Ocom060730.1
Basic Information
- Insect
- Ophraella communa
- Gene Symbol
- dmd-4_1
- Assembly
- GCA_035357415.1
- Location
- CM068989.1:34939363-34946724[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.9e-25 3e-20 74.2 11.9 1 47 9 55 9 55 0.98 2 2 0.016 7.9e+02 2.4 0.9 29 36 240 247 238 253 0.83
Sequence Information
- Coding Sequence
- ATGGCGTCCATTTCAAAACCTGGAAGAGTACCTAAATGTGCTCGTTGTAGAAACCATGGTATGATTTCCACATTGAGAGGTCACAAGAAACAatgtatttacaaaaattgcaaCTGTCAAAAATGTGGACTTATTAAGGAGCGTCAACGAATTATGGCTGCTCAGgtaGCTTTAAAGCGCCAACAGGCGGCTGAAGATGCAATAGCTCTTCATCTAGCAGCTAAAGAGAGCGGCGCAACTTATGAATATCTACCACCAGGACGCATATTTGGCATGCAAGTTACTTCTCCTGAGCCTGAAGCGCTGAGCACTAAAAGTGATTCCGTCAGTTCCCCCAACCCAACAAGTATAGAAAATATCGAAGTTAGTCAAGCCTCTATAGATATGTTGGCTCAACTTTTCCCCAATAAGAAAAGAACTGTTTTGGAACTAGTGTTAAAAAGaTGTAACCACGATCTTAGAAAAGCTATTGAACATGTTAACATTAACAACAGTCAAGAATCTGCGGATTTTCAAACTGTAGCTGAAGAATCTACGTCTGCATTTCGACCAGTTAACGCAGCTACAAAATCTTCAAAGCCTTACGTGGTTCCTCACTCTGGCAGTTTCTCCTTCATACCCAACAAAACGTTTAGCTTGTATCATCCGTTTTGGCCGTTATTTAATTATCAGTTACCCCAGCCGATACTACCCAGTCCTGTTTTGGTTCAAGGGATTTGTGAATGCGATCAATGTAGAGCGTCTGCCAGAGTAAATGTTGGTGCAGGTTGA
- Protein Sequence
- MASISKPGRVPKCARCRNHGMISTLRGHKKQCIYKNCNCQKCGLIKERQRIMAAQVALKRQQAAEDAIALHLAAKESGATYEYLPPGRIFGMQVTSPEPEALSTKSDSVSSPNPTSIENIEVSQASIDMLAQLFPNKKRTVLELVLKRCNHDLRKAIEHVNINNSQESADFQTVAEESTSAFRPVNAATKSSKPYVVPHSGSFSFIPNKTFSLYHPFWPLFNYQLPQPILPSPVLVQGICECDQCRASARVNVGAG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00735587;
- 90% Identity
- iTF_00910770; iTF_00735587;
- 80% Identity
- -