Olab001112.2
Basic Information
- Insect
- Ormyrus labotus
- Gene Symbol
- ttk
- Assembly
- GCA_035582975.1
- Location
- JAWWEO010000001.1:14262533-14265003[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4.1e-05 0.066 13.6 0.0 4 43 227 266 224 268 0.84 2 4 9.5e-13 1.5e-09 38.0 0.0 3 42 276 315 274 318 0.85 3 4 0.0018 3 8.3 0.0 7 34 332 358 330 364 0.82 4 4 4.5e-13 7.4e-10 39.1 0.1 4 39 389 424 386 429 0.91
Sequence Information
- Coding Sequence
- ATGTCCAAGACGCTGGATTCGCAGATGCATGTCGACTCCTCGTACTGCTTCAAGTGGAGCCATTATCACAATTACCTATCGGAGGTGGTGCGCCAACTATTGGAAGAAAGATGTATGGTCGACGTTACTCTTGTTGCCGATGGCGAGCGTATTCAGGCGCACCGGGTCATTCTTGGCGCCTGCAGCATTCTATTTCAGgaAGTCCTGAGCCAAGTTAACGATGAACAtcctgttttaattttaagtggtATTTCTGCACAAGATATAAGATCAATTGTAGAATTTATCTACAATGGAGAAATTCGAATACCTGTGGAGAGTTTCGATACCTTTCTTAATGCTGCtcattatttgaatataaaaggTTTGGTAGAGatTGATCGTCTTGATGATCCTGAACTATCAAATGATAAAGATGAAGATAATGAAGTATCAAATGATAAAGATGAAGATAatgataaagatttaattactGAAGAAACTTACTTCCTGAGTGATTTAAGTCAAATAGAACCAGAAGAGGAATTGGACCAAATTGTAGAGGCAGATagttctaataataatactagtaatgataaaaaaatttcagaaaaaaaaaatgtaaattcagaAAGCGAGATAGAAATAAGGAAACGGAAACGAAGGAAGAGTGTGTGTAAACGAGAGTACACTGATGCTATGTTAGCGAATGCTATTGCTGATATAAGAGCCggaaaatctttattagaaTCAGCTGCTCAAAATAATATTCCTAGATCTACTCTGTATATGCGAGCAAAATCTTTAGGAATAACATTAAATCCTTCAAGAAGTGAATATACTCTTGAAGATATGAAAGGAGCAATTCAAGCAGTTCTTGagggTTCAAGTTTACAACAAGCTTCAGACTGTTATGGTATTCCAAAAACAGTATTATGGAGGCGAATACAAAAAGAGGGTTATCATACACCCAGACAAGATCAAAGGAAAACTTATGGTGCAGAGATAAGAGAAGCTGCTGTAAAAGCATTAGAAAGAGGAGAAACTCTTACAAAAGTTGCAAATGAGTACAAAATACCAAAAACAACTTTATTTCGAGACAAAGCACGTTTAGTAGATCAAGGAAAATTACCTTCTTCATTTTGGAAAAAACGCAAAACTGATGGAGAAGATTTAAAACGGTCGCGTCTTGAAGAAGCAGTAGCTGCCTGTAAAAATGGCAAAATGTCTCAAGCTACAGCATCTGTTACTTATCAAATACCAAAAACTACTATTTGGAGGAGATTGCAGAAAGAATCGCCTAAAAAAGATACTTCGCCAAGAAAAAATCGATCAAAAAGTGAATCAAGCGCTGATTTAAATAACTCTGAGTCTCTGAAAAATGAGGAATTAAACGAAGGTGATTTCGAAGCATATTGTCCGGACGAAGGTGAAATGAGTATAACGTACATTGAGGAAAGTAACTTATCCGACAGTCCAGTTATCATTCTTGCAAGTGGTGACTCTGATGATATAAGTTTACAAAACAGGTCATTAGTCGTTGTTCAAGAGGGATCTgatgaaatgaaaaactttatatctTGTGGCTTAGATTTAGATGAAAACTCGATCATGGTTGAAACTAGTTAA
- Protein Sequence
- MSKTLDSQMHVDSSYCFKWSHYHNYLSEVVRQLLEERCMVDVTLVADGERIQAHRVILGACSILFQEVLSQVNDEHPVLILSGISAQDIRSIVEFIYNGEIRIPVESFDTFLNAAHYLNIKGLVEIDRLDDPELSNDKDEDNEVSNDKDEDNDKDLITEETYFLSDLSQIEPEEELDQIVEADSSNNNTSNDKKISEKKNVNSESEIEIRKRKRRKSVCKREYTDAMLANAIADIRAGKSLLESAAQNNIPRSTLYMRAKSLGITLNPSRSEYTLEDMKGAIQAVLEGSSLQQASDCYGIPKTVLWRRIQKEGYHTPRQDQRKTYGAEIREAAVKALERGETLTKVANEYKIPKTTLFRDKARLVDQGKLPSSFWKKRKTDGEDLKRSRLEEAVAACKNGKMSQATASVTYQIPKTTIWRRLQKESPKKDTSPRKNRSKSESSADLNNSESLKNEELNEGDFEAYCPDEGEMSITYIEESNLSDSPVIILASGDSDDISLQNRSLVVVQEGSDEMKNFISCGLDLDENSIMVETS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01110853;
- 90% Identity
- iTF_01112494; iTF_01112814; iTF_01110319;
- 80% Identity
- iTF_01110319;