Olab010546.1
Basic Information
- Insect
- Ormyrus labotus
- Gene Symbol
- -
- Assembly
- GCA_035582975.1
- Location
- JAWWEO010000045.1:21559489-21562589[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.1e-09 6.7e-06 26.4 0.2 5 37 1 32 1 36 0.93 2 2 0.00061 0.99 9.9 0.1 4 30 258 283 256 293 0.86
Sequence Information
- Coding Sequence
- ATGAAGGCTGCCTTGACCGCCTTGAATCAGGGGATGTCGTTCAGAAAGGTTGCGAAGTACTACGGTATCACCAAGTCGACGCTGCAGCGCATCAAAGCCCAGCAACGAGCGAATGCCGGAGGAGGATTTATCGCCACTGTTCAAGTCGAGATTGATcaGCATGTAAAGAACAGGGTATATGTCATTATACTCGAGGAGGAAAGCGTCATTATTAAGCAAGAACCTGGTAAAAGTGATGAAAATGTTAAGATTAAACAAAGGTTAAAGCGCAAATTAGAAGAAGacagcttaaaaataaaagaatcctCAGACACCGAGGAGGGACACATCATTTTCATCAAACAGGAGGACGTCTCTTACGAGGACGAAGACGAATATGATCTTGACTTTGTCGACGTGGAAGACGTAAACCTCGAAGCAGAAGATGAAGAAACTTTAAGAAATTCAAACGAAATAGAAGGCGACGCAGATCTGATAGATGTTGAAGACGACTTAGAATTAGGAGAATTAAGAGcaacaaataagaaaaaaccCACCCCCAAGCAAGCCTCCAGAACAAAAGAAGAAGTTAGAATAGCCGAAGGGACGCCGGAAAAGATCGCCTACAAAGTGGTGACGCCCACGACTCGCTTGAACCTCGACACCTTCGAGGGTTGGTGCATGCGGAACGTCGGCGGTGTCAAGAAAGCGGTGCAATACAATACGCCAAGGAGGCCGAGGAGCAGAGCTTTCGCTGGTCAGAAGCCCGATTTGATATATCGCATGACGGCGAACCTGCGGATGGCTCTGGAGGCCGTCGACAAGGGCATGGCCTACGACGACGCGTCGAGGGCTTACGGGATATCCGAGGCCAGGCTGCGCAGTATTAAGGAGCTCGAGGCCGCGAATCCTGCTTACATTCTGCACCCTGCCATTCGGCTCGTGGCCACGGGGAAGAAGTACTGCTGCTTGTCCTGCGGCAGAGGCTACAAGGTGCAGCGCTCGCTGAGGAGGCATCTGAGGGTCGAGTGCGGCAAGGACCCCAAGCACAAGTGTCCCTACTGCGACCACTGGACGAAGTATCGGGCGAGCATACTAAAGCACGTGGCGCACATCCACCCCAACTTGCCGTTCGAAGGGGCTGGAATTCAGGCACTCGATGCCCGGCTGGAGTGA
- Protein Sequence
- MKAALTALNQGMSFRKVAKYYGITKSTLQRIKAQQRANAGGGFIATVQVEIDQHVKNRVYVIILEEESVIIKQEPGKSDENVKIKQRLKRKLEEDSLKIKESSDTEEGHIIFIKQEDVSYEDEDEYDLDFVDVEDVNLEAEDEETLRNSNEIEGDADLIDVEDDLELGELRATNKKKPTPKQASRTKEEVRIAEGTPEKIAYKVVTPTTRLNLDTFEGWCMRNVGGVKKAVQYNTPRRPRSRAFAGQKPDLIYRMTANLRMALEAVDKGMAYDDASRAYGISEARLRSIKELEAANPAYILHPAIRLVATGKKYCCLSCGRGYKVQRSLRRHLRVECGKDPKHKCPYCDHWTKYRASILKHVAHIHPNLPFEGAGIQALDARLE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01112497; iTF_01110856;
- 90% Identity
- iTF_01112497;
- 80% Identity
- -