Olae012502.1
Basic Information
- Insect
- Orius laevigatus
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_018703685.1
- Location
- JAGWEN010001080.1:28943-32163[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-101 2.9e-97 325.6 40.5 1 300 17 314 17 314 0.91 2 2 0.0014 25 4.0 5.0 120 172 312 364 311 373 0.93
Sequence Information
- Coding Sequence
- ATGGGTGGAGCATTGTGTTCCGAACCTATCAGGACTGAAAACGCTCAGGCGGAAGCACGGTTGGCAGCGAAACGCCAAGCGAGAGCCGAAGCGAGGGAAATCCGCATGCGAGAGTTGGAACGCCAGCAAAAGGAATCTGACGAAAATGCCGATCGGATCTACGATATGTACACAAGCACACCGGACGGTGTGACCAGATCAAGGGTACCCTCGTTAAACAATAGCAGATTGTCTGCATCAAACAGTTACCAGTCATCAAGACGAAGTTCTGAAGATTCTTTAGAAGAAACAGCATCACTTAGAGATGTCCGAGGCGAACTGCGAGAAGTTGAAGACAAATTTCGAAGGGCGATGATAGGAAATGCGCAGTTGGACAATGAAAAAGCAGCCGCTGCGTATCAAGTTGAACTTTATAAAGATAAATATGAAGAATTAGAAGAAGAGCATAATCAACTTCAACGGGAACACAAAGAAAAATGTCGACAGTTGGAACAGAGTAAAAGGGACCAGGCGAAACTTCAGAAAGATTTGGAAGCGGCATTGGCTGCTTTGCAAGAACGCGACCGACTGATAGAAGAGCAAGGTTTGGTCATCGTGGGAGGCGAAACGTCATCGAGTGCGACCGAAAGCGACGAAGATGACGGCGAAGAGAAAAAGACGAGGGAGAAACATCGAAAAGCTCTCGTCTCGTCCGATATGGCGAAACTTTTAGATTCTGTAGGACACGGCTCTTTAGATGTACGGTTGAAAAAATTAGCTGCCCAACGAAATGAGTTCCAAGATGAGCTGCGGCATGTCAAATTGGAACTTGAAGAGGAGAAGTCGAAAAATAGTCGGTTCGGCTCAAACCCTGCCGATATCGAAGAATTACAACGAGAGGCCAATAAACAATTAGGAGATTACAAATTTAAACTTCAAAAAGCCGAACAAGACGTTTCAACGCTTCAAGCGACTGTTGCCAGGCTTGAGGGTCAAGTTTTACGCTACAAAACGGCCGCCGAGACATCCGAAAAAGCCGAAGACGAACTCAAACTCGAACGACGGAAACTTCAGAGAGAGCTGCGTGAATGTCAATCTAGAGTCGAGGAGTTGGAAACTTCGAATAATCACCTTCAAAAACGCCTCGACAAACTGAAAACTGCCAAATCCGCCCTACTCAAAGATTTGTAG
- Protein Sequence
- MGGALCSEPIRTENAQAEARLAAKRQARAEAREIRMRELERQQKESDENADRIYDMYTSTPDGVTRSRVPSLNNSRLSASNSYQSSRRSSEDSLEETASLRDVRGELREVEDKFRRAMIGNAQLDNEKAAAAYQVELYKDKYEELEEEHNQLQREHKEKCRQLEQSKRDQAKLQKDLEAALAALQERDRLIEEQGLVIVGGETSSSATESDEDDGEEKKTREKHRKALVSSDMAKLLDSVGHGSLDVRLKKLAAQRNEFQDELRHVKLELEEEKSKNSRFGSNPADIEELQREANKQLGDYKFKLQKAEQDVSTLQATVARLEGQVLRYKTAAETSEKAEDELKLERRKLQRELRECQSRVEELETSNNHLQKRLDKLKTAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00386350;
- 90% Identity
- iTF_00339877;
- 80% Identity
- -