Olae014038.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Orius laevigatus
Gene Symbol
-
Assembly
GCA_018703685.1
Location
JAGWEN010000099.1:218945-224272[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 43 9.2e-05 0.0056 17.1 0.7 1 23 10 32 10 32 0.99
2 43 1.6e-05 0.00098 19.5 0.0 1 23 38 60 38 60 0.99
3 43 6.3e-05 0.0038 17.6 0.2 3 23 68 88 66 88 0.97
4 43 4.2e-07 2.5e-05 24.5 0.4 1 23 94 116 94 116 0.99
5 43 3e-06 0.00018 21.8 0.1 1 23 123 145 123 145 0.99
6 43 5.6e-05 0.0034 17.8 0.1 1 23 151 173 151 173 0.99
7 43 6.3e-05 0.0038 17.6 0.2 3 23 181 201 179 201 0.97
8 43 4.3e-06 0.00026 21.3 0.2 1 23 207 229 207 229 0.99
9 43 2.6e-06 0.00016 22.0 0.1 1 23 236 258 236 258 0.99
10 43 1.5e-06 9.3e-05 22.7 0.5 1 23 264 286 264 286 0.99
11 43 0.39 24 5.7 0.0 5 21 296 312 295 313 0.89
12 43 3.5e-05 0.0021 18.4 0.2 1 23 318 340 318 340 0.99
13 43 1.1e-05 0.00065 20.0 1.0 1 23 347 369 347 369 0.99
14 43 3e-06 0.00018 21.8 0.5 1 23 375 397 375 397 0.99
15 43 1.5e-06 9.1e-05 22.7 0.1 1 23 403 425 403 425 0.99
16 43 2.6e-06 0.00016 22.0 0.1 1 23 432 454 432 454 0.99
17 43 1.6e-05 0.00098 19.5 0.0 1 23 460 482 460 482 0.99
18 43 7e-05 0.0042 17.5 0.3 3 23 490 510 488 510 0.97
19 43 1e-06 6.2e-05 23.2 0.2 1 23 516 538 516 538 0.99
20 43 1.1e-05 0.00065 20.0 1.0 1 23 545 567 545 567 0.99
21 43 1.8e-06 0.00011 22.5 0.4 1 23 573 595 573 595 0.99
22 43 3.1e-06 0.00019 21.7 0.2 1 23 601 623 601 623 0.99
23 43 2.6e-06 0.00016 22.0 0.1 1 23 630 652 630 652 0.99
24 43 3.7e-05 0.0023 18.3 0.1 1 23 658 680 658 680 0.99
25 43 7e-05 0.0042 17.5 0.3 3 23 688 708 686 708 0.97
26 43 7.4e-07 4.5e-05 23.7 0.4 1 23 714 736 714 736 0.99
27 43 8.8e-06 0.00054 20.3 1.3 1 23 743 765 743 765 0.99
28 43 0.12 7.2 7.3 0.0 5 22 775 792 774 792 0.91
29 43 3.4e-05 0.002 18.5 0.3 1 23 797 819 797 819 0.99
30 43 2.6e-06 0.00016 22.0 0.1 1 23 826 848 826 848 0.99
31 43 1.5e-05 0.00089 19.6 0.1 1 23 854 876 854 876 0.99
32 43 0.00013 0.0079 16.6 0.2 3 23 884 904 882 904 0.97
33 43 3.9e-07 2.4e-05 24.6 0.1 1 23 910 932 910 932 0.99
34 43 0.0015 0.088 13.3 0.1 1 23 939 961 939 961 0.98
35 43 2.1e-07 1.3e-05 25.4 0.4 1 23 967 989 967 989 0.99
36 43 8.2e-05 0.005 17.3 0.1 1 23 995 1017 995 1017 0.98
37 43 1.9e-05 0.0011 19.3 0.3 1 23 1040 1062 1040 1062 0.98
38 43 0.0001 0.0062 17.0 1.6 3 23 1070 1090 1068 1090 0.97
39 43 8.3e-07 5e-05 23.5 3.1 1 23 1096 1118 1096 1118 0.99
40 43 5.7e-05 0.0034 17.8 0.9 3 23 1126 1146 1124 1146 0.98
41 43 2.9e-05 0.0018 18.7 4.9 1 23 1152 1174 1152 1174 0.99
42 43 4.6e-07 2.8e-05 24.3 1.3 1 23 1180 1202 1180 1202 0.99
43 43 1.8e-05 0.0011 19.4 0.0 1 23 1208 1230 1208 1230 0.98

Sequence Information

Coding Sequence
ATGAGAATCCATAAAGGAGAGAAGCCATACAAATGTGATTTCTGCAATTCTGCATTCACCCAGGCTGTCAGTTTGAAAGTACACAAAAGAATCCACTCAGGAGAGAAGCCCTTCAAATGTGATATCTGCGATGCTGCATTCAATGGGATAGGCGCTTTGAGAAGACATATAAGAACCCATACAGGAGAGAAGCCTTATGGGTGTGAAGTTTGTAATGCCAAGTTTTCTGATCCGAGTGCTCTAAAATCGCATAAAAGAATTCACACAGGAGAGAAGCCATACAAATGCGAAATCTGCGATGCGTCTTTTACCGTATCAAGCACTTTAAGAGGACATATGAGAACCCATACGGGAGAAAAGAAGTCATACAGATGTGATATCTGCGATGCTGTATTCACCCAGGCTGGCAGTTTGAAAATACACAAGAGAATCCACTCAGGAGAGAAGCCCTTCAAATGCGATGTTTGCAATGCCGCATTCATCGAGATAGGCGCTTTGAGAAGACATATAAGAACCCATACAGGAGAGAAGCCTTATGGGTGTGAAGTTTGTAATGCCAAGTTTTCTGATCCGAGTGCTCTAAAATCGCATAAAAGAATTCACACAGGAGAGAAGCCATACAAATGCGAAATCTGCGATGCGTCTTTTGCCGTATCAAGAACTTTGAGAGGACATATGAGAACCCATACGGGAGAAAAGAGGTCATACAGATGTGATATCTGCGATGCTGTATTCACTCAGGCTGGCAGTTTGAAAGTACACAAAAGAATCCACTCAGGAGAGAAGCCCTTCAAATGTGATATCTGCAATGCTGCATTCAATGAGAAAGGTACTTTGAGAAGACATATAAGAACCCATACAGGAGAGAAGCCTTATGGATTTGAAGTTTGTGAAGCCAAGTTTTCTGATTCGAGTGCTCTAACATTGCATAAAAGCACAGGAGAGAAGCCATACAAATGCGAAATCTGCGATGACTCTTTTGCCGAATTGAGTACTTTGAGAGGACATATGAGAACCCATATGGGAGAAAAGAGGTCATACAGATGTGATATCTGCGATGCTGTATTCACTCAGGCTTGCAGTTTGAAAGTACACAAAAGAATCCACTCAGGAGAGCAGACCTTCAAATGTGATATCTGCAAAGCTGCATTCAATGGGAAAGGTACTTTGAGAAGACATATAAGAACCCATACAGGAGAGAAGCCATACAAATGCGAAATCTGCGGTGCCTCTTTTGCCGAATTGAGTACTTTGAGAGGACATATGAGAACCCACATGGGAGAAAAGAGGTCTTACAGATGTGATATCTGCGATGCTGTATTCACCCAGGCTGGCAGTTTGAAAGTACACAAAAGAATCCACTCAGGAGAGAAGCCCTTCAAATGTGATATCTGCGATGCTGCATTCAATGGGATAGGCGCTTTGAGAAGACATATAAGAACCCATACAGGAGAGAAGCCTTATGGGTGTGAAGTTTGTAATGCCAAGTTTTCTGATTCGAGTGCTCTAAAATCACATAAAAGAATTCACACAGGAGAGAAGCCATACAAATGCGAAATCTGCGATGCGTCTTTTGCTGTATCAAGCACTTTGAGAGGACATATGAGAACCCATACGGGAGAAAAGAGGTCATACAGATGTGATATCTGCGATGCTGTATTCACTCAGGCTTGCAGTTTGAAAGTACACAAAAGAATCCACAAAGGAGAGAAGCCCTTCAAATGTGATATCTGCAATGCTGCATTCAATGGGAAAGGTACTTTGAGAAGACATATAAGAACCCATACAGGAGAGAAGCCATACAAATGCGAAATTTGCGATGCCTCTTTTGCTGAATTGAGTACTTTGAGAGGACATATGAGAACCCACATAGGAGAAAAGAGGTCTTACAGATGTGATATCTGCGATGCTGTATTCACCCAGGCTGGCAGTTTGAAAGTTCACAAAAGAATCCACTCGGGAGAGAAGCCCTTCAAATGTGATACCTGCGATGCTGCATTCAATGGGATAGGCGCTTTGAAAAGACATATAAGAACCCATACGGGAGAGAAGCCCTATGGGTGTGAAGTTTGTAATGCCAAGTTTTCTGATTCGAGTGCTCTAAAATCGCATAAAAGAATTCACACAGGAGAGAAGCCATACAAATGCAAAATTTGCGATGCGTCTTTTGCCGTGTCAAGCACTTTGAGAGGACATATGAGAACACATACGGGAGAAAAGAGGTCATACAGATGTAATATCTGCGATGCTGTATTCACTCAGGCTTGCAGTTTGAAAGTACACAAAAGAATCCACTCAGGAGAGAAGCCTTATGGATTTGAAGTTTGTGAAGCCAAGTTTTCTGATTCGAGTGCTCTAACATTGCATATAAGCACAGGAGAGAAGCCATACAAATGCGAAATCTGCGATGCCTCTTTTGCCGAATTGAGTACTTTGAGAGGACATAAGAGAACCCACATGGGAGAAAAGAGGTCTTACAGATGTGATATCTGCGATGCTGTATTCACCCAGGCTGGCAGTTTGAAAGTACACAAAAGAATCCACTCAGGAGAGAAGCCCTTCAAATGTGATATCTGCGATGCTGCATTCAATGGGATAGGCGCTTTGAAAAGACATATAAGAACCCATACAGGAGAGAAGCCTTATGGGTGTGAGATTTGTAATGCAAAGTTTTCGGATTCGAGTGCTCTATCATCGCATAAAAGAATTCACACAGGAGAGAAACCTTACAAATGTGACATCTGTGATGCCTCGTTTGCCAAACCAAGCAATCTGACTGCTCATAAGAGAATCCACACGGGCGAAAAGAGGTCATACAGATGTAATATATGTAATTCAGATTTTGACCAGTCTGGAGGTTTGGAAGCACATAAGAGCATCCATGAAGGAAACAAGCCATATAAATGTAATATCTGCGATGCCGCATTCACCCAGTCTGGCACTTTGACATCACACATGAGAAGCCACTCAGGAGAGAAGCCCTATAAATGTGATGTATGTGATGCCACATTCGTCGCACCTGGCAGTTTGACAAAACACAAGAGAGCTCATACAGGAGAAAAGCCTTTTGGATGTGAAATTTACGATTTGAATGTCCATACCCAGACAGATAGGCCCTACAGTTGTGACATCTGCGGTGCATCATTCGCCACGTCCAACAATATAGTCAGACATAAAAGAAAGCATACTGGAGAGAGGCCATACGGATGTGAACTTTGCCACGCTAGGTTTTCCGATTCATCCAAATTGAAGATCCATCTAAGAAGCCATACTGGAGAGAAGCCGTACAAATGTGATGTTTGCGATTTTGCGTTTGCCCAGTCAAGCCATTTGACAAAACATAAGAGAACTCATACAGGAGAGAAGCCCTATGGGTGTCAAATCTGTGGTTCCACATTCACCACTTCAACCTCTTTGACGATTCATTTTCGAACTCATACAGGAGAGAAGCCATACGAATGTGAGATTTGTAACGCTAGGTTCTCCCATTCGTGCAAATTAAAGAACCATATAAGAACCCACACAGGGGAGAAACCATACAAATGTGATGTTTGTGGTTTCGCATTCACTTCATCAAACAATTTGCTAAGACATAAGCGGACCCACAGAGGAAATAAGCTATACAATTGTGATATATGCGGCGTCCCGTTTAACGAACCAGCAACTTTGTCAAGGCATATTAAAACCCACACAGATACACCTGTTCTGGCAAGTTCATACAGTCAATTTACACCTGTGCTGGAAAGTTCTTGCAGTGAAGATACACCTGTGCTAGAAAATTCTTGCAGCGAAGATACACCTGTGCTGGTAAGTTCTTGCAGTCAAGATACTCCTGTGCTGGCAAGTTCTTACAGTCAAACGAATTGA
Protein Sequence
MRIHKGEKPYKCDFCNSAFTQAVSLKVHKRIHSGEKPFKCDICDAAFNGIGALRRHIRTHTGEKPYGCEVCNAKFSDPSALKSHKRIHTGEKPYKCEICDASFTVSSTLRGHMRTHTGEKKSYRCDICDAVFTQAGSLKIHKRIHSGEKPFKCDVCNAAFIEIGALRRHIRTHTGEKPYGCEVCNAKFSDPSALKSHKRIHTGEKPYKCEICDASFAVSRTLRGHMRTHTGEKRSYRCDICDAVFTQAGSLKVHKRIHSGEKPFKCDICNAAFNEKGTLRRHIRTHTGEKPYGFEVCEAKFSDSSALTLHKSTGEKPYKCEICDDSFAELSTLRGHMRTHMGEKRSYRCDICDAVFTQACSLKVHKRIHSGEQTFKCDICKAAFNGKGTLRRHIRTHTGEKPYKCEICGASFAELSTLRGHMRTHMGEKRSYRCDICDAVFTQAGSLKVHKRIHSGEKPFKCDICDAAFNGIGALRRHIRTHTGEKPYGCEVCNAKFSDSSALKSHKRIHTGEKPYKCEICDASFAVSSTLRGHMRTHTGEKRSYRCDICDAVFTQACSLKVHKRIHKGEKPFKCDICNAAFNGKGTLRRHIRTHTGEKPYKCEICDASFAELSTLRGHMRTHIGEKRSYRCDICDAVFTQAGSLKVHKRIHSGEKPFKCDTCDAAFNGIGALKRHIRTHTGEKPYGCEVCNAKFSDSSALKSHKRIHTGEKPYKCKICDASFAVSSTLRGHMRTHTGEKRSYRCNICDAVFTQACSLKVHKRIHSGEKPYGFEVCEAKFSDSSALTLHISTGEKPYKCEICDASFAELSTLRGHKRTHMGEKRSYRCDICDAVFTQAGSLKVHKRIHSGEKPFKCDICDAAFNGIGALKRHIRTHTGEKPYGCEICNAKFSDSSALSSHKRIHTGEKPYKCDICDASFAKPSNLTAHKRIHTGEKRSYRCNICNSDFDQSGGLEAHKSIHEGNKPYKCNICDAAFTQSGTLTSHMRSHSGEKPYKCDVCDATFVAPGSLTKHKRAHTGEKPFGCEIYDLNVHTQTDRPYSCDICGASFATSNNIVRHKRKHTGERPYGCELCHARFSDSSKLKIHLRSHTGEKPYKCDVCDFAFAQSSHLTKHKRTHTGEKPYGCQICGSTFTTSTSLTIHFRTHTGEKPYECEICNARFSHSCKLKNHIRTHTGEKPYKCDVCGFAFTSSNNLLRHKRTHRGNKLYNCDICGVPFNEPATLSRHIKTHTDTPVLASSYSQFTPVLESSCSEDTPVLENSCSEDTPVLVSSCSQDTPVLASSYSQTN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01108965;
90% Identity
iTF_01108965;
80% Identity
iTF_01108965;