Basic Information

Insect: Ormyrus thymus
Gene Symbol: RREB1
Assembly: GCA_035582935.1
Location: JAWWEM010000001.1:21360803-21366743[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0073 0.98 10.9 0.5 1 23 71 93 71 93 0.96

2 16 0.00043 0.058 14.8 0.0 1 23 108 130 108 130 0.97

3 16 2.6e-07 3.5e-05 24.9 1.3 1 23 136 159 136 159 0.98

4 16 0.24 32 6.2 0.1 1 23 258 282 258 282 0.93

5 16 0.011 1.5 10.4 2.0 2 23 288 310 287 310 0.96

6 16 1 1.4e+02 4.1 0.7 1 19 363 381 363 383 0.92

7 16 0.075 10 7.8 0.1 1 23 496 518 496 518 0.96

8 16 4e-05 0.0054 18.0 0.5 1 23 527 549 527 549 0.98

9 16 0.0014 0.19 13.2 2.8 1 23 555 578 555 578 0.97

10 16 0.0009 0.12 13.8 3.0 1 23 970 993 970 993 0.96

11 16 0.00055 0.074 14.5 0.1 3 23 1267 1287 1265 1287 0.97

12 16 1 1.4e+02 4.2 6.5 1 23 1293 1316 1293 1316 0.97

13 16 0.0094 1.3 10.6 2.3 1 23 1357 1381 1357 1381 0.97

14 16 6.1 8.2e+02 1.7 2.5 1 23 1498 1521 1498 1521 0.86

15 16 0.013 1.7 10.2 0.4 2 23 1577 1598 1576 1598 0.94

16 16 1.5 2e+02 3.7 8.2 1 23 1604 1626 1604 1626 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0073	0.98	10.9	0.5	1	23	71	93	71	93	0.96
2	16	0.00043	0.058	14.8	0.0	1	23	108	130	108	130	0.97
3	16	2.6e-07	3.5e-05	24.9	1.3	1	23	136	159	136	159	0.98
4	16	0.24	32	6.2	0.1	1	23	258	282	258	282	0.93
5	16	0.011	1.5	10.4	2.0	2	23	288	310	287	310	0.96
6	16	1	1.4e+02	4.1	0.7	1	19	363	381	363	383	0.92
7	16	0.075	10	7.8	0.1	1	23	496	518	496	518	0.96
8	16	4e-05	0.0054	18.0	0.5	1	23	527	549	527	549	0.98
9	16	0.0014	0.19	13.2	2.8	1	23	555	578	555	578	0.97
10	16	0.0009	0.12	13.8	3.0	1	23	970	993	970	993	0.96
11	16	0.00055	0.074	14.5	0.1	3	23	1267	1287	1265	1287	0.97
12	16	1	1.4e+02	4.2	6.5	1	23	1293	1316	1293	1316	0.97
13	16	0.0094	1.3	10.6	2.3	1	23	1357	1381	1357	1381	0.97
14	16	6.1	8.2e+02	1.7	2.5	1	23	1498	1521	1498	1521	0.86
15	16	0.013	1.7	10.2	0.4	2	23	1577	1598	1576	1598	0.94
16	16	1.5	2e+02	3.7	8.2	1	23	1604	1626	1604	1626	0.98

Sequence Information

Coding Sequence: ATGAGAAACGCGGGACGGCTGCGGCCGCGAGGCCTTTCGGAAGAAGAGCGCCAAGCCGCGAACATCCGGCCCGGAGCCCCGGGCAGGGATCGGATGCTGCCTGCGGTTCTCATGACCGCCGAGACTGGACCTGATCAGCGCGACGGCTACAGCGAGAGCCAAACGGATGTTGCATCATCACCTCTGgtcGACCAGCCGGAGTCAGGAAGCCACCCGTGCCCGGCTTGCCCGCTGATACTCGCGAGCTCGCGACATCTGACGAAGCACCTGCGAGGTCACAATTCCCCGCGCAGCACCGACTGCAGCGGCGAGGAGGTCGACTACGCCTGCGGCGTCTGCCGCAAAGTACTGAGCTCCGCGAGCTCCCTGGACCGGCACATACTCGTTCACTCGGGCGAGAGGCCCTTCAAGTGCAAATACTGCGACATGGCCTTCACGACGAACGGCAACATGAACCGACACCTGAGGACGGCTCACACGAGAGTCGCCTCCCCCTCGCACAGCTGCACCGACTCCGAGGGCAGCAGCGACTCCGAGAGACCCCTCCAGCGACGACTCATCGAGGAGGAGTACAACAACAACGAGATCGCCAAGAGGAACAGCCCCACCATCCTGGAGAACGAGAAGGCACCGAGGTCGCCCGCCGTCCTCGGCAACAAGCGCAAGCACCCCGACTACGCGGACGACGGGGACAACCATCGGATGCACAAGATCCTCCTCGGCAACTCGAGGACGGAGAGCCGCGGGGCCTACGCCGACTCCCCCCAGACGTATAGCTGCTCGGCCTGCGGCAAGCAGGACTTCGCGACGAGCGCGATGCTGGAGAACCACCTGGAGAGGAACCACCCGGAGCTGCCGATGAAGTGCGAGACCTGCAGCATGGCCTTCAAGAACCACCGGGCGCTGAACCTCCACCGCATCAGGATGCACTACAGCGAGGTCGTCAGCCAGAAGAACGCCCAGGACTCCGTGGTCGGCTTCAACGACCTCACCTGCATCGACTTCACTTCCGACAAGTTCCCAGCGATCGCCCGGGCCGTTTGCGAGCAGTCGCTGCATCGGCCGCCTTCCGGCGAGTCGCTCAAGTACCAATGCTCCAAGTGCCTCCGAGCCTTCCCCTGCCGGTCGGCCCTGGTGTCCCACGAGACGGACTGCGGCCTGGTGCTGCCGGCGGACCACCGAATCCACGACGACCAGTCGCGGAGAGACGACTTCTTCGCCGGCCTCGACCTCCAGAACAAGGCAGCCTTGACGGAGGCCAAGGAGGGCAAGGATCTCGCCGACATTCAAAGCATCATCTCCGTCACGTCCGGACCCATTTTACAGAGCTTCTCGAGGGCGGAGACCAGCACCCCCGACAACTGCAAGATCAAGCAGAGCTTCGGATCCTCCGGCTCCTCCGGCACGCCATCTTCCGAGTACCACGAGGAGGAAGCGCAGGACGCGTTCGCCGCCGAGTTCCGGAGGATGAAGCTCAAGGGCGAGTTCCCCTGCAGACTCTGCACGGCAGTCTTTCCGAATCTGCGCGCCCTCAAGGGCCACAACCGAGCCCACATGGGCGTCGGCCCGGGAATGCCCTACCCCTGCAACATGTGCTCGTACAGCAGCACCGACAAGGCCACGCTCATCAGGCACCTGCGGTCGCACAACGGCGACAGGCCCTACGAGTGCTCCCTCTGCAACTACGCCTTCACGACCAAAGCCAACTGCGAGAGGCACGTGAGGAATCGACACGGCAAGCTGTCCAGAGAGGAGATCAAGAGCGTCCTCATCTACCACCCGAGCGAGGACTCCACCAACGACGGCAGCCTGGAAAGAACTTCGCCCCGCGGACTCGTGAGGGACGACGTTCGCAAGACTCTGATCTATCCCAACGAGCGCGACAATCTGACTCCCCAACCGCCGCAGCACTACCCTGGTGAAATCAGAATCAAGGACGAAGCCAAGCTCCGGCAGCCGGGACTGCCCGGACTGCACCCCATCAACTTGAATCACTTCGACAAGAGCGAGCTCTTCTCCAGGCCTCCGACGATGCAGCCGCTGGAGCTCACGCAGTACAGAAACGAACTGGAGAAGGCCCAGCAGATGAAGCACCTGGACGACGACCTCGACTCCGGCTGCTCCGACGAGACCGGATCCCTAGTCCACGAAACCAAAGCAGACTCTCACCAAAGACTCCAGGCCAGCCCGATTGACTTGAAGAAGAGCAGCGGCAACGAGTCCTCGCCCGCCGCCGAGGGAGGAAACGGGGAGGACGCCCCGCTCGACCTCACGATGGACGTCCTCGACTTGAGCAAGAAGGccaacgccgccgccgccgccgccgctgccgcggctGCGGCCGCCATGAAGGAGAAGGACAGCGGCGACGTCAACGGAAACGCCGAGAACCTCGGCGGCGATCAGAAGAACAGCTTCTACAACACCAGCCAGCTGCTCCTCACGCAGGCACTGCTCAAGAGCGTCGGTCAGACCGGCGTTCAGTCGTCGTCGCTCGAGGCTCTCTACGCCAACGCTCACATGCTTTACCGCAACTTCGGCACGTTCCCCCACGTCGGCAGCGGAATCCTGCAGCCCTACCTCTTCAATCCGCACCTCTTCGGCCCGGACAGGATGCAGAAGGAGATGGTCCGCGGCCTGCAGACCAGCGGGGGAAGCCTCGTCGAGCCCCCGATTCCGGGCTACGGCGCGGCCTTCCCCCAGAACCGAAGCACCCTCGCCGCTCACGCGGTCACCGACCAAAGCAACTACGCCAGCCTCATGTCCTCGAAGATGATGAGCAAGAGCAGCATGCCCTCCCGGGAGAAGATGGAGACGTCGCCCTCGTCCAACTCCGTCAAGATGGTCATCAAGAACGGCGTGCTGATGCCGAAGCAGAAGCAGCGCCGCTACAGGACCGAGCGGCCCTTCAGCTGCGAGCACTGCTCCGCCAAGTTCACTCTCAGGAGCAACATGGAGCGGCACATAAAGCAGCAGCATCCTCAGCACTGGAGCCAGAGGCCGAGAGGCGGACACTCGACCAGGGGAAGACCGCCGGCGAATCCGCCGACTCTTCTGCAGAACTTGGGTCAGACCTCGGCTCAGCTGGCTCAGTCGTACTCCAGCTTGATGCCCAAAGTAGGCCAGCCGATGAATCTGGACTACGGGAAGCGGTCCATTTCGGATCAGGTCAAGTATGCCATTTTAGCTCAGCAATTGAAGGGCAACAAGTCGCAAGAGCGCGACTCCGACGAGGAATTGATTATTGACGAAGAATCGACTAATGTCCCAAAGGAAGGATCGGCAAAAGACGCTTCGGAGAGGACGCTGAGTCTTTTGAGAGACAAATTGGAAGCCAATATCGAGTCTAAAGAGAATAATGAATCTAAAGAGTTGAAAAATTCTGAGGAAgtcaagaataaaataaaagaagaaatggACGATGACGAAGCCGGAAATGGCGAGGATGCAGAACAGCAGGAATCCGCTCATGAAAAGTCAGCTAATCAATCGCAAGAAGTGAGCATCAAGAAGGAAGTCGACGAGGACGTTAAAATGGAGTGCGAGACCGAAGATCTGGCCAGCGTTTCCGAAATTTTGGACAACGCTTCGCAGCACTACTTCCAGCCTCAGTACATGAGCGACGAGGAAGGCTTAGTGGCTTCGACCAGCGACTGCAATCAATCCGGCAGCGACGAGAAGTCCGACTCGTTCAATTCCGGCTCCGGCAACTCCTGCTCCtccaaaaagaagaagaagatgaagaagaagaagaagaagaagaagtccGCCTACTCGATGGCACCGAATCGAGTGATCTGCCCCTACTGCCAACGTCCGTTCCCCTGGACCTCGTCGCTCAGGCGGCACATCCTCACGCACACCGGCCAAAAGCCGTACCAGTGCATGCATTGCTCTCTACTCTTCACGACCAAGTCCAACTGCGACCGCCACCTGCTGAGAAAACACAAGGCCAACGCCAACAAGATGCGGAGGACTCGCAGCACCTCGTCGCCCGAGGTCCAGGAGCCGCCCGCGgtcaacaacagcaacaatcAGTTTCAAATGAGGAACGTGCCCGAGAGGCCGTACAAATGCAATCAGTGCCCGAGCTCGACCTTCTCCACCCTCGGCAACCTCAAGAAGCACAAATCGACGAAGCACGGCCTGCACGGCAAGAGCTCCAGGCCCGAGTCACCGGTCAGCGAGAACAGTCCTCAAGACTGCACTCAGGAATCTCCTCAAGAGGCCGCTCAGGAAGTCCAGCCACTCCAGGATAATCCTCCAGAGCGCTCCCAAGACTACTCGCAGGACTGCCCGAAGCAGACCGACCAAAGCGGTTACGAGAGCCAATCCTCGGGCATCTCGGAGCCCATGGACACCCCCATGCCGCCCGTCAATGCGGCGAAAGCTCCCGAGGGCGCCAACAACACACCTCAGTCAGCCAGCGAGGCGTCCCGATCGAGGAAGACCTCGCCGAGATCGTCGCCCGGACCCACCTCCGAGACGCCCTTCAAGTGCCACCTGTGCGACAGCGGATTCGCCGAAAGGCAGGACTGCCTCGAGCACATCAAGGATAACCACGAAGAATCCTACGAAATGCTCGTGGCCAAGGGCGCCCTGGACATGGATCTGGAAGGCAACGAGGAGCAGCCGAACAACCAAGCCCACCAGCAGCCGACGCCAGCTCCACCTCCGAGCGACGGCGAGGAGAAGCGTCGCTTCCCCGACTACAGCAACCGAAAGGTCGTCTGTGCCTTCTGCATGCGCCGCTTCTGGTCGGCGGAGGACCTGCGCCGACACATGCGCACGCACACGGGCGAGCGTCCGTTCTCCTGCGACATCTGCTGCCGGCGGTTCACCCTGAAGCACAGCATGCTGCGCCACCGCAAGAAGCACGAGTCCATCGACTCGAGCATGTACGTGGGCACGAGCGGCGACGAGGACAACGCGCCCGTCGGCCCGATGACCCAGCCGCCGACGATAACCCCCCGCAGCCAGCACCAGGCGCAGGCCACCAGcaacgcgcgcgcctccctGCCGCAGGTGGCGAGCGTCGCCACGGCCGACGCCGCGCCCAACTCGCTCATGCGCTTCAACCCCTACGACAAGCTCGCCACCCTCACCGGCAAGCTCAGCGCCGGCGTCTCCCCGAGCGCCCTGGCAGTCGACGCCAACGACAACACCGACAACGACCTCATCTCGAACCTGCTCGGCATTCGCGACAAGAGCATTATCGACCGCGTCCTGCAGGCGGACTCGGCCGACGACGCCGCCAAGCTGCTCGGCGTCAAGGGTAACCACGAATGA
Protein Sequence: MRNAGRLRPRGLSEEERQAANIRPGAPGRDRMLPAVLMTAETGPDQRDGYSESQTDVASSPLVDQPESGSHPCPACPLILASSRHLTKHLRGHNSPRSTDCSGEEVDYACGVCRKVLSSASSLDRHILVHSGERPFKCKYCDMAFTTNGNMNRHLRTAHTRVASPSHSCTDSEGSSDSERPLQRRLIEEEYNNNEIAKRNSPTILENEKAPRSPAVLGNKRKHPDYADDGDNHRMHKILLGNSRTESRGAYADSPQTYSCSACGKQDFATSAMLENHLERNHPELPMKCETCSMAFKNHRALNLHRIRMHYSEVVSQKNAQDSVVGFNDLTCIDFTSDKFPAIARAVCEQSLHRPPSGESLKYQCSKCLRAFPCRSALVSHETDCGLVLPADHRIHDDQSRRDDFFAGLDLQNKAALTEAKEGKDLADIQSIISVTSGPILQSFSRAETSTPDNCKIKQSFGSSGSSGTPSSEYHEEEAQDAFAAEFRRMKLKGEFPCRLCTAVFPNLRALKGHNRAHMGVGPGMPYPCNMCSYSSTDKATLIRHLRSHNGDRPYECSLCNYAFTTKANCERHVRNRHGKLSREEIKSVLIYHPSEDSTNDGSLERTSPRGLVRDDVRKTLIYPNERDNLTPQPPQHYPGEIRIKDEAKLRQPGLPGLHPINLNHFDKSELFSRPPTMQPLELTQYRNELEKAQQMKHLDDDLDSGCSDETGSLVHETKADSHQRLQASPIDLKKSSGNESSPAAEGGNGEDAPLDLTMDVLDLSKKANAAAAAAAAAAAAAMKEKDSGDVNGNAENLGGDQKNSFYNTSQLLLTQALLKSVGQTGVQSSSLEALYANAHMLYRNFGTFPHVGSGILQPYLFNPHLFGPDRMQKEMVRGLQTSGGSLVEPPIPGYGAAFPQNRSTLAAHAVTDQSNYASLMSSKMMSKSSMPSREKMETSPSSNSVKMVIKNGVLMPKQKQRRYRTERPFSCEHCSAKFTLRSNMERHIKQQHPQHWSQRPRGGHSTRGRPPANPPTLLQNLGQTSAQLAQSYSSLMPKVGQPMNLDYGKRSISDQVKYAILAQQLKGNKSQERDSDEELIIDEESTNVPKEGSAKDASERTLSLLRDKLEANIESKENNESKELKNSEEVKNKIKEEMDDDEAGNGEDAEQQESAHEKSANQSQEVSIKKEVDEDVKMECETEDLASVSEILDNASQHYFQPQYMSDEEGLVASTSDCNQSGSDEKSDSFNSGSGNSCSSKKKKKMKKKKKKKKSAYSMAPNRVICPYCQRPFPWTSSLRRHILTHTGQKPYQCMHCSLLFTTKSNCDRHLLRKHKANANKMRRTRSTSSPEVQEPPAVNNSNNQFQMRNVPERPYKCNQCPSSTFSTLGNLKKHKSTKHGLHGKSSRPESPVSENSPQDCTQESPQEAAQEVQPLQDNPPERSQDYSQDCPKQTDQSGYESQSSGISEPMDTPMPPVNAAKAPEGANNTPQSASEASRSRKTSPRSSPGPTSETPFKCHLCDSGFAERQDCLEHIKDNHEESYEMLVAKGALDMDLEGNEEQPNNQAHQQPTPAPPPSDGEEKRRFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICCRRFTLKHSMLRHRKKHESIDSSMYVGTSGDEDNAPVGPMTQPPTITPRSQHQAQATSNARASLPQVASVATADAAPNSLMRFNPYDKLATLTGKLSAGVSPSALAVDANDNTDNDLISNLLGIRDKSIIDRVLQADSADDAAKLLGVKGNHE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01111241; iTF_01112073; iTF_01112908; iTF_01110407;
90% Identity: iTF_01111241;
80% Identity: -