Basic Information

Insect: Ormyrus thymus
Gene Symbol: -
Assembly: GCA_035582935.1
Location: JAWWEM010000303.1:317-4734[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.0088 1.2 10.7 2.4 1 23 347 369 347 369 0.98

2 18 0.086 12 7.6 1.5 2 23 415 436 415 436 0.95

3 18 0.00035 0.047 15.1 0.2 2 23 498 519 497 519 0.97

4 18 1.7e-05 0.0023 19.2 2.6 2 23 564 585 563 585 0.97

5 18 4.3e-05 0.0057 18.0 8.6 1 23 590 612 590 613 0.96

6 18 0.00059 0.079 14.4 0.8 1 21 619 639 619 643 0.92

7 18 0.021 2.8 9.5 4.1 2 23 723 744 722 744 0.96

8 18 8.9e-05 0.012 17.0 3.5 1 23 792 814 792 814 0.97

9 18 0.00032 0.042 15.2 0.7 1 20 819 838 819 840 0.94

10 18 0.19 26 6.5 0.2 2 23 851 872 851 872 0.97

11 18 1.4e-05 0.0019 19.4 0.7 2 23 910 931 909 931 0.97

12 18 2.9e-05 0.0039 18.5 1.6 1 23 936 958 936 958 0.95

13 18 1.9e-05 0.0026 19.0 1.4 1 23 964 986 964 986 0.99

14 18 5.2e-06 0.00069 20.8 0.4 1 23 1002 1024 1002 1024 0.95

15 18 4.2e-07 5.6e-05 24.3 0.6 1 23 1030 1052 1030 1052 0.99

16 18 4.6e-05 0.0061 17.9 0.2 1 23 1058 1080 1058 1080 0.97

17 18 0.00017 0.023 16.1 4.1 1 23 1086 1108 1086 1108 0.96

18 18 0.0072 0.96 11.0 0.7 1 20 1114 1133 1114 1135 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.0088	1.2	10.7	2.4	1	23	347	369	347	369	0.98
2	18	0.086	12	7.6	1.5	2	23	415	436	415	436	0.95
3	18	0.00035	0.047	15.1	0.2	2	23	498	519	497	519	0.97
4	18	1.7e-05	0.0023	19.2	2.6	2	23	564	585	563	585	0.97
5	18	4.3e-05	0.0057	18.0	8.6	1	23	590	612	590	613	0.96
6	18	0.00059	0.079	14.4	0.8	1	21	619	639	619	643	0.92
7	18	0.021	2.8	9.5	4.1	2	23	723	744	722	744	0.96
8	18	8.9e-05	0.012	17.0	3.5	1	23	792	814	792	814	0.97
9	18	0.00032	0.042	15.2	0.7	1	20	819	838	819	840	0.94
10	18	0.19	26	6.5	0.2	2	23	851	872	851	872	0.97
11	18	1.4e-05	0.0019	19.4	0.7	2	23	910	931	909	931	0.97
12	18	2.9e-05	0.0039	18.5	1.6	1	23	936	958	936	958	0.95
13	18	1.9e-05	0.0026	19.0	1.4	1	23	964	986	964	986	0.99
14	18	5.2e-06	0.00069	20.8	0.4	1	23	1002	1024	1002	1024	0.95
15	18	4.2e-07	5.6e-05	24.3	0.6	1	23	1030	1052	1030	1052	0.99
16	18	4.6e-05	0.0061	17.9	0.2	1	23	1058	1080	1058	1080	0.97
17	18	0.00017	0.023	16.1	4.1	1	23	1086	1108	1086	1108	0.96
18	18	0.0072	0.96	11.0	0.7	1	20	1114	1133	1114	1135	0.90

Sequence Information

Coding Sequence: ATGGACGCCGTCGGAGTGGACACGTCGGGCGAGCCGCGGccgcagcatcagcagcagcagccacagGTCCTCGATCTCTGCCGCGTCTGCCTGCTCGGCAGCACGGCGATGCGCGACCTCTTCCCCGAGGACGACGGACCCAGCCTCGCTCACAAGGCCATGAGCTTCGCCAGTGTTAAGattttgcCAGGAGATGGATTGCCTTCTCATATTTGCTGTGATTGTAGTGATAAACTTGACTCTGCTTACAAGTTCAAATTACAAGTTGAACAAGCCGATAATGTATTGCGAGAAAGACTGGATTCCTTAAACATAAAGGAAGAACTCTTTTTTAGCGATGTAGATGTAAATTTGGCAGCCCACAGAAATGATGTTGGAGAAATCACTgaagaaagtttaattttaaaagatcaCCACATGCACatggatttattaaatgtacaaaaaaaaatatataatggaCAAGATATACTGCATCATCAGAGGGATGATTTAGAAACACCAAATGATAATATTGGTATAGAACAACACGAGGAAGTACAAAAAACTGAAGATGAGGAGCAGttgcaaattaataataaaaaagatgttactgttaataataatcaagagATTGAAATGCAACAAATGTCGAGCGAACAAGAAAATCAAGCATTTGAAGCCCAGGAAATACAGGAAATGATGCTCAATGACATAGATGATCAAGAAAGAATGCAAAAGGACATGAATCATGCTCAACAGTTGGCAATGCATGAACATAATTATGTAGCAGAATCATCTGATTTTGCTAATGTAAATGATGTCCAGAATTCAGAGCAACTTGAACATGAtactaaagaaaatattgaaaaagaatcaTTGAATGAAGAAATATACGATGCATCAGTAGAGTCCACAGCTTATGAATCTATTCGTAGAAGCAAACGTAGAATTATTCAACGAAAATCTCAGGTGAATTGCGATTCTGATGAAGAAAACTACTTTGAAAATCTTAATCTTAGTTCTAGATtgaaaaaagtgcaattgcagaaagtttattttatgtgTTACTTGTgtgaaaaacaatttgtatCAAAGGAAATATTAAAGGAGCACATGCATACTCATGAAGAAGTTAGAAAAACGCTTTCtcttactaataaaaaacCTGTGGAAAAGTTACAGAAATCACCTGAAAAACCTCAAGATACTTCAGTAAACTTATCACCAGCAAAATCACCATCAAGTGGTAAAAAGCCAAATACTTGTCCTCATTGTGGAAAAGAATACCTGtacattatttcatttaataagcATTTAAAACAGCATGAAAAAGTACAGGCAAAGGATGAATCTATGCCTTTAGAAGTTTCCTTTGAAGAGGATGATGATGCTTTAGATTTTCATGATTATGGTGAAAACCCTATAGTAGGTTCTGATAGCGAAGAAgacgaaataaaagaagaaaatcaagATCAGATAAAGCAGGAATTTACAAAGCAAAATTCCATAAAGTGCAACGTTTGTGAAGAAGAATTTGATTCTGCCGATACACTAAAAAATCATCGAGCAAAGCACGTTATGGAGGGTGTGCTTAGTGAACAAAATGATGAACAGTTAGATTCAGGCTTTATaaacgaaaatgaaaacaaagatgaaatcaattttgaagaatctacacctttgaaaaaagaagatgTTAAGGAACTTAAATGTCCTCACTGTCCAATGGTATATACtcacaaaaaaagtttagctCGTCATTTAGAAACTCATTCTTCTCTTAAATACACATGCAAATTATGTACTCAGTCGTTTAGTCGTAAGGATCATTTGCGACATCACATTGAACGGCACCATATTCGTCAAAAAAGCTTCAAATGCACGCAATGTAATAAAAGCTTTGGCAATGAATTGACTTTAAGAAATCATTTGATAGCTACTAATCATAAAACGATTGTGCAAGGTCAGGAATATGATCCTAATAAAAGGATTAAGAGAGTAGCAGCAAAAGCAgcgcaaaaaattattgataagaTTAAAACTGATCTTAATATGGatgaagaagaggaagaggaggaggaaaatgaaagagaaaaagatagAGACTTCATGTTTGCCAAAGAAGAATTTGAGATTCCTGAGGGTGTAAAgACTTCTAAAAAACTTCCacgtaataaaactttaacttGTGCAACTTGTAATCATAAATGTCCAACAAAACAGGCTCTTACAAAACACATGGAGCAACACGTCAAGgacgaaaatttaatcaagcaAGAAAAGAATGTAGTTCAAAAATCTGAAGAAAcccaagaaaaagaagagaatgAAATTGACCATGAAGAAGATGACGATGATTTTGAAGGTGGCCTTGATTGGCCAATGGATAGCCACGAGTGTCCAACGTGCAAAAAACAATACAGCACGAAAAAATCTCTGCTTCGTCATCAATTACTTCATGAGGAACCAAATTTCGAGTGCGATATCTGTAATGTCAAGTTTTACAGAAAAGATAAACTTAAAGCTCACTATGACAAGTGCTCCGAGAAAAATCCAGATCAAGTGCGGAAGTGTAATATTTGCGgcgatatttttgaaaacaatgaaattttgaaggaGCATCGAGCGAAACATGTAATGGAAGGTATACTCACAGAGGAGGATCTTCGAGAAATTGAACCAAGACCAGAGGATCGGAATGGAGAAAAAGCACCGCGAAAGAGGCGTACAGACATTGTTGGACTGGAATGTACAGAATGTAATAAACGTTATACTTCGAGGAAAGGTCTTTTAAGGCACATACAGgTTCATGAGGGTAAAAAGTACTTGTGTGACATATGTCCAAAGAAATTCTACAGGAGAGagcatttgaaaattcacgTAGCCAAACACAATATGATTAAACCGTACAAGTGTCCTCGATGCtcaaaacgttttattaaagaggaacaattaaataatcatatAAGTAAACATGACAAAACATTCAAAAAGGCTAAAGAATCGGATACATCAAAGAGATTTTTGTGCGAAATATGTTCGAAGAGTTTCACGCAATCCACGACACTTATTGCACATTTGAGAGCTCACAATGGCATAAAACCGTACGTTTGCGAAGTCTGCTCCAGGCCTTTCACGACAAACGCTTACTTGAAAATGCATATGAGAACGCACACTCAGGAACGTCCCTACATTTGTCAGTATTGTTCTAGAGCTTTTGCAAGAGCTGATACTTTGGCCAACCACTTAACTTCACATACTGGCGAGGCTAAGTACCACTGTAAGTACTGTCCGAAAAATTTCAGGAGATTGAAATCGCTCAAAGAGCACGTCTTTATTCACACTGGCCAGCGTCCTTATTCTTGTCCCACCTGCGATAGAAGATTCAATAATAACGGAAGCAGATATGCGCATAGCAAGAGATGTAAACAAAATCTGTTGCAGAACAGGACAAATCAAATTACTGTGCAACCACTTACTGTTGAACAAGAACCTCTGATCGTTGAGCAAGAACAAGAAGAACAAGAACACCTGCAATTACAGGAACAGCAGCATCAACAGCTGCAGGAGCAACATTTGCAGCTGCAAACGCAAAGGATACATCAAGCAACCTTAAGCCAGGCTCAGGTCATAAAACCACAAAATGTGAAAACGATCACAATTACGAGGCAAGACGGAGGATTAACTCAGCAGCACGTGATGACGCATCAAGAGATACTTATGCCCTTGATACTTCCGTTAACAGTGACACTCACAGACGTAGGAGATGAGACAATTCTTCCCGAAGGcacgaaaatttttacgacGTAA
Protein Sequence: MDAVGVDTSGEPRPQHQQQQPQVLDLCRVCLLGSTAMRDLFPEDDGPSLAHKAMSFASVKILPGDGLPSHICCDCSDKLDSAYKFKLQVEQADNVLRERLDSLNIKEELFFSDVDVNLAAHRNDVGEITEESLILKDHHMHMDLLNVQKKIYNGQDILHHQRDDLETPNDNIGIEQHEEVQKTEDEEQLQINNKKDVTVNNNQEIEMQQMSSEQENQAFEAQEIQEMMLNDIDDQERMQKDMNHAQQLAMHEHNYVAESSDFANVNDVQNSEQLEHDTKENIEKESLNEEIYDASVESTAYESIRRSKRRIIQRKSQVNCDSDEENYFENLNLSSRLKKVQLQKVYFMCYLCEKQFVSKEILKEHMHTHEEVRKTLSLTNKKPVEKLQKSPEKPQDTSVNLSPAKSPSSGKKPNTCPHCGKEYLYIISFNKHLKQHEKVQAKDESMPLEVSFEEDDDALDFHDYGENPIVGSDSEEDEIKEENQDQIKQEFTKQNSIKCNVCEEEFDSADTLKNHRAKHVMEGVLSEQNDEQLDSGFINENENKDEINFEESTPLKKEDVKELKCPHCPMVYTHKKSLARHLETHSSLKYTCKLCTQSFSRKDHLRHHIERHHIRQKSFKCTQCNKSFGNELTLRNHLIATNHKTIVQGQEYDPNKRIKRVAAKAAQKIIDKIKTDLNMDEEEEEEEENEREKDRDFMFAKEEFEIPEGVKTSKKLPRNKTLTCATCNHKCPTKQALTKHMEQHVKDENLIKQEKNVVQKSEETQEKEENEIDHEEDDDDFEGGLDWPMDSHECPTCKKQYSTKKSLLRHQLLHEEPNFECDICNVKFYRKDKLKAHYDKCSEKNPDQVRKCNICGDIFENNEILKEHRAKHVMEGILTEEDLREIEPRPEDRNGEKAPRKRRTDIVGLECTECNKRYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMIKPYKCPRCSKRFIKEEQLNNHISKHDKTFKKAKESDTSKRFLCEICSKSFTQSTTLIAHLRAHNGIKPYVCEVCSRPFTTNAYLKMHMRTHTQERPYICQYCSRAFARADTLANHLTSHTGEAKYHCKYCPKNFRRLKSLKEHVFIHTGQRPYSCPTCDRRFNNNGSRYAHSKRCKQNLLQNRTNQITVQPLTVEQEPLIVEQEQEEQEHLQLQEQQHQQLQEQHLQLQTQRIHQATLSQAQVIKPQNVKTITITRQDGGLTQQHVMTHQEILMPLILPLTVTLTDVGDETILPEGTKIFTT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01110360; iTF_01112856; iTF_01112026; iTF_01111197;
90% Identity: iTF_01110360; iTF_01112856; iTF_01112026; iTF_01111197;
80% Identity: -