Oros010922.1
Basic Information
- Insect
- Ormyrus rosae
- Gene Symbol
- -
- Assembly
- GCA_035047165.1
- Location
- JAWWML010000062.1:21970014-21973382[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.2e-10 1.2e-06 28.9 0.1 3 37 41 74 41 78 0.94 2 2 0.00095 1.2 9.7 0.1 4 30 294 319 292 329 0.86
Sequence Information
- Coding Sequence
- ATGCACCACGACAAACCACATGATAGCGTACAGACCTTCACTAACAAGCATTTAAATTGGTCCGTATCGGACGATAAGCCTCAGTCGCGTCGAGGAAGACGCAGGAAACCAGTGCCTTTGGAGACTATGAAGGCCGCCTTGACCGCCTTGAATCAGGGGATGTCGTTCAGAAAGGTTGCGAAGTACTACGGCATCACCAAGTCGACGCTGCAGCGCATCAAAGCCCAGCAACGAGCGAATGCCGGAGGAGGATTTATCGCCACTGTTCAAGCATGTAAAGAACAGGATGTCATTATACTCGAGGAGGAAAGCGTCATTATTAAGCAAGAACCTGGTAAAAGTGATGAAAATGTTAAGATTAAACAAAGATTAAAGCGCAAATTAGAAGAAGacagcttaaaaataaaagaatcctCAGACACCGAGGAGGGACACATCATTTTCATCAAACAGGAGGACGTCTCTTACGAGGACGAAGACGAATATGATCTTGACTTTGTCGACGTGGAAGACGTAAACCTCGAAGCAGAAGATGAAGAAACTTTAAGAAATTCAAACGAAATAGAAGGCGATGCAGATCTGATAGATGTTGAAGACGACTTAGAATTAGGAGAATTAAGAGcaacaaataagaaaaaaccCACCCCCAAGCAAGCCTCCAGAACAAAAGAAGAAGTTAGAATAGCCGAAGGGACGCCGGAAAAGATCGCCTACAAAGTGGTGACGCCCACGACTCGCTTGAACCTCGACACCTTCGAGGGTTGGTGCATGCGGAACGTCGGCGGTGTCAAGAAAGCGGTGCAATACAATACGCCAAGGAGGCCGAGGAGCAGAGCTTTCGCTGGTCAGAAGCCCGATTTGATATATCGCATGACGGCGAACCTGCGGATGGCTCTGGAGGCCGTCGATAAGGGCATGGCTTACGACGACGCGTCGAGGGCTTACGGGATATCCGAGGCCAGGCTGCGCAGTATTAAGGAGCTCGAGGCCGCGAATCCTGCTTACATTCTGCACCCTGCCATTCGGTTCGTGGCCACGGGGAAGAAGTACTGCTGCTTGTCCTGCGGCAGAGGCTACAAGGTGCAGCGCTCGCTGAGGAGGCATCTGAGGGTCGAGTGCGGCAAGGACCCCAAGCACAAGTGTCCCTACTGCGACCACTGGACGAAGTATCGGGCGAGCATACTAAAGCACGTGGCGCACATCCACCCCAACTTGCCGTTCGAAGGGGCTGGAATTCAGGCACTCGATGCCCGGCTGGAGTGA
- Protein Sequence
- MHHDKPHDSVQTFTNKHLNWSVSDDKPQSRRGRRRKPVPLETMKAALTALNQGMSFRKVAKYYGITKSTLQRIKAQQRANAGGGFIATVQACKEQDVIILEEESVIIKQEPGKSDENVKIKQRLKRKLEEDSLKIKESSDTEEGHIIFIKQEDVSYEDEDEYDLDFVDVEDVNLEAEDEETLRNSNEIEGDADLIDVEDDLELGELRATNKKKPTPKQASRTKEEVRIAEGTPEKIAYKVVTPTTRLNLDTFEGWCMRNVGGVKKAVQYNTPRRPRSRAFAGQKPDLIYRMTANLRMALEAVDKGMAYDDASRAYGISEARLRSIKELEAANPAYILHPAIRFVATGKKYCCLSCGRGYKVQRSLRRHLRVECGKDPKHKCPYCDHWTKYRASILKHVAHIHPNLPFEGAGIQALDARLE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01110026;
- 90% Identity
- iTF_01110026;
- 80% Identity
- -