Basic Information

Insect: Ormyrus rosae
Gene Symbol: Rreb1
Assembly: GCA_035047165.1
Location: JAWWML010000001.1:28951761-28965125[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0077 0.9 11.0 0.5 1 23 54 76 54 76 0.96

2 16 0.00045 0.053 14.8 0.0 1 23 91 113 91 113 0.97

3 16 2.7e-07 3.2e-05 25.0 1.3 1 23 119 142 119 142 0.98

4 16 0.26 30 6.2 0.2 1 23 241 265 241 265 0.93

5 16 0.012 1.4 10.4 2.0 2 23 271 293 270 293 0.96

6 16 1.1 1.3e+02 4.2 0.7 1 19 346 364 346 366 0.92

7 16 0.079 9.3 7.8 0.1 1 23 479 501 479 501 0.96

8 16 4.2e-05 0.0049 18.1 0.5 1 23 510 532 510 532 0.98

9 16 0.0015 0.17 13.2 2.8 1 23 538 561 538 561 0.97

10 16 0.00095 0.11 13.8 3.0 1 23 955 978 955 978 0.96

11 16 0.00058 0.068 14.5 0.1 3 23 1250 1270 1248 1270 0.97

12 16 1.1 1.3e+02 4.2 6.5 1 23 1276 1299 1276 1299 0.97

13 16 0.0099 1.2 10.6 2.3 1 23 1340 1364 1340 1364 0.97

14 16 6.5 7.6e+02 1.7 2.5 1 23 1481 1504 1481 1504 0.86

15 16 0.013 1.6 10.2 0.4 2 23 1562 1583 1561 1583 0.94

16 16 1.6 1.8e+02 3.7 8.2 1 23 1589 1611 1589 1611 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0077	0.9	11.0	0.5	1	23	54	76	54	76	0.96
2	16	0.00045	0.053	14.8	0.0	1	23	91	113	91	113	0.97
3	16	2.7e-07	3.2e-05	25.0	1.3	1	23	119	142	119	142	0.98
4	16	0.26	30	6.2	0.2	1	23	241	265	241	265	0.93
5	16	0.012	1.4	10.4	2.0	2	23	271	293	270	293	0.96
6	16	1.1	1.3e+02	4.2	0.7	1	19	346	364	346	366	0.92
7	16	0.079	9.3	7.8	0.1	1	23	479	501	479	501	0.96
8	16	4.2e-05	0.0049	18.1	0.5	1	23	510	532	510	532	0.98
9	16	0.0015	0.17	13.2	2.8	1	23	538	561	538	561	0.97
10	16	0.00095	0.11	13.8	3.0	1	23	955	978	955	978	0.96
11	16	0.00058	0.068	14.5	0.1	3	23	1250	1270	1248	1270	0.97
12	16	1.1	1.3e+02	4.2	6.5	1	23	1276	1299	1276	1299	0.97
13	16	0.0099	1.2	10.6	2.3	1	23	1340	1364	1340	1364	0.97
14	16	6.5	7.6e+02	1.7	2.5	1	23	1481	1504	1481	1504	0.86
15	16	0.013	1.6	10.2	0.4	2	23	1562	1583	1561	1583	0.94
16	16	1.6	1.8e+02	3.7	8.2	1	23	1589	1611	1589	1611	0.98

Sequence Information

Coding Sequence: ATGAGCCTGCAGCTCGTTCTTCCACCACCGCCGAGTGGGATCGGCATGGAACTTGCGACCGTGACCGCCGAGACTGGACCTGATCAGCGCGACGGCTACAGCGAGAGCCAAACGGATGTTGCATCATCACCTCTGGTTGACCAGCCGGAGTCAGGAAGCCACCCGTGCCCGGCTTGCCCGCTGATACTCGCAAGCTCGCGACATCTGACGAAGCACCTGCGAGGCCACAATTCCCCGCGCAGCACCGACTGCAGCGGCGAGGAGGTCGACTACGCCTGCGGCGTCTGCCGCAAAGTACTGAGCTCCGCGAGCTCCCTGGACCGGCACATACTCGTTCACTCGGGCGAGAGGCCCTTCAAGTGTAAATACTGCGACATGGCCTTCACAACGAACGGCAACATGAACCGACACCTGAGGACGGCTCACACGAGAGTCGCCTCGCCCTCCCACAGCTGCACCGACTCCGAGGGCAGCAGCGACTCCGAGAGACCCCTCCAGCGACGACTCATCGAGGAGGAGTACAACAACAACGAGATCGCCAAGAGGAACAGCCCCACCATCCTCGACAACGAGAAGAGACCGAGGTCGCCCTCCGTCCTCGGCAACAAGCGCAAGCACCCCGACTACGCGGACGACGGCGACAACCATCGGATGCACAAGATCCTCCTCGGCAACTCGAGGACCGAGAGCCGCTCGGCCTACGCCGACTCTCCCCAGACCTACAGCTGCTCGGCCTGCGGCAAGCAGGACTTCGCGACGAGCGCCATGCTCGAGAACCACCTCGAGAGGAAGCACCCGGAGCTGCCGATGAAGTGCGACACCTGCAGCATGGCATTCAAGAACCACCGAGCGCTGAACCTCCACCGCATCAGGATGCACTACAACGAGGTGCTCAGCCAGAAGAACGCCCAAGACTCCGTGGTCGGCTTCAACGATCTCACCTGCATCGACTTCACTTCCGACAAGTTCCCGGCGATCGCCCGGGCCGTTTGCGAGCAGTCGCTCCATCGGCCACCTTCCGGCGAATCGCTCAAGTACCAATGCTCCAAGTGCCTAAGAGCCTTCCCCTGCCGATCGGCCCTGGTGTCCCACGAGACCGACTGCGGACTGGTGCTACCCGCAGATCACCGAATCCACGACGACCAGTCGAGGAGAGACGACTTCTTCGCCGGCCTCGACCTCCAGAACAAGGCTGCCTTGACCGAGGCCAAGGAGGGCAAAGATCTCGCCGACATTCAAAGCATCATCTCCGTCACGTCCGGACCCATTTTACAGAGCTTCTCAAGGGCGGAGACCAGCACCCCCGACAACTGCAAGATCAAGCAGAGCTTCGGATCGTCCGGCTCCTCCGGCACCCCATCTTCCGAATACCACGAGGAGGAGGCGCAGGACGCGTTCGCCGCCGAGTTCCGCCGGATGAAGCTCAAGGGCGAGTTCCCCTGCCGACTTTGCACCGCGGTTTTCCCGAATCTCCGCGCCCTCAAGGGCCACAATCGAGCCCACATGGGCGTCGGCCCGGGAATGCCGTACCCCTGCAACATGTGCTCGTACAGCAGCACCGACAAGGCCACGCTCATCAGGCACCTGAGATCGCACAACGGCGACAGGCCCTACGAGTGCTCCCTCTGCAACTACGCCTTCACGACCAAAGCCAACTGCGAGAGGCACGTGAGGAATCGACACGGAAAGCTGTCCCGGGAGGAGATCAAGAGCGTCCTCATCTACCATCCGAGCGAGGACTCCACCAACGACGGCAGCCTCGAAAGAACCTCCCCCCGCGGACTCATGAGGGACGACGTTCGCAAAACTCTGATCTACCCCAATGAGCGCGACAATCTGACTCCGCAGCCGCCGCAGCAGTACCCCGGCGAGATCAGAATCAAGGATGAAGCCAAACTCCGGCAGCCGGGACTGTCCGGACTACACCCCATCAACTTGAATCACTTCGACAAAACCGAGCTCTTCTCCAGGCCTCCGACGATGCAGCCGCTCGAGCTCACCCAGTACAGAAACGAACTGGAGAAGGCTCAGCAGATGAAGCACCTGGACGACGACCTCGACTCCGGCTGCTCCGACGAGACCGGATCCCTAGTCCACGATACCAAAGCAGACTCTCACCAAAGACTCCAGGCCAGCCCGATCGACTTGAAAAAGAGCAGCGGCAACGAATCCTCGCTCGCCGCCGAAGGAGGAAACGGGGAGGACGCCCCGCTCGACCTCACCATGGACGTGCTCGACCTCAGCAAGAAGGccaacgccgccgccgcagccgccgcggccgctgcGGCTGCAGCCGCTGCCATGAAGGAGAAGGAGAGCGGCGACGTCAGCGAGAACGCCGAGAACCTCAGCGGCGATCAGAAGAATAGCTTCTACAACACCAGCCAGCTGCTCCTCACGCAGGCGCTGCTCAAGAGCGTCGGGCAAACCGGCGTACAGTCCTCGTCGCTCGAGGCTCTCTACGCCAACGCTCACATGCTCTACCGCAACTTCGGCACGTTCCCTCACGTCGGCAGCGGGATCCTGCAGCCCTACCTCTTCAATCCGCACCTCTTCGGCCCGGACAGAATGCAGAAGGAGATGGTCCGCGGCCTTCAGACCAGCGGCGGAAGCCTGGTCGAGCCCCCGATCCCGGGGTACGGCGCGGCCTTCCCCCAGAACCGAAGCACCCTCGCCGCTCACGCGGTAACCGACCAGAGCAACTACGCCAGTCTCATGTCCTCGAAAATGATGAACAAGAGCAGCCTGCCCTCCCGGGAGAAGATGGAGACGTCGCCCTCGTCCAACTCCGTCAAGATGGTCATCAAGAACGGCGTGCTGATGCCGAAGCAGAAGCAGCGCCGCTACAGGACCGAGCGGCCCTTCAGCTGCGAGCACTGCTCCGCCAAATTCACTCTCCGTAGCAACATGGAGCGACACATAAAGCAGCAGCATCCCCAGCACTGGAGCCAGAGACCGAGAGGCGGACACTCGACCAGGGGAAGACCGCCCGCGAATCCACCGACTCTTCTGCAAAACCTGGGACAAACCTCCGCTCAGCTGGCTCAGTCTTACTCCAGTTTGATGCCCAAAGTGGGCCAGCCGATGAATCTCGACTACGGGAAGCGATCCATTTCGGATCAGGTCAAGTATGCCATTTTAGCTCAGCAATTGAAGGGCAACAAGTCGCAAGATCGCGACTCTGACGAGGAACTGATCATCGACGAAGAATCGACTAACGTCCCGAAGGAAGGATCGGCAAAAGATGCTACGGAAAGGACACTCAGTCTTTTGAGAGACAAATTGGAAGCCAACATCGAGTCCAAAGAAAATCATGAATCTAAAGAGATGAAAAATTCTGAGGAagctaagaataaaataaaagaagaaatggaCGAGGACGAAAATGACGAGGATGCAGATCAACAGGAATCCGCTCGTGAAAAATCGGCTAATCAATCGCAGGAAGTGGCCATAAAAAAGGAAGTCGACGAGGACGTTAAAATGGAATGCGAGACCGAAGATCTGGCCAGCGTTTCTGAAATTTTGGACAACGCCTCGCAGCACTACTTTCAGCCTCAGTACATGAGCGACGAGGAAGGCTTGGTGGCCTCGACCAGCGACTGCAATCAATCCGGCAGCGACGAGAAGTCCGACTCCTTCAATTCGGGCTCCGGCAACTCTTGCTcctcgaaaaagaagaagaagatgaagaagaagaagaagaagaagaagtccGCCTACTCGATGGCACCGAATCGAGTGATCTGCCCCTACTGCCAACGTCCGTTCCCCTGGACCTCGTCCCTCAGGCGACACATCCTCACGCACACCGGGCAAAAGCCCTACCAGTGCATGCATTGCTCTCTACTCTTCACGACCAAGTCCAACTGCGACCGCCACCTGCTAAGAAAACACAAGGCCAACGCCAACAAGATGCGGAGGACTCGCAGCACCTCGTCGCCCGAAGTCCAAGAGCCGCCCGCAatcaacaacagcaacaaccAGTTTCAAATGAGGAATGTACCCGAGAGGCCGTACAAATGCAATCAGTGCCCGAGCTCGACCTTCTCCACCCTCGGCAACCTCAAGAAGCACAAATCGACGAAGCACGGCCTGCACGGCAAGAGCTCCAGGCCCGAGTCACCAGTCAGCGAGAACAGTCCTCAGGACTGCACTCAGGAATCTCCTCAAGAGGCTGCTCAGGAAGTCCAGCCACTCCAGGATAATCCTCCAGAGCGCTCCCAAGACTACTCGCAGGACTGCCCGAAGCAGACCGACCAAAGCGGCTACGAGAGCCAATCGTCGGGCATCTCGGAGCCCATGGACACCCCCATGGTGCCCATCAATGCGGCAAAAGCTCCCGAGAGCGCCAACAACACACCTCAGTCGGCCGGCGAGGCCTCCCGATCGAGGAAGACCTCGCCGAGATCGTCGCCCGGACCCACCTCCGAAACGCCCTTCAAGTGCCATCTGTGCGACAGCGGATTCGCCGAGAGGCAGGACTGCCTCGAGCACATCAAGGATAACCACGAAGAATCCTACGAAATGCTCGTGGCCAAGGGCGCCCTGGACATGGATCTGGAAGGCAACGACGAGCAGCCGAACAACAACCAAGCCCAGCAACCACCCCAAGCTCCGGCTCCACCTCCGAGCGACGGCGAGGAGAAGCGCCGATTCCCCGACTACAGCAACCGAAAGGTCGTCTGCGCCTTCTGCATGCGCCGCTTCTGGTCGGCGGAGGACCTGCGCCGACACATGCGCACGCACACCGGCGAGCGGCCGTTCTCCTGCGACATCTGCTGCCGGCGATTCACCCTCAAGCACAGCATGCTGCGCCACCGCAAGAAGCACGAGTCCATCGACTCGAGCATGTACGTCGGCACGAGCGGCGACGAGGACAACGTACCCGTCGGCCCGATGACCCAGCCGCCCACGATAACCCCCCGCAGCCAGCATCAGGTCCAGGCCGCCAACaacgcgcgcgcctccctGCCGCAGGTGGCGAGCGTCGCCACCGCCGACGCCGCGCCCAACTCGCTCATGCGCTTCAACCCCTACGACAAGCTCGCCACCCTCACCAACAGCCTGGCGGTCGACGCCAACGACAACACCGACAACGACCTCATCTCGAACCTCCTCGGCATCCGGGACAAGAGCATCATCGACCGCGTCCTCCAGGCGGACTCGGCCGACGACGCCGCCAAGCTCCTCGGCGTCAAGGGTAACCACGAATGA
Protein Sequence: MSLQLVLPPPPSGIGMELATVTAETGPDQRDGYSESQTDVASSPLVDQPESGSHPCPACPLILASSRHLTKHLRGHNSPRSTDCSGEEVDYACGVCRKVLSSASSLDRHILVHSGERPFKCKYCDMAFTTNGNMNRHLRTAHTRVASPSHSCTDSEGSSDSERPLQRRLIEEEYNNNEIAKRNSPTILDNEKRPRSPSVLGNKRKHPDYADDGDNHRMHKILLGNSRTESRSAYADSPQTYSCSACGKQDFATSAMLENHLERKHPELPMKCDTCSMAFKNHRALNLHRIRMHYNEVLSQKNAQDSVVGFNDLTCIDFTSDKFPAIARAVCEQSLHRPPSGESLKYQCSKCLRAFPCRSALVSHETDCGLVLPADHRIHDDQSRRDDFFAGLDLQNKAALTEAKEGKDLADIQSIISVTSGPILQSFSRAETSTPDNCKIKQSFGSSGSSGTPSSEYHEEEAQDAFAAEFRRMKLKGEFPCRLCTAVFPNLRALKGHNRAHMGVGPGMPYPCNMCSYSSTDKATLIRHLRSHNGDRPYECSLCNYAFTTKANCERHVRNRHGKLSREEIKSVLIYHPSEDSTNDGSLERTSPRGLMRDDVRKTLIYPNERDNLTPQPPQQYPGEIRIKDEAKLRQPGLSGLHPINLNHFDKTELFSRPPTMQPLELTQYRNELEKAQQMKHLDDDLDSGCSDETGSLVHDTKADSHQRLQASPIDLKKSSGNESSLAAEGGNGEDAPLDLTMDVLDLSKKANAAAAAAAAAAAAAAAMKEKESGDVSENAENLSGDQKNSFYNTSQLLLTQALLKSVGQTGVQSSSLEALYANAHMLYRNFGTFPHVGSGILQPYLFNPHLFGPDRMQKEMVRGLQTSGGSLVEPPIPGYGAAFPQNRSTLAAHAVTDQSNYASLMSSKMMNKSSLPSREKMETSPSSNSVKMVIKNGVLMPKQKQRRYRTERPFSCEHCSAKFTLRSNMERHIKQQHPQHWSQRPRGGHSTRGRPPANPPTLLQNLGQTSAQLAQSYSSLMPKVGQPMNLDYGKRSISDQVKYAILAQQLKGNKSQDRDSDEELIIDEESTNVPKEGSAKDATERTLSLLRDKLEANIESKENHESKEMKNSEEAKNKIKEEMDEDENDEDADQQESAREKSANQSQEVAIKKEVDEDVKMECETEDLASVSEILDNASQHYFQPQYMSDEEGLVASTSDCNQSGSDEKSDSFNSGSGNSCSSKKKKKMKKKKKKKKSAYSMAPNRVICPYCQRPFPWTSSLRRHILTHTGQKPYQCMHCSLLFTTKSNCDRHLLRKHKANANKMRRTRSTSSPEVQEPPAINNSNNQFQMRNVPERPYKCNQCPSSTFSTLGNLKKHKSTKHGLHGKSSRPESPVSENSPQDCTQESPQEAAQEVQPLQDNPPERSQDYSQDCPKQTDQSGYESQSSGISEPMDTPMVPINAAKAPESANNTPQSAGEASRSRKTSPRSSPGPTSETPFKCHLCDSGFAERQDCLEHIKDNHEESYEMLVAKGALDMDLEGNDEQPNNNQAQQPPQAPAPPPSDGEEKRRFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICCRRFTLKHSMLRHRKKHESIDSSMYVGTSGDEDNVPVGPMTQPPTITPRSQHQVQAANNARASLPQVASVATADAAPNSLMRFNPYDKLATLTNSLAVDANDNTDNDLISNLLGIRDKSIIDRVLQADSADDAAKLLGVKGNHE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01113682;
90% Identity: iTF_01111241;
80% Identity: -