Gnym036778.1
Basic Information
- Insect
- Galerucella nymphaeae
- Gene Symbol
- dmd-4
- Assembly
- GCA_963978555.1
- Location
- OZ021719.1:5095399-5098160[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.9e-25 1.2e-20 74.2 11.9 1 47 9 55 9 55 0.98 2 2 0.0085 1.2e+02 3.9 1.2 29 38 241 250 239 254 0.84
Sequence Information
- Coding Sequence
- ATGGCGTCTGTTGCGAAACCTGGAAGAGTACCAAAATGTGCTCGCTGCAGAAATCATGGCATGATCTCTACTTTAAGAGGACACAAGAAGCAATGTATatacaaaaattgtaattgtcaaaAATGCGGGCTTATCAAAGAACGTCAAAGAATTATGGCTGCTCAGgTAGCTTTAAAACGTCAACAAGCAGCAGAGGATGCTATAGCACTTCATCTGGCAGCCAAAGAAAGTGGAGCGACTTACGAATATCTACCACCAGGTCGAATTTTTGGCATGCAGGTTACTTCCCCCGAACCAGAAGCTTCCAGCGCTGCTAAAAGTGATTGCGATGGTTCTCCTGCAGATCTTACAAATACAGAAAACATAGAAGTTAGTCAAGCTTCTATAGATATGCTGGCTCAATTATTTCCGAATAAGAAGAGGAGTGTACTGGAGCTAGTTTTAAAAAGatGCAATCACGATCTTCGAAAAGCAATCGAACACGTTAACATTAACAATAGCCAAGATTCCGCGGAGTTACAGCCAACAGTTGAAGAATCCACCTCAGCCTTTCGACCTGTTAACACCAGTACGAAATCTTCGAAGCCTTACGTGGTCCCTCATTCTGGTAGCTTCTCCTTCATTCCTAACAAAACGTTTAGTTTGTATCCGTTTTGGCCGTTATTTAACTATCAGCTACCTCAGCCGATTCTGCCCAGTCCGGTTTTGGTTCAGGGTATTTGTGAGTGCGATCAGTGTAGAGTAACGACCAGAGTTAACGTTGGAACAGGCTGA
- Protein Sequence
- MASVAKPGRVPKCARCRNHGMISTLRGHKKQCIYKNCNCQKCGLIKERQRIMAAQVALKRQQAAEDAIALHLAAKESGATYEYLPPGRIFGMQVTSPEPEASSAAKSDCDGSPADLTNTENIEVSQASIDMLAQLFPNKKRSVLELVLKRCNHDLRKAIEHVNINNSQDSAELQPTVEESTSAFRPVNTSTKSSKPYVVPHSGSFSFIPNKTFSLYPFWPLFNYQLPQPILPSPVLVQGICECDQCRVTTRVNVGTG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00792202; iTF_00910770; iTF_01105946; iTF_00387264;
- 90% Identity
- iTF_01105946;
- 80% Identity
- -