Olae014038.1
Basic Information
- Insect
- Orius laevigatus
- Gene Symbol
- -
- Assembly
- GCA_018703685.1
- Location
- JAGWEN010000099.1:218945-224272[+]
Transcription Factor Domain
- TF Family
- zf-GAGA
- Domain
- zf-GAGA domain
- PFAM
- PF09237
- TF Group
- Zinc-Coordinating Group
- Description
- Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 39 1.9 7.6e+02 0.3 0.0 21 47 6 32 4 38 0.84 2 39 0.014 5.6 7.2 0.0 21 46 34 59 26 67 0.84 3 39 5.2 2e+03 -1.0 0.1 21 43 62 84 58 89 0.80 4 39 0.028 11 6.2 0.1 20 45 89 114 71 120 0.83 5 39 0.33 1.3e+02 2.8 0.0 26 44 124 142 114 146 0.83 6 39 0.036 14 5.9 0.1 21 46 147 172 142 181 0.85 7 39 5.2 2.1e+03 -1.0 0.1 21 43 175 197 171 202 0.80 8 39 0.0021 0.81 9.9 0.0 20 45 202 227 185 233 0.83 9 39 0.31 1.2e+02 2.9 0.0 26 44 237 255 227 259 0.84 10 39 0.0022 0.88 9.8 0.0 21 46 260 285 249 292 0.82 11 39 0.83 3.3e+02 1.5 0.0 18 44 311 337 299 344 0.85 12 39 0.31 1.2e+02 2.9 0.2 26 44 348 366 338 370 0.86 13 39 0.018 7.3 6.8 0.0 21 46 371 396 363 402 0.84 14 39 0.54 2.1e+02 2.1 0.0 21 44 399 422 395 429 0.87 15 39 0.2 80 3.5 0.0 26 46 433 453 423 459 0.83 16 39 0.012 4.7 7.4 0.0 21 46 456 481 445 488 0.82 17 39 0.32 1.3e+02 2.9 0.0 21 46 484 509 480 515 0.84 18 39 0.062 24 5.1 0.0 21 45 512 536 508 542 0.90 19 39 0.14 55 4.0 0.1 26 48 546 568 536 572 0.81 20 39 0.0076 3 8.0 0.0 21 46 569 594 565 600 0.87 21 39 0.49 1.9e+02 2.3 0.0 21 44 597 620 593 624 0.87 22 39 0.21 82 3.5 0.0 26 47 631 652 625 658 0.83 23 39 0.97 3.8e+02 1.3 0.0 21 45 654 678 646 685 0.83 24 39 0.23 91 3.3 0.0 21 46 682 707 671 713 0.82 25 39 0.045 18 5.6 0.0 21 45 710 734 702 743 0.89 26 39 0.15 57 4.0 0.2 26 47 744 765 733 771 0.81 27 39 0.52 2.1e+02 2.2 0.0 19 43 791 815 787 821 0.86 28 39 0.2 77 3.5 0.0 26 46 827 847 816 853 0.82 29 39 0.055 22 5.3 0.0 21 46 850 875 838 882 0.80 30 39 0.27 1.1e+02 3.1 0.0 21 46 878 903 874 910 0.83 31 39 0.33 1.3e+02 2.8 0.0 21 44 906 929 901 936 0.87 32 39 0.0085 3.3 7.9 0.0 11 45 953 987 948 995 0.85 33 39 0.78 3.1e+02 1.6 0.0 16 43 985 1013 980 1023 0.72 34 39 0.0035 1.4 9.1 0.1 17 43 1032 1058 1011 1064 0.80 35 39 0.089 35 4.6 0.0 21 45 1064 1088 1059 1095 0.85 36 39 0.35 1.4e+02 2.7 0.0 21 44 1092 1115 1088 1123 0.84 37 39 1.7 6.8e+02 0.5 0.0 20 43 1119 1142 1112 1146 0.80 38 39 0.077 30 4.8 0.2 21 45 1148 1172 1142 1179 0.86 39 39 0.22 85 3.4 0.0 21 43 1176 1198 1172 1203 0.89
Sequence Information
- Coding Sequence
- ATGAGAATCCATAAAGGAGAGAAGCCATACAAATGTGATTTCTGCAATTCTGCATTCACCCAGGCTGTCAGTTTGAAAGTACACAAAAGAATCCACTCAGGAGAGAAGCCCTTCAAATGTGATATCTGCGATGCTGCATTCAATGGGATAGGCGCTTTGAGAAGACATATAAGAACCCATACAGGAGAGAAGCCTTATGGGTGTGAAGTTTGTAATGCCAAGTTTTCTGATCCGAGTGCTCTAAAATCGCATAAAAGAATTCACACAGGAGAGAAGCCATACAAATGCGAAATCTGCGATGCGTCTTTTACCGTATCAAGCACTTTAAGAGGACATATGAGAACCCATACGGGAGAAAAGAAGTCATACAGATGTGATATCTGCGATGCTGTATTCACCCAGGCTGGCAGTTTGAAAATACACAAGAGAATCCACTCAGGAGAGAAGCCCTTCAAATGCGATGTTTGCAATGCCGCATTCATCGAGATAGGCGCTTTGAGAAGACATATAAGAACCCATACAGGAGAGAAGCCTTATGGGTGTGAAGTTTGTAATGCCAAGTTTTCTGATCCGAGTGCTCTAAAATCGCATAAAAGAATTCACACAGGAGAGAAGCCATACAAATGCGAAATCTGCGATGCGTCTTTTGCCGTATCAAGAACTTTGAGAGGACATATGAGAACCCATACGGGAGAAAAGAGGTCATACAGATGTGATATCTGCGATGCTGTATTCACTCAGGCTGGCAGTTTGAAAGTACACAAAAGAATCCACTCAGGAGAGAAGCCCTTCAAATGTGATATCTGCAATGCTGCATTCAATGAGAAAGGTACTTTGAGAAGACATATAAGAACCCATACAGGAGAGAAGCCTTATGGATTTGAAGTTTGTGAAGCCAAGTTTTCTGATTCGAGTGCTCTAACATTGCATAAAAGCACAGGAGAGAAGCCATACAAATGCGAAATCTGCGATGACTCTTTTGCCGAATTGAGTACTTTGAGAGGACATATGAGAACCCATATGGGAGAAAAGAGGTCATACAGATGTGATATCTGCGATGCTGTATTCACTCAGGCTTGCAGTTTGAAAGTACACAAAAGAATCCACTCAGGAGAGCAGACCTTCAAATGTGATATCTGCAAAGCTGCATTCAATGGGAAAGGTACTTTGAGAAGACATATAAGAACCCATACAGGAGAGAAGCCATACAAATGCGAAATCTGCGGTGCCTCTTTTGCCGAATTGAGTACTTTGAGAGGACATATGAGAACCCACATGGGAGAAAAGAGGTCTTACAGATGTGATATCTGCGATGCTGTATTCACCCAGGCTGGCAGTTTGAAAGTACACAAAAGAATCCACTCAGGAGAGAAGCCCTTCAAATGTGATATCTGCGATGCTGCATTCAATGGGATAGGCGCTTTGAGAAGACATATAAGAACCCATACAGGAGAGAAGCCTTATGGGTGTGAAGTTTGTAATGCCAAGTTTTCTGATTCGAGTGCTCTAAAATCACATAAAAGAATTCACACAGGAGAGAAGCCATACAAATGCGAAATCTGCGATGCGTCTTTTGCTGTATCAAGCACTTTGAGAGGACATATGAGAACCCATACGGGAGAAAAGAGGTCATACAGATGTGATATCTGCGATGCTGTATTCACTCAGGCTTGCAGTTTGAAAGTACACAAAAGAATCCACAAAGGAGAGAAGCCCTTCAAATGTGATATCTGCAATGCTGCATTCAATGGGAAAGGTACTTTGAGAAGACATATAAGAACCCATACAGGAGAGAAGCCATACAAATGCGAAATTTGCGATGCCTCTTTTGCTGAATTGAGTACTTTGAGAGGACATATGAGAACCCACATAGGAGAAAAGAGGTCTTACAGATGTGATATCTGCGATGCTGTATTCACCCAGGCTGGCAGTTTGAAAGTTCACAAAAGAATCCACTCGGGAGAGAAGCCCTTCAAATGTGATACCTGCGATGCTGCATTCAATGGGATAGGCGCTTTGAAAAGACATATAAGAACCCATACGGGAGAGAAGCCCTATGGGTGTGAAGTTTGTAATGCCAAGTTTTCTGATTCGAGTGCTCTAAAATCGCATAAAAGAATTCACACAGGAGAGAAGCCATACAAATGCAAAATTTGCGATGCGTCTTTTGCCGTGTCAAGCACTTTGAGAGGACATATGAGAACACATACGGGAGAAAAGAGGTCATACAGATGTAATATCTGCGATGCTGTATTCACTCAGGCTTGCAGTTTGAAAGTACACAAAAGAATCCACTCAGGAGAGAAGCCTTATGGATTTGAAGTTTGTGAAGCCAAGTTTTCTGATTCGAGTGCTCTAACATTGCATATAAGCACAGGAGAGAAGCCATACAAATGCGAAATCTGCGATGCCTCTTTTGCCGAATTGAGTACTTTGAGAGGACATAAGAGAACCCACATGGGAGAAAAGAGGTCTTACAGATGTGATATCTGCGATGCTGTATTCACCCAGGCTGGCAGTTTGAAAGTACACAAAAGAATCCACTCAGGAGAGAAGCCCTTCAAATGTGATATCTGCGATGCTGCATTCAATGGGATAGGCGCTTTGAAAAGACATATAAGAACCCATACAGGAGAGAAGCCTTATGGGTGTGAGATTTGTAATGCAAAGTTTTCGGATTCGAGTGCTCTATCATCGCATAAAAGAATTCACACAGGAGAGAAACCTTACAAATGTGACATCTGTGATGCCTCGTTTGCCAAACCAAGCAATCTGACTGCTCATAAGAGAATCCACACGGGCGAAAAGAGGTCATACAGATGTAATATATGTAATTCAGATTTTGACCAGTCTGGAGGTTTGGAAGCACATAAGAGCATCCATGAAGGAAACAAGCCATATAAATGTAATATCTGCGATGCCGCATTCACCCAGTCTGGCACTTTGACATCACACATGAGAAGCCACTCAGGAGAGAAGCCCTATAAATGTGATGTATGTGATGCCACATTCGTCGCACCTGGCAGTTTGACAAAACACAAGAGAGCTCATACAGGAGAAAAGCCTTTTGGATGTGAAATTTACGATTTGAATGTCCATACCCAGACAGATAGGCCCTACAGTTGTGACATCTGCGGTGCATCATTCGCCACGTCCAACAATATAGTCAGACATAAAAGAAAGCATACTGGAGAGAGGCCATACGGATGTGAACTTTGCCACGCTAGGTTTTCCGATTCATCCAAATTGAAGATCCATCTAAGAAGCCATACTGGAGAGAAGCCGTACAAATGTGATGTTTGCGATTTTGCGTTTGCCCAGTCAAGCCATTTGACAAAACATAAGAGAACTCATACAGGAGAGAAGCCCTATGGGTGTCAAATCTGTGGTTCCACATTCACCACTTCAACCTCTTTGACGATTCATTTTCGAACTCATACAGGAGAGAAGCCATACGAATGTGAGATTTGTAACGCTAGGTTCTCCCATTCGTGCAAATTAAAGAACCATATAAGAACCCACACAGGGGAGAAACCATACAAATGTGATGTTTGTGGTTTCGCATTCACTTCATCAAACAATTTGCTAAGACATAAGCGGACCCACAGAGGAAATAAGCTATACAATTGTGATATATGCGGCGTCCCGTTTAACGAACCAGCAACTTTGTCAAGGCATATTAAAACCCACACAGATACACCTGTTCTGGCAAGTTCATACAGTCAATTTACACCTGTGCTGGAAAGTTCTTGCAGTGAAGATACACCTGTGCTAGAAAATTCTTGCAGCGAAGATACACCTGTGCTGGTAAGTTCTTGCAGTCAAGATACTCCTGTGCTGGCAAGTTCTTACAGTCAAACGAATTGA
- Protein Sequence
- MRIHKGEKPYKCDFCNSAFTQAVSLKVHKRIHSGEKPFKCDICDAAFNGIGALRRHIRTHTGEKPYGCEVCNAKFSDPSALKSHKRIHTGEKPYKCEICDASFTVSSTLRGHMRTHTGEKKSYRCDICDAVFTQAGSLKIHKRIHSGEKPFKCDVCNAAFIEIGALRRHIRTHTGEKPYGCEVCNAKFSDPSALKSHKRIHTGEKPYKCEICDASFAVSRTLRGHMRTHTGEKRSYRCDICDAVFTQAGSLKVHKRIHSGEKPFKCDICNAAFNEKGTLRRHIRTHTGEKPYGFEVCEAKFSDSSALTLHKSTGEKPYKCEICDDSFAELSTLRGHMRTHMGEKRSYRCDICDAVFTQACSLKVHKRIHSGEQTFKCDICKAAFNGKGTLRRHIRTHTGEKPYKCEICGASFAELSTLRGHMRTHMGEKRSYRCDICDAVFTQAGSLKVHKRIHSGEKPFKCDICDAAFNGIGALRRHIRTHTGEKPYGCEVCNAKFSDSSALKSHKRIHTGEKPYKCEICDASFAVSSTLRGHMRTHTGEKRSYRCDICDAVFTQACSLKVHKRIHKGEKPFKCDICNAAFNGKGTLRRHIRTHTGEKPYKCEICDASFAELSTLRGHMRTHIGEKRSYRCDICDAVFTQAGSLKVHKRIHSGEKPFKCDTCDAAFNGIGALKRHIRTHTGEKPYGCEVCNAKFSDSSALKSHKRIHTGEKPYKCKICDASFAVSSTLRGHMRTHTGEKRSYRCNICDAVFTQACSLKVHKRIHSGEKPYGFEVCEAKFSDSSALTLHISTGEKPYKCEICDASFAELSTLRGHKRTHMGEKRSYRCDICDAVFTQAGSLKVHKRIHSGEKPFKCDICDAAFNGIGALKRHIRTHTGEKPYGCEICNAKFSDSSALSSHKRIHTGEKPYKCDICDASFAKPSNLTAHKRIHTGEKRSYRCNICNSDFDQSGGLEAHKSIHEGNKPYKCNICDAAFTQSGTLTSHMRSHSGEKPYKCDVCDATFVAPGSLTKHKRAHTGEKPFGCEIYDLNVHTQTDRPYSCDICGASFATSNNIVRHKRKHTGERPYGCELCHARFSDSSKLKIHLRSHTGEKPYKCDVCDFAFAQSSHLTKHKRTHTGEKPYGCQICGSTFTTSTSLTIHFRTHTGEKPYECEICNARFSHSCKLKNHIRTHTGEKPYKCDVCGFAFTSSNNLLRHKRTHRGNKLYNCDICGVPFNEPATLSRHIKTHTDTPVLASSYSQFTPVLESSCSEDTPVLENSCSEDTPVLVSSCSQDTPVLASSYSQTN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01108656;
- 90% Identity
- iTF_01108656;
- 80% Identity
- iTF_01108656;