Basic Information

Insect: Ormyrus pomaceus
Gene Symbol: Rreb1
Assembly: GCA_900474385.1
Location: UCOM01000693.1:39990-46335[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0063 0.61 11.0 0.5 1 23 40 62 40 62 0.96

2 16 0.00037 0.036 14.8 0.0 1 23 77 99 77 99 0.97

3 16 2.2e-07 2.2e-05 25.0 1.3 1 23 105 128 105 128 0.98

4 16 0.21 20 6.2 0.1 1 23 227 251 227 251 0.93

5 16 0.0097 0.94 10.4 2.0 2 23 257 279 256 279 0.96

6 16 0.91 88 4.2 0.7 1 19 332 350 332 352 0.92

7 16 0.065 6.3 7.8 0.1 1 23 465 487 465 487 0.96

8 16 3.5e-05 0.0034 18.1 0.5 1 23 496 518 496 518 0.98

9 16 0.0012 0.12 13.2 2.8 1 23 524 547 524 547 0.97

10 16 0.00078 0.076 13.8 3.0 1 23 942 965 942 965 0.96

11 16 0.00048 0.046 14.5 0.1 3 23 1237 1257 1235 1257 0.97

12 16 0.89 87 4.2 6.5 1 23 1263 1286 1263 1286 0.97

13 16 0.0082 0.79 10.6 2.3 1 23 1327 1351 1327 1351 0.97

14 16 5.3 5.2e+02 1.8 2.5 1 23 1446 1469 1446 1469 0.86

15 16 0.011 1.1 10.2 0.4 2 23 1527 1548 1526 1548 0.94

16 16 1.3 1.3e+02 3.7 8.2 1 23 1554 1576 1554 1576 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0063	0.61	11.0	0.5	1	23	40	62	40	62	0.96
2	16	0.00037	0.036	14.8	0.0	1	23	77	99	77	99	0.97
3	16	2.2e-07	2.2e-05	25.0	1.3	1	23	105	128	105	128	0.98
4	16	0.21	20	6.2	0.1	1	23	227	251	227	251	0.93
5	16	0.0097	0.94	10.4	2.0	2	23	257	279	256	279	0.96
6	16	0.91	88	4.2	0.7	1	19	332	350	332	352	0.92
7	16	0.065	6.3	7.8	0.1	1	23	465	487	465	487	0.96
8	16	3.5e-05	0.0034	18.1	0.5	1	23	496	518	496	518	0.98
9	16	0.0012	0.12	13.2	2.8	1	23	524	547	524	547	0.97
10	16	0.00078	0.076	13.8	3.0	1	23	942	965	942	965	0.96
11	16	0.00048	0.046	14.5	0.1	3	23	1237	1257	1235	1257	0.97
12	16	0.89	87	4.2	6.5	1	23	1263	1286	1263	1286	0.97
13	16	0.0082	0.79	10.6	2.3	1	23	1327	1351	1327	1351	0.97
14	16	5.3	5.2e+02	1.8	2.5	1	23	1446	1469	1446	1469	0.86
15	16	0.011	1.1	10.2	0.4	2	23	1527	1548	1526	1548	0.94
16	16	1.3	1.3e+02	3.7	8.2	1	23	1554	1576	1554	1576	0.98

Sequence Information

Coding Sequence: ATGGGAGAGAGCCGTCATTTGACCGCCGAGACTGGACCTGATCAGCGCGACGGCTACAGCGAGAGCCAAACGGATGTTGCATCATCACCTCTGgtTGACCAGCCGGAGTCAGGAAGCCACCCGTGCCCGGCTTGCCCGCTGATACTCGCAAGCTCGCGACATCTGACGAAGCACCTGCGAGGTCACAATTCACCGCGCAGCACCGACTGCAGCGGCGAGGAGGTCGACTACGCCTGCGGCGTCTGCCGCAAAGTACTGAGCTCCGCGAGCTCCCTGGACCGGCACATACTCGTTCACTCGGGCGAGAGGCCCTTCAAGTGTAAATACTGCGACATGGCCTTCACTACCAACGGCAACATGAACCGACACCTGAGGACGGCTCACACGAGAGTCGCCTCGCCCTCGCACAGCTGCACCGACTCCGAGGGCAGCAGCGACTCCGAGAGACCCCTCCAGCGACGACTCATCGAGGAGGAGTACAACAACAACGAGATCGCCAAGAGGAACAGCCCCACCATCCTCGACAACGAGAAGAGACCGAGGTCGCCCTCCGTCCTCGGCAACAAGCGCAAGCACCCCGACTACGCGGACGACGCCGACAACCATCGGATGCACAAGATCCTCCTCAGCAACTCGAGGACCGAGAGTCGCGCGGCCTACGCCGACTCGCCCCAGACCTACAGCTGCTCGGCCTGCGGCAAGCAGGACTTCGCGACGAGCGCTATGCTCGAGAACCACCTGGAGAGGAACCACCCGGAGCTGCCGATGAAGTGCGACACCTGCAGCATGGCCTTCAAGAACCACCGAGCCCTGAACCTCCACCGCATCAGGATGCACTACAACGAGGTCCTCAGTCAGAAGAACGCCCAGGACTCCGTGGTCGGCTTCAACGACCTCACCTGCATCGACTTCACTTCCGACAAGTTCCCGGCGATCGCCCGGGCCGTTTGCGAGCAGTCGCTGCATCGGCCACCTTCCGGCGAGTCCCTCAAGTACCAATGCTCCAAGTGCCTACGAGCCTTCCCCTGCCGATCGGCCTTGGTGTCCCACGAGACCGACTGCGGACTGGTGCTACCCGCGGATCACCGAATCCACGACGACCAGTCGAGGAGAGACGACTTCTTCGCCGGCCTCGACCTCCAGAACAAGGCTGCCTTGACGGAGGCCAAGGAGGGCAAGGATCTCGCCGACATTCAAAGCATCATCTCCGTCACGTCCGGACCGATTTTACAGAGCTTCTCAAGGGCGGAGACCAGCACCCCCGACAACTGCAAGATCAAGCAGAGCTTCGGTTCGTCCGGCTCGTCCGGCACGCCATCCTCCGAATACCACGAGGAGGAGGCGCAGGACGCTTTCGCCGCCGAGTTCCGGCGAATGAAGCTCAAGGGCGAGTTCCCCTGCCGACTTTGCACCGCGGTTTTCCCGAATCTGCGCGCCCTCAAGGGCCACAATCGAGCCCACATGGGCGTCGGCCCGGGAATGCCGTACCCCTGCAACATGTGCTCGTACAGCAGCACCGACAAGGCCACGCTCATCAGGCACCTGAGGTCTCACAACGGCGACAGGCCCTACGAGTGCTCCCTCTGCAACTACGCCTTCACGACCAAAGCCAACTGCGAGAGGCACGTGAGGAATCGACACGGAAAGCTGTCCCGCGAGGAGATCAAGAGCGTCCTCATCTATCATCCGAGCGAGGACTCCACCAACGACGGCAGCCTCGAAAGAACCTCCCCCCGCGGCCTCATGAGGGACGACGTTCGCAAAACTCTGATCTATCCCAACGAGCGCGACAATCTGACTCCCCAGCCGCCGCAGCAGTACCCCGGCGAAATCAGAATCAAGGACGAAGCCAAACTCAGGCAGCCGGGACTGCCCGGACTGCACCCCATCAACTTGAATCACTTCGACAAAACCGAGCTCTTCTCCAGGCCTCCGACGATGCAGCCGCTCGAGCTCACCCAGTACAGAAACGAACTGGAGAAGGCCCAGCAGATGAAGCACCTGGACGACGACCTCGACTCCGGCTGCTCCGACGAGACCGGATCCCTAGTCCACGATACCAAAGCAGACTCTCACCAAAGACTCCAGGCCAGCCCGATAGACTTGAAGAAGAGCAGCGGCAACGAATCCTCGCCCGCCGCCGAGGGAGGAAACGGGGAGGACGCCCCGCTCGACCTCACCATGGACGTGCTCGACCTGAGCAAGAAGGCCaacgccgctgccgccgccgccgccgcggccgctgcGGCCGCAGCCGCTGCCATGAAGGAGAAGGAGAGCGGCGACGTCAACGAGAACGCCGAGAACCTCAGCGGCGATCAGAAGAACAGCTTCTACAACACCAGCCAGCTGCTCCTCACGCAGGCGCTGCTCAAGAGCGTCGGTCAAACCGGCGTTCAGTCCTCGTCGCTCGAGGCTCTCTACGCCAACGCTCACATGCTCTACCGCAACTTCGGCACGTTCCCCCACGTCGGCAGCGGTATCCTGCAGCCCTACCTCTTCAATCCGCACCTCTTCGGCCCGGACAGAATGCAGAAGGAGATGGTCCGCGGCCTTCAGACCAGCGGCGGAAGCCTGGTCGAGCCCCCCATTCCGGGGTACGGCGCGGCCTTCCCCCAGAACCGAAGCACCCTCGCGGCTCACGCGGTCACCGACCAGAGCAACTACGCCAGTCTCATGTCCTCGAAGATGTTGAGCAAGAGCAGCCTGCCCTCCCGGGAGAAGATGGAGACGTCGCCATCCTCGAACTCCGTCAAGATGGTCATCAAGAACGGCGTGCTGATGCCGAAGCAGAAGCAGCGCCGCTACAGGACCGAGCGGCCCTTCAGCTGCGAGCACTGCTCCGCCAAGTTCACTCTCCGAAGCAACATGGAGCGACACATAAAGCAGCAGCATCCCCAGCACTGGAGCCAGAGGCCGAGAGGCGGACACTCGACCAGGGGAAGACCGCCGGCGAATCCGCCGACTCTTCTGCAAAACTTGGGACAGACCTCCGCTCAGCTGGCTCAGTCTTACACCAGTTTGATGCCTAAAGTGGGCCAGCCGATGAATCTGGACTACGGGAAGCGATCCATTTCGGATCAGGTCAAGTATGCCATTTTAGCTCAGCAATTGAAGGGCAACAAGTCGCAAGATCGCGACTCTGACGAGGAACTTATTATCGACGAAGAATCGACTAATGTCCCGAAGGAAGGATCGGCAAAAGATGCTACGGAAAGGACACTGAGTCTCTTGAGAGACAAATTGGAAGCCAACATCGAGtccaaagaaaataatgaatctaAAGAGATGAAAAATTCTGAGGAGgctaagaataaaataaaagaagaaatggaCGATGACGAAAACGACGAGGATGCAGATCAACAGGAATCCGCTCATGAAAAATCGGCTAATCAATCGCAGGAAGTGaccataaaaaaagaagtcgaCGAGGACGTTAAAATGGAATGCGAGACCGAAGATCTGGCCAGCGTTTCCGAAATTTTGGACAACGCCTCGCAGCACTACTTTCAGCCTCAGTACATGAGCGACGAGGAAGGCTTGGTGGCCTCGACCAGCGACTGCAATCAATCCGGCAGCGACGAGAAGTCCGACTCGTTCAATTCGGGCTCCGGCAACTCTTGCTCCtccaaaaagaagaagaagatgaagaagaagaagaagaagaagaagtccGCCTACTCGATGGCACCGAATCGAGTGATCTGCCCCTACTGCCAACGTCCGTTCCCCTGGACCTCCTCGCTCAGGCGGCACATCCTCACGCACACCGGGCAAAAGCCCTACCAGTGCATGCATTGCTCTCTACTCTTCACGACCAAGTCCAACTGCGACCGCCACCTGCTGAGAAAACACAAGGCCAACGCCAACAAAATGCGGAGGACCCGCAGCACCTCGTCGCCCGAAGTCCAAGAGCCGCCTGCAatcaacaacagcaacaaccAGTTTCAAATGAGGAACGTACCCGAGAGGCCGTACAAATGCAATCAGTGCCCGAGCTCGACCTTCTCCACCCTCGGCAACCTCAAGAAGCACAAATCGACGAAGCACGGCCTGCACGGCAAGAGCTCCAGGCCCGAGTCACCAGTCAGCGAGAACAGCCCTCAGGACTGCACTCAGGAATCTCCTCAAGAGGCTGCTCAGGAAACCGACCAAAGCGGCTACGAGAGCCAATCCTCGGGCATCTCCGAGCCCATGGACACCCCCATGGTGCCCATCAACGCGGCAAAAGCTCCCGAGAGCGCCAACAACACACCTCAGTCTGCCGGCGAGGCCTCCCGATCGAGGAAGACCTCGCCGAGATCGTCGCCCGGACCCACCTCCGAAACACCCTTCAAGTGCCATCTGTGCGACAGCGGATTCGCCGAGAGGCAGGACTGCCTCGAGCACATCAAGGATAACCACGAAGAATCCTACGAAATGCTCGTGGCCAAGGGCGCCTTGGACATGGATCTCGAAGGCAACGACGAGCAGCCGAGCAACAACCAAGCCCAGCAACCACCGACAGCTCCGGCTCCACCTCCGAGCGACGGCGAGGAGAAGCGCCGATTCCCCGACTACAGCAACCGAAAGGTCGTCTGCGCCTTCTGCATGCGCCGCTTCTGGTCGGCGGAGGACCTGCGCCGACACATGCGCACGCACACCGGCGAGCGCCCGTTCTCCTGCGACATCTGCTGCCGGCGATTCACCCTCAAACACAGCATGCTGCGCCACCGCAAGAAGCACGAGTCCATCGACTCGAGCATGTACGTCGGCACGAGCGGCGACGAGGACAACGTCCCCGTCGGCCCGATGACCCAGCCGCCCACGATAACCCCCCGCAGCCAGCATCAGGTCCAGGCCGCCAACAATACGCGCGCCTCCCTGCCGCAGGTGGCGAGCGTCGCCACCGCCGACGCCGCGCCCAACTCGCTCATGCGCTTCAACCCCTACGACAAGCTCGCCACCCTCACCGGCAAGCTCAGCTCCCCCAACAGCCTGGCGGTCGACGCCAACGACAACACCGACAACGACCTCATCTCGAACCTCCTCGGCATCCGGGACAAGAGCATCATCGACCGCGTCCTCCAGGCGGACTCGGCCGACGACGCCGCCAAGCTCCTCGGCGTCAAGGGTAACCACGAATGA
Protein Sequence: MGESRHLTAETGPDQRDGYSESQTDVASSPLVDQPESGSHPCPACPLILASSRHLTKHLRGHNSPRSTDCSGEEVDYACGVCRKVLSSASSLDRHILVHSGERPFKCKYCDMAFTTNGNMNRHLRTAHTRVASPSHSCTDSEGSSDSERPLQRRLIEEEYNNNEIAKRNSPTILDNEKRPRSPSVLGNKRKHPDYADDADNHRMHKILLSNSRTESRAAYADSPQTYSCSACGKQDFATSAMLENHLERNHPELPMKCDTCSMAFKNHRALNLHRIRMHYNEVLSQKNAQDSVVGFNDLTCIDFTSDKFPAIARAVCEQSLHRPPSGESLKYQCSKCLRAFPCRSALVSHETDCGLVLPADHRIHDDQSRRDDFFAGLDLQNKAALTEAKEGKDLADIQSIISVTSGPILQSFSRAETSTPDNCKIKQSFGSSGSSGTPSSEYHEEEAQDAFAAEFRRMKLKGEFPCRLCTAVFPNLRALKGHNRAHMGVGPGMPYPCNMCSYSSTDKATLIRHLRSHNGDRPYECSLCNYAFTTKANCERHVRNRHGKLSREEIKSVLIYHPSEDSTNDGSLERTSPRGLMRDDVRKTLIYPNERDNLTPQPPQQYPGEIRIKDEAKLRQPGLPGLHPINLNHFDKTELFSRPPTMQPLELTQYRNELEKAQQMKHLDDDLDSGCSDETGSLVHDTKADSHQRLQASPIDLKKSSGNESSPAAEGGNGEDAPLDLTMDVLDLSKKANAAAAAAAAAAAAAAAAMKEKESGDVNENAENLSGDQKNSFYNTSQLLLTQALLKSVGQTGVQSSSLEALYANAHMLYRNFGTFPHVGSGILQPYLFNPHLFGPDRMQKEMVRGLQTSGGSLVEPPIPGYGAAFPQNRSTLAAHAVTDQSNYASLMSSKMLSKSSLPSREKMETSPSSNSVKMVIKNGVLMPKQKQRRYRTERPFSCEHCSAKFTLRSNMERHIKQQHPQHWSQRPRGGHSTRGRPPANPPTLLQNLGQTSAQLAQSYTSLMPKVGQPMNLDYGKRSISDQVKYAILAQQLKGNKSQDRDSDEELIIDEESTNVPKEGSAKDATERTLSLLRDKLEANIESKENNESKEMKNSEEAKNKIKEEMDDDENDEDADQQESAHEKSANQSQEVTIKKEVDEDVKMECETEDLASVSEILDNASQHYFQPQYMSDEEGLVASTSDCNQSGSDEKSDSFNSGSGNSCSSKKKKKMKKKKKKKKSAYSMAPNRVICPYCQRPFPWTSSLRRHILTHTGQKPYQCMHCSLLFTTKSNCDRHLLRKHKANANKMRRTRSTSSPEVQEPPAINNSNNQFQMRNVPERPYKCNQCPSSTFSTLGNLKKHKSTKHGLHGKSSRPESPVSENSPQDCTQESPQEAAQETDQSGYESQSSGISEPMDTPMVPINAAKAPESANNTPQSAGEASRSRKTSPRSSPGPTSETPFKCHLCDSGFAERQDCLEHIKDNHEESYEMLVAKGALDMDLEGNDEQPSNNQAQQPPTAPAPPPSDGEEKRRFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICCRRFTLKHSMLRHRKKHESIDSSMYVGTSGDEDNVPVGPMTQPPTITPRSQHQVQAANNTRASLPQVASVATADAAPNSLMRFNPYDKLATLTGKLSSPNSLAVDANDNTDNDLISNLLGIRDKSIIDRVLQADSADDAAKLLGVKGNHE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01113682;
90% Identity: iTF_01111241;
80% Identity: -