCTGGCATCGATCCGGGCAAACTGTACAACCCCTTAATGGATATGCCAGATCCACGGGGTATGCCTGGCGATCAGCCGCCCtttctaaaaaagaaaaTGCCTCGACCGAAAGGTCAACATTCGGCGCCTCGAGGTGGCCCACCCCGTTCATGGACCAATGCCGAATTAACCGAAGCTTTGCAACATGTgtggaataaaaaaatgacCACTTCTCAGGCCTCCCGCATATTCGGCATTCCCTACAATTCGCTGCTAATGTATGTACGCGGTAAATATggcaaaagtttaaaattagaGCAACTGCGCAAAGATTGTATTAGCGGGCCGCCGCTGGAACTCTTACAAATGGGTGTTAGTGGTGGTAAAAATTCCGCAGAAAGTCGAGAACAGAGAGAAGCGCGTAAGGAAGCGCAAAGAAATGCCGCCGTAGCGGCGGCCGCAGCAGCTACCGCAGCCGAAATGGATCTAGCGAATGCTCCTCTAACGGGAGGTCCATCAGGCCCGCGTAGCGGTAGCTCCGAATCGGATTTATTAGGTGGCCATAATGCTCTCTTCAATCCTTTCAATCCGCAAAGTTTTTATCCCGATTTTCCGGGTAGTTTTCCTGGTCTACCGTTAAGTATGCTAAATCTTCTGCCACCCGCCGACAGATCACAACATCCAGCCAGTTCGCTTATGCATCATGGGGGCGGTGGTATGGGCTTAGAGGAGGATTGCAAATCTGATCGTTCCAAGCAATCGTCTTCAATGGATGACGAATTTTCCGCCAATAATCAGGCTTTAGCAATAAGCGGTGGCAACGGGGGCGGAGGTGGAGGAGGACGAAGCGATGAACGTCGTCATAATGATTTGATGCTAAATAATACTTTAAATAATGTTGGTAATCCAGCTGGTTCCGCCACTCAGACGAATTCTGGTGGCGGCGGCAATATGCAGGATTGA
Protein Sequence
MLKDSEEIIKRRKESLMSAGSSARATTAIELEAAAVFMAPGTPPALPYMALDQIPPTDVNPTTTSTTLAASNGVSPTTTHANNESNVYPLPTTNAERLSPFTTMAAALMSNNVTTTPLSAIPDHYSLRWNNHQSHILNAFDALLQTKALVDVTLVCAETSIRAHKMVLSACSPFFQRVFTDTPCKHPVIVLKDFRGWVVQAIIDFMYHGEISVPQERLQTLIQAGESLQIRGLVESSIPERMRTPAATSPVDFETAALSSELERCSSLDEESPSMVTAASKIILPSRLYGSSLRFGRERCQTIAADCHEPEVMPEPVSHNDLCTSPMPRRKQARPRRRSGDLPHDLCNSKSNSPALKEKISFEQEEPEVLQQQQQQQQQMTPPQEQIDHMECLNTVIKTEQIEPMEEDEAEQENNEQDKDLQNQNEDISNNDHEAHETSPETRKISSDSTTNDHEYEPSTHMENDMEFSLPEEEDKEVDDEDEAEEESEDLEDLILNSNELSRRHKSIMSINSDGPEDLCTTKKSKDTSATDHSTVSDNEDNSLNNSNNNNNSSKLNNNNSGGSSNNNRMVLSLKDMRQLNKPTPASTPNSSSNSMHPFSTAHIRDLRLDRVSMESQCKIEALEAQMQAVAAAAAASGENPFQHMEHQMDLSLAAAAAAAAVSHHQSRERDHHALQREHRELQQQHNAYANSILGQMGMPGIPPFGHSSGPPPNAGAPHERLEESMSRLSKELTPSSPMSLPSHFNPPDGHGTHPPSPLPFPGMSTALNLTPPHMFGLDSPLGLFPPGIDPGKLYNPLMDMPDPRGMPGDQPPFLKKKMPRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCISGPPLELLQMGVSGGKNSAESREQREARKEAQRNAAVAAAAAATAAEMDLANAPLTGGPSGPRSGSSESDLLGGHNALFNPFNPQSFYPDFPGSFPGLPLSMLNLLPPADRSQHPASSLMHHGGGGMGLEEDCKSDRSKQSSSMDDEFSANNQALAISGGNGGGGGGGRSDERRHNDLMLNNTLNNVGNPAGSATQTNSGGGGNMQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01114937;
90% Identity
iTF_00384669;
80% Identity
iTF_00384669;