Basic Information

Insect: Ornithomya chloropus
Gene Symbol: lov_1
Assembly: GCA_963971445.1
Location: OZ020530.1:11168323-11181452[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2.8e-18 7.3e-15 54.8 0.0 1 44 854 897 854 898 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2.8e-18	7.3e-15	54.8	0.0	1	44	854	897	854	898	0.96

Sequence Information

Coding Sequence: ATGTTAAAAGATTCAGAGGAAATCATTAAAAGACGCAAAGTGTCGTTAATGTCAGCAGACAGCAGTGCGAGAGctaccactactactactactgctgCCATAGAATTGGAGGCTGCTGCGGTTTTCATGGCACCTGGTACACCGCCTGGCCTACCATACATGGCTTTAGATCAAATACCGCCAACAGACGTGACTCCAACGACGGCCAGCACCACATTAGCAGCGTCGAATGGTGtatcaccaacaacaacacacgCCAACAACGAATCAAATGTTTATTCCCTGCACACCACCAACGCCGAACGCCTGAGCCCGTTCACAACGATGGCTGCGGCTTTAATGTCCAACAATGTTACCACCACACCCCTCAGTGCAATACCAGATCACTACAGTCTGAGATGGAACAATCATCAGAGTCACATATTGAATGCTTTTGATGCCCTACTGCAGACAAAAGCTTTAGTTGATGTAACGTTGGTATGTGCGGAGACGAGTATACGAGCCCATAAAATGGTTTTGTCCGCTTGTTCACCATTTTTTCAACGAGTTTTCACCGACACTCCGTGCAAACATCCCGTCATCGTGCTTAAAGATTTCAGAGGTTGGGTAGTACAGGCCATTATCGACTTTATGTATCACGGGGAAATAAGTGTACCGCAGGAGAGGTTACAAACTTTAATACAAGCGGGCGAATCTTTACAAATACGAGGCCTTGTAGAGAGTTCTATACCAGAACGTATGCGCACACCTGCTGCCACATCACCCGTTGACTTTGACGCAGCAGCTCTTTCATCAGAATTGGAGAGATGTTCCAGTTTGGATGAGGAGTCGCCTTCTATGGTGACAGCTGcctcaaaaattattttgccTTCTCGATTGTACGGATCCTCGCTACGATTCGGTCGAGAGCGTTGCCAAAATATTGCAGCAGATTGTCATGAACCGGAAGTGATGCCCGAACCTGTGAGTCATAACGATCTCTGTACATCGCCCATGCCCAGACGAAAACAAGCACGACCACGTCGCCGTTCCGGAGACCTGCCTCATGACTTGTGCAACAGTAAATCAAACTCACCCGCCCCTAAGGAAAAGTCAACTTTCGAACCTGAAGAACCTGAagtattacaacaacaacaacagcagcagcaacagcagcaacagcaacaaaaacaacaacaacaaatgaagtCTCCACAAGAACAAACCGACCACATGGACTGTCTAAATGCTGTGATTAAAACTGAACAAATAGAACCAATGGAAGAGGACGAAGCAGAACAAGAGAATAATGAGCAGAACAAAGATTTGCAAAACCAAAATGAAGACAATAGTAATAATGACCATGAAGCCCCTGAAAATTCCCCAGAAACCCGTAAAATATCTAGTGATTCAACCACAAATGATCATGAATATGAACCATCTACACATATGGAGAATGACATGGAATTTCCACTTCCCGAGGAAGAGGACAAGGAGATGGATGACGAAGATGAGGCTGAGGAAGAATCGGAAGATTTGgaagatttaattttaaactcCAATGAACTGAGTAGACGACACAAGTCGATTATGTCGATTAATTCGGACGGTCCCGAAGATTTATGtacaacaaagaaaaacaaagacACCAGTGCAACAGATCATTCAACAGTTTCTGACAATGAGGACAATTCTTTGaacaacagtaataataataacaataattgtagcaaactaaataacaataatagtgGGGGCAGTAGCAATAACAACCGAATGGTTCTCTCGCTAAAAGATATGCGACAATTGAATAAACCCACACCAGCCTCGACACCCAACTCCAGCAGCAACAGTATGCATCCTTTTTCAACAGCTCACATAAGAGACTTGCGATTGGATCGCGTCTCCATGGAAAGCCAGTGCAAGATTGAAGCGTTGGAGGCACAAATGCAGGCTGTGGCGGCGGCAGCAGTAGCCAGCGGCGAGAATCCTTTTCAACACATGGAACATCAAATGGATTTATCGTTAGCGGCCGCAGCAGCAGCGGCTGCTGTTTCGCATCATCAATCGCGTGAACGAGACCACCAAGCTTTACAGCGCGAACATCGAGAACTGCAACAGCAGCACAACGCTTACGCTAACAGTATTCTGGGGCAAATGGGTATGCCCGGCATACCACCATTCGGTCATTCTTCCGGTCCCCCACCCAATGCGGGGGCACCCCACGAACGCCTGGAGGAGAGCATGAGCCGCTTAAGTAAAGAATTAACGCCCAGCTCACCCATGAGTCTACCGTCACATTTTAACCCGTCCGATGGACACGGCACGCACCCCCCGTCACCGTTGCCCTTTCCTGGCATGTCAACAGCTTTAAATTTAACGCCGCCACACATGTTTGGCTTGGATTCCCCTTTAGGACTATTCCCACCTGGCATCGATCCGGGCAAACTGTACAACCCCTTAATGGATATGCCGGATCCACGGGGTATGCCTGGCGATCAGCCGCCCTttctaaaaaagaaaaTGCCTCGACCGAAAGGTCAACATTCGGCGCCCCGAGGTGGCCCACCCCGTTCATGGACCAATGCCGAATTAACCGAAGCTTTGCAACATGTgtggaataaaaaaatgaccACTTCGCAGGCCTCCCGCATATTTGGCATTCCCTACAACTCGCTGCTAATGTATGTACGCGGCAAATATGGCAAAAGTTTAAAACTAGAGCAACTGCGCAAAGATTGTATAAGCGGGCCGCCGCTGGAACTCCTACAAATGGGTGTTAGCGGTGGTAAAAATTCCGCAGAAAGTCGAGAACAGAGAGAAGCGCGTAAGGAGGCGCAAAGAAATGCCGCTGTAGTGGCGGCCGCAGCAGCTACTGCAGCCGAAATGGATTTAGCGAATGCTCCTCTAACAGGAGGTCCATCAGGCCCGCGTAGCGGTAGCTCCGAATCGGATTTATTAGGTGGCCATAATGCTCTCTTCAATCCCTTCAATCCGCAAAGTTTTTATCCCGACTTTCCGGGTAGTTTTCCTGGTCTACCGTTAAGTATGCTAAATCTACTGCCACCTGCCGACAGATCACAACATCCGGCCAGTTCACTTATGCATCATGGGGGCGGTGGTATGGGCTTAGAGGAGGATTGCAAATCTGATCGTTCCAAGCAATCGTCCTCAATGGATGATGAATTTTCTGCCAATAATCAGGCTTTAGCGATAAGTGGTGTCGGCAGCGGAGGGGTAGGAGGAGGGCGAAGTGATGAACGTCGCCATAACGATTTAATGCTGAATAATGCTTTGAATAATGTTGCTACCCCAGCTGGTTCCACCACTCAGACGAATTCTGGTGGCGGCGGTAATATGCAGGATTGA
Protein Sequence: MLKDSEEIIKRRKVSLMSADSSARATTTTTTAAIELEAAAVFMAPGTPPGLPYMALDQIPPTDVTPTTASTTLAASNGVSPTTTHANNESNVYSLHTTNAERLSPFTTMAAALMSNNVTTTPLSAIPDHYSLRWNNHQSHILNAFDALLQTKALVDVTLVCAETSIRAHKMVLSACSPFFQRVFTDTPCKHPVIVLKDFRGWVVQAIIDFMYHGEISVPQERLQTLIQAGESLQIRGLVESSIPERMRTPAATSPVDFDAAALSSELERCSSLDEESPSMVTAASKIILPSRLYGSSLRFGRERCQNIAADCHEPEVMPEPVSHNDLCTSPMPRRKQARPRRRSGDLPHDLCNSKSNSPAPKEKSTFEPEEPEVLQQQQQQQQQQQQQQKQQQQMKSPQEQTDHMDCLNAVIKTEQIEPMEEDEAEQENNEQNKDLQNQNEDNSNNDHEAPENSPETRKISSDSTTNDHEYEPSTHMENDMEFPLPEEEDKEMDDEDEAEEESEDLEDLILNSNELSRRHKSIMSINSDGPEDLCTTKKNKDTSATDHSTVSDNEDNSLNNSNNNNNNCSKLNNNNSGGSSNNNRMVLSLKDMRQLNKPTPASTPNSSSNSMHPFSTAHIRDLRLDRVSMESQCKIEALEAQMQAVAAAAVASGENPFQHMEHQMDLSLAAAAAAAAVSHHQSRERDHQALQREHRELQQQHNAYANSILGQMGMPGIPPFGHSSGPPPNAGAPHERLEESMSRLSKELTPSSPMSLPSHFNPSDGHGTHPPSPLPFPGMSTALNLTPPHMFGLDSPLGLFPPGIDPGKLYNPLMDMPDPRGMPGDQPPFLKKKMPRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCISGPPLELLQMGVSGGKNSAESREQREARKEAQRNAAVVAAAAATAAEMDLANAPLTGGPSGPRSGSSESDLLGGHNALFNPFNPQSFYPDFPGSFPGLPLSMLNLLPPADRSQHPASSLMHHGGGGMGLEEDCKSDRSKQSSSMDDEFSANNQALAISGVGSGGVGGGRSDERRHNDLMLNNALNNVATPAGSTTQTNSGGGGNMQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01114937;
90% Identity: iTF_00384669;
80% Identity: iTF_01114355;