Oros001132.2
Basic Information
- Insect
- Ormyrus rosae
- Gene Symbol
- ttk
- Assembly
- GCA_035047165.1
- Location
- JAWWML010000001.1:15203626-15206103[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 5.7e-05 0.074 13.6 0.0 4 43 227 266 224 268 0.84 2 4 1.3e-12 1.7e-09 38.0 0.0 3 42 276 315 274 318 0.85 3 4 0.0025 3.3 8.3 0.0 7 34 332 358 330 364 0.82 4 4 6.3e-13 8.2e-10 39.1 0.1 4 39 389 424 386 429 0.91
Sequence Information
- Coding Sequence
- ATGTCCAAGACGCTGGATTCGCAGATGCATGTCGACTCCTCGTACTGCTTCAAGTGGAGCCATTATCACAATTACCTATCGGAGGTGGTGCGCCAACTATTGGAAGAAAGATGTATGGTCGACGTTACTCTTGTTGCCGATGGCGAGCGTATTCAGGCGCACCGGGTCATTCTTGGCGCCTGCAGCATTCTATTTCAGgaAGTCCTGAGCCAAGTTAACGATGAACAtcctgttttaattttaagtggtATTTCTGCACAAGATATAAGATCAATTGTAGAATTTATCTACAATGGAGAAATTCGAATACCTGTGGAGAGTTTCGATACCTTTCTTAATGCTGCtcattatttgaatataaaaggTTTGGTAGAGatTGATCGTCTTGATGATCCTGAACTATCAAATGATAAAGATGAAGATAATGAAGTATCAAATGATAAAGATGAAGATAatgataaagatttaattactGAAGAAACTTACTTCCTGAGTGATTTAAGTCAAATAGAACCAGAAGAGGAATTGGACCAAATTATAGAGGCAGATagttctaataataatactagtaataataaaaaaatttcagaaaaaaaaaatgtaaattcagaAAGCGAGATAGAAATAAGGAAACGGAAACGAAGGAAGAGTGTGTGTAAACGAGAGTACACTGATGCTATGTTAGCGAATGCTATTGCTGATATAAGAGCCggaaaatctttattagaaTCAGCTGCTCAAAATAATATTCCTAGATCTACTCTGTATATGCGAGCAAAATCTTTAGGAATAACATTAAATCCTTCAAGAAGTGAATATACTCTTGAAGATATGAAAGGAGCAATTCAAGCAGTTCTTGagggTTCAAGTTTACAACAAGCTTCAGACTGTTATGGTATTCCAAAAACAGTATTATGGAGGCGAATACAAAAAGAGGGTTATCATACACCCAGACAAGATCAAAGGAAAACTTATGGTGCAGAGATAAGAGAAGCTGCTGTAAAAGCATTAGAAAGAGGAGAAACTCTTACAAAAGTTGCAAATGAGTACAAAATACCAAAAACAACTTTATTTCGAGACAAAGCACGTTTAGTAGACCAAGGAAAATTACCTTCTTCATTTTGGAAAAAACGCAAAACTGATGGAGAAGATTTAAAACGGTCGCGTCTTGAAGAAGCAGTAGCTGCCTGTAAAAATGGCAAAATGTCTCAAGCTACAGCATCTGTTACTTATCAAATACCAAAAACTACTATTTGGAGGAGATTGCAGAAAGAATCGCCTAAAAAAGATACTTCGCCAAGAAAAAATCGATCAAAAAGTGAATCAAGCGCTGATTTAAATAACTCTGAGTCTCTGAAAAATGAGGAATTAAACGAAGGTGATTTCGAAGCATATTGTCCGGACGAAGGTGAAATGAGTATAACGTACATTGAGGAAAGTAACTTATCCGACAGTCCAGTTATCATTCTTGCAAGTGGTGACTCTGATGACATAAGTTTACAAAACAGGTCATTAGTCGTTGTTCAAGAGGGATCTgatgaaatgaaaaactttatatctTGTGGCTTAGATTTAGATGAAAACTCGATCATGGTTGAAACTAGTTAA
- Protein Sequence
- MSKTLDSQMHVDSSYCFKWSHYHNYLSEVVRQLLEERCMVDVTLVADGERIQAHRVILGACSILFQEVLSQVNDEHPVLILSGISAQDIRSIVEFIYNGEIRIPVESFDTFLNAAHYLNIKGLVEIDRLDDPELSNDKDEDNEVSNDKDEDNDKDLITEETYFLSDLSQIEPEEELDQIIEADSSNNNTSNNKKISEKKNVNSESEIEIRKRKRRKSVCKREYTDAMLANAIADIRAGKSLLESAAQNNIPRSTLYMRAKSLGITLNPSRSEYTLEDMKGAIQAVLEGSSLQQASDCYGIPKTVLWRRIQKEGYHTPRQDQRKTYGAEIREAAVKALERGETLTKVANEYKIPKTTLFRDKARLVDQGKLPSSFWKKRKTDGEDLKRSRLEEAVAACKNGKMSQATASVTYQIPKTTIWRRLQKESPKKDTSPRKNRSKSESSADLNNSESLKNEELNEGDFEAYCPDEGEMSITYIEESNLSDSPVIILASGDSDDISLQNRSLVVVQEGSDEMKNFISCGLDLDENSIMVETS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01110853;
- 90% Identity
- iTF_01110023;
- 80% Identity
- iTF_01112814;