Clec004701.1
Basic Information
- Insect
- Cimex lectularius
- Gene Symbol
- lrrfip2
- Assembly
- GCA_000648675.3
- Location
- NW:350715-434054[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.1e-102 1.2e-98 329.5 38.9 1 300 28 330 28 330 0.93 2 3 0.0034 39 2.8 2.8 120 172 328 380 327 384 0.92 3 3 0.06 6.9e+02 -1.3 5.5 137 165 362 390 341 404 0.38
Sequence Information
- Coding Sequence
- ATGGACACAATCGGTGGGAGGCGCAGGGGTGTGACCAACCACACAGCCGAAGACCAGGCTTTGGATCAAATCGCGAGAGAGGCCGAAGCTCGATTGGCTGCAAAACGTCAAGCAAGAGCCGAGGCCAGGGAGATTCGTATGAGAGAGTTGGAAAGGCAGCAAAAAGAATCTGATGAAAATGCCGACAGGATATATGACATGTACCCCAGTACTCCTGatggGATTACAAGATCAGCCAGGGTATCAGCTACGCTGAACAATAGCAGACTTTCTGCTTCCAACAGTTACCAGTCGTCCCGAAGGAGTTCTGAAGATTCATTGGAGGAAAACACTTCACTCAGAGATGTGCGGGGTGAACTTCGAGAGGTCGAAGACAAGTTCAGGAGGGCCATGATAGGAAATGCCCAATTGGACAATGAAAAAGctgcagcagcgtatcaagtgGAACTTTATAAGGATAGGTACGAAGAATTAGAAGAAGAACACAACCAACTACAGagggaacataaagaaaaatgcaGACAACTAGAACAGAATAAAAGGGATCAAGCAAAACTCCAGAAAGACCTCGAAGCAGCTTTGGCAGCACTTCAAGAAAGAGACCGACTGATTGAGGAACAAGGATTGGTGATAGTGGGTGGCGAGACTTCTTCAAGTGCAACGGAGAGCGACGAGGAAGATGATGCAGGAGGGGGCGAGCGCAAGGGCAGAGAAAAGCACCGGAAAGCACTAGTCTCCTCAGATATGGCTAAACTTTTAGACTCAGTAGGTCACGGCTCTTTAGATGTGCGATTGAAAAAATTGGCTGCAGAACGAAACGAACTCCAAGACGAATTAAGACATGTAAAACTCGAattggaagaagaaaaatcgaaaaatagtCGGttcggttcgaatcctgccGACATCGAAGAATTACAacgAGAAGCCAATAAACAGTTAGGAGATTATAAATTCAAGCTTCAAAAAGCAGAGCAAGATGTTTCAACACTTCAAGCCACCgTTGCAAGGTTAGAAGGACAAGTCATGAGGTATAAGACAGCAGCTGAAGCGGCTGAGAAAGTGGAAGATGAACTGAAACTTGAAAGGCGAAAACTACAGAGAGAGttaagagAGTTTCAAGCTAAGGTTGAAGAATTAGAAACGTCTAACAACCATCTTCAAAAGAGACTGGACAAACTGAAGACGGCGAAGTCAGCTTTACTGAAGGATTTGTAG
- Protein Sequence
- MDTIGGRRRGVTNHTAEDQALDQIAREAEARLAAKRQARAEAREIRMRELERQQKESDENADRIYDMYPSTPDGITRSARVSATLNNSRLSASNSYQSSRRSSEDSLEENTSLRDVRGELREVEDKFRRAMIGNAQLDNEKAAAAYQVELYKDRYEELEEEHNQLQREHKEKCRQLEQNKRDQAKLQKDLEAALAALQERDRLIEEQGLVIVGGETSSSATESDEEDDAGGGERKGREKHRKALVSSDMAKLLDSVGHGSLDVRLKKLAAERNELQDELRHVKLELEEEKSKNSRFGSNPADIEELQREANKQLGDYKFKLQKAEQDVSTLQATVARLEGQVMRYKTAAEAAEKVEDELKLERRKLQRELREFQAKVEELETSNNHLQKRLDKLKTAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00386350;
- 90% Identity
- iTF_01108409;
- 80% Identity
- -