Basic Information

Insect: Ophonus ardosiacus
Gene Symbol: RREB1
Assembly: GCA_943138245.1
Location: CALPBP010000579.1:225714-234769[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 8.9e-05 0.016 17.2 1.2 1 23 73 95 73 95 0.98

2 15 0.00017 0.031 16.3 0.3 1 23 107 129 107 129 0.98

3 15 4.5e-07 8.2e-05 24.4 2.0 1 23 135 157 135 157 0.99

4 15 0.071 13 8.1 2.9 2 23 266 288 265 289 0.94

5 15 0.65 1.2e+02 5.0 0.1 1 20 342 361 342 363 0.94

6 15 0.032 5.8 9.2 0.1 1 23 498 520 498 520 0.97

7 15 3.4e-06 0.00061 21.7 1.1 1 23 530 552 530 552 0.99

8 15 0.00096 0.18 13.9 3.1 1 23 558 581 558 581 0.97

9 15 0.00082 0.15 14.2 2.8 1 23 966 989 966 989 0.96

10 15 0.0012 0.23 13.6 1.4 2 23 1258 1279 1257 1279 0.97

11 15 0.1 19 7.6 4.2 1 23 1285 1308 1285 1308 0.96

12 15 0.12 23 7.3 4.0 1 20 1339 1359 1339 1363 0.94

13 15 0.21 37 6.6 0.7 1 23 1430 1453 1430 1453 0.95

14 15 0.019 3.5 9.9 0.5 3 23 1503 1523 1501 1523 0.93

15 15 0.0086 1.6 11.0 5.5 1 23 1529 1551 1529 1551 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	8.9e-05	0.016	17.2	1.2	1	23	73	95	73	95	0.98
2	15	0.00017	0.031	16.3	0.3	1	23	107	129	107	129	0.98
3	15	4.5e-07	8.2e-05	24.4	2.0	1	23	135	157	135	157	0.99
4	15	0.071	13	8.1	2.9	2	23	266	288	265	289	0.94
5	15	0.65	1.2e+02	5.0	0.1	1	20	342	361	342	363	0.94
6	15	0.032	5.8	9.2	0.1	1	23	498	520	498	520	0.97
7	15	3.4e-06	0.00061	21.7	1.1	1	23	530	552	530	552	0.99
8	15	0.00096	0.18	13.9	3.1	1	23	558	581	558	581	0.97
9	15	0.00082	0.15	14.2	2.8	1	23	966	989	966	989	0.96
10	15	0.0012	0.23	13.6	1.4	2	23	1258	1279	1257	1279	0.97
11	15	0.1	19	7.6	4.2	1	23	1285	1308	1285	1308	0.96
12	15	0.12	23	7.3	4.0	1	20	1339	1359	1339	1363	0.94
13	15	0.21	37	6.6	0.7	1	23	1430	1453	1430	1453	0.95
14	15	0.019	3.5	9.9	0.5	3	23	1503	1523	1501	1523	0.93
15	15	0.0086	1.6	11.0	5.5	1	23	1529	1551	1529	1551	0.98

Sequence Information

Coding Sequence: ATGGATGATTCGCTCAACAGTACCAAAGATAGCCAAAGAAAAAACGATACAGAGGACAGCATGCTCGAAAGCAGTTCCGCTGTGTCTGACAACCTTCATGATACCATTTCAACCCATGACTCTGACGTAGAGCCCATGGACATCAGCAATAAGACAACAACAACCGTAGACAGCGATAATCAAAGCGACTGCAGTTCTCCTAGCAACCCCACGAAGTACTTCTGTCCAATATGCGATATTACTCTCACTTCTCAACACGAATTTACCCTCCACATTCGCTCTCACAACAACGACAACGAAGTAGTATCAGATAAGGGCTACACGTGTAGAATTTGCTCAAAAGTGTTGAGTTCTAGTTCTAGTTTGGACAGGCACGTACTTGTTCATAGTGGGGAACGACCCTTTCGTTGTAAAATCTGTTCTGTGACTTTTACCACTAATGGAAATATGAACAGGCATATGCGGACTCATTCGCAAAAAACTGGAGAGAGCTATGAATCTGATGGAAGTACCGATAGTAATACTAGTGTTAATTCTAACGGAAAATCTAGAAAACGTAGATTagagtttaataataataaattagtagACAACAgcaataaaagaaaatcagACTGTTTTATTAACGAAGAAGATGACAACTATATGCATCGGAGAAAATCAAAAaactttaacaataataataacataagtGTAACACAAAAATACCACTGTCCGGTCTGCGACAGGGACAACTTTGCGTCTTTAAATGTTCTAGAAACTCATCTTGAAGACCACCATCCTGACTTTGAAGTTAAATGTGTATCTTGCAATCTAAGCTTCAAAAACCATCGTGCCTTGAATCTTCACAGAGATATGGTGCATCATACTGAACAACAACAtaacataaacaataaaaacattaaaaacgcTCATATCGGTTTTAACGATTTGACGTTTGTTGACTTCTCTAGTAATAAATTTGCACAAATTGCTCGGTTTGAATGTGagaaaaatttacataaaccTATCACAGGACAAAAGtttatttgtgaaaaatgttcGATAGCTTTTCCTTGTTCAAGTGCGTTAGAAATGCATCAAGACGAGTGTTGCAAAAATAAACATAGAAGAGAAATTGAATATCCTACTGATTTATCAAGAAAATCACACGAAGACGACATGCAAAGAGAAAACTTTTTTGCGCGTTTAGACTTGCAAAACAAATCTGGAAGCATTTCTCCAGTATCTCCAGTTGTTGTAGAAGAACCAAAAATTCCAGAAAGTCGATCGCAAATTAAATCTACTTCAGACTCCAAAGATTTGGCTGATATTCAGTCTATTTTATCCATGACATCAAATGGAAGTTTGCTACAACATTTGCGAACGAAACCACCTTCTGAATTATTACAGTTACCATCAGAAACTTCCAGAAATTCGGAACAACATAATGAAGAAGAAACTCAAGACGCATTTGCTGCAGAGTTTAGAAAAATGAAACTAAGAGGTGAATTTCCTTGCCGATTATGTACAGCAGTATTTCCTAACCTTCGCGCATTAAAAGGCCACAATCGTGTGCATTTAACTGGTACGGGTAATTCTGGTCCATACAGATGCAATATGTGTCCGCATAGCTCTTCTGACAAAGCTGCTCTCATCAGACATATGCGTACCCACAATGGCGATAGGCCTTACGAATGCTCTCTTTGCAATTATGCTTTTACTACCAAAGCAAATTGCGAAAGACATTTGAGGAATAGACATTCAAAAGTTACCAGAGAAGAAGTTAAGAAGTCTATTATTTATCACCCTTCTGAAGATCCAACAAATGatgaaatcaataaaattaattcggctcgaaatgaaatcaaacataGCTATCCCAGCATCTCGAATGAGGAAGATCTACGATCTAGAGATTCTTTGgaacataaaaatattgttattccTGGTCTCTCTATACCATCGACTATAATTAATAAAGGGTTAACTATAAATCGACCAATTGTTCCAGAACACCATTTAAACAAAGAGTTACCTCCCGTAAAAGATTCAAAAGTATTAGCAAAAGAAGATAAAATAGATTTCCCGTATCCTAAGAAACATACTTTCAACTATCCTCCTGATCTACCTGACAAAATCAAAGAAAACTTGATCCATACaaaaatacaagttaaaaatctgaacgatttgaaattgaaacaaatccCTGACTATGACATTCATTCCGATGAAGAAGAATCAAATACTAACATGTCTTCAAGTTTTGAAGATTATCCCAAAACATCTGTTGAACACCCTATGGATTTAAGTATGGACGTATTAGATTTGAGCAAGAAAAAAGAATCTCCAAGTCCTAAAATTGATAACGAACCTCAAGATTTCACTAAAAAGACTTTAGAATCAACTCCGGCTGTTCCTCCAAGTCCTTCAGCAGCTCAAATGTTACTTGCGCAACAATTTCTCAAGCATCCTTACATTAATCAATTATCACAATTTTATCAAAATCCTGCTCTTTTtcctaatttaaatttacaacaaaatttatttccatttttctTTCCTCCTCCTTTTTTAAATCCCCAAGAAGTAAAAGAGAGAATGCTTCGGCTCCAATTAAGTGGAGGAACAATGATTAGTGAATTTCCACCTGTACCGCCAAATGGAATACAATCTTTCAATCAAGAATTGCCTAATATTCCAGAAATGAAGTACTCTTTGACAAAACCAGAAGAAGACAAGACTCCTCTACATATAAACACACAATTAGCTGAAAATGTTAGCAAGCTACATTCGCCTAAACCACAACAAAAGACTCCAGATATGATCCATAGTCCAAATTCTGTCAAAATGGTCATTAAAAATGGTGTTTTAATGCCAAAACAAAAACAACGGCGGTATAGAACAGAAAGACCGTTTTCGTGTGAACATTGCTCAGCAAGATTTACTCTAAGATCAAATATGGAACGACATATAAAACAACAACATCCACAATTTTGGTCTCAAAGACAACGCGCTGGTTTAAGCGGAGCTGGAAGGAAACCAATAAGCGCAACTGCTACCAACATGCAAAATAACACCAAACCACCTTTCTATGACTTAAATATCCCTAACTATGACATGCACATACCAAAGATTCAAGACTCTGTAGTCAATGAAACCAAAGATAAAGACATAAACATTCAACATCATGTACCTATATCTCAACATGTCAAATACGCTCTTCTAGCCCAACAATTAAAAGCTAGAAacatagaaaataattcattaattagTAAAGACCGCTTGCCTCAAGATGACGATGAGGATGCATTAATAATCGACGAAgaaaatgaagaagaaaaacCTAAACCTGAATCCAAAGAATCGACAGAAATAAGAATCGACATCGACAACAAACCAAAAACCCTGGAAGAAAAAATGTTAGAACTTCGCCAAATGCGTGagaaagaaattaaaaacaacGAAAAATTGCACATGAATGTTGCAGAAACTGGtttgttaaaattaatgaaGCCTGAAGAAGCAGGGCAAGATCTGGTACCAGTTTCTAGACTGTTGGATAATGCAGTCAGTTCTCAGTTACCATTTCGGGAGTATTTTCGCCGCGAAggggaagacaatgaagcagaAGGTGTCAGTGAAGAAGATGAAGAAGGTTTAGTTGCTAGTGGTAGCACAAGCGAGGGAAATGGATCTGGTAGCGATGAAAATAAATCTGAAAACGAAACTGCCACCACCAACGAACCCGGGAAGAAAAGATCTGCCTACTCTTTAGCACCAAATCGAGTAAGTTGCCCGTACTGCCATCGCAAATTTCCTTGGACTTCATCTTTGAGACGCCACGTCTTAACCCATACTGGACAGAAACCTTTTAAATGTTCCCAATGTCCTCTTTTATTCACAACGAAATCAAACTGTGATCGGCATTTACTTCGAAAACACGGAAATACCACAAACACCCAATCTGATTCGTCGAATAATAACAACAACAGTAGTCAGAATTATATGATGAGAAATGTTCCAGAAAGACCTTACAAGTGCTCAAGTTGTCCTAGTTCAACATTTTCCACTCTGAGCAATCTCAAGAAACACATGTCTTGTAAACATACCATTGTATCTTCAAGTGCTGATTCTTTGAAGGAAGATATCAGGCCACCTAGTAGGGAATATGAAAGTTTGGCCAGTTCTGAAGATGAACGAGTCAACAAAGACAACAAAAGTGACTGGGAAAATCAGATTTTACATTCCAAAATTCCAATTCCTAATAATGATCAGAACACCACGATACAAACAGCTGATTTGCCATTCAAATGCCATTTATGTGACAGTTCTTACGCAGAAAGACAAGACGCATTAGACCACATTCGAGATACACATGTATCCGAGTATGAATTGTTAATGGCTAAAGGAGCTTTAGACGCGAACACTTCTGGCCACGATGATACACATTTAACTAACCACGATGCCGATGACGACGAACAACTTCGTGGTAAGTTCCCAGATTATGCGAATCGAAAAGTGATGTGTGCTTTTTGCATGCGTCGATTTTGGTCCGCTGAAGATCTCAGACGACATATGAGAACACACACAGGCGAACGGCCATTTTCTTGCGATGTTTGTAGCAGAAGATTCACTTTAAAACACAGCATGTTGCGGCATCGGAAGAAACACAACATGGCCGCTAATTTGCTGGAAGATGGTATTCTGGCAAGCGGAGATGAAGAAGCAAATCCTTCTCAAATACATTATGACAAATttgctaaaattaataacaataacaatctAGTGCCTGAGAATCCAGCAAGAAGAAAGCAAGAAAAGTCGAGTGGCGAAGATTCTGAAGGGACAGAAGGAAATGATTTGATTGGAAATCTGCTTGGAATTAGAGATAAATCAATAATTGACCAAGTGTTGGTGTCGTCAGCTGATGATGCCGCCAAACTATTGGGTGTGAATAATGGCCAAGAGTAA
Protein Sequence: MDDSLNSTKDSQRKNDTEDSMLESSSAVSDNLHDTISTHDSDVEPMDISNKTTTTVDSDNQSDCSSPSNPTKYFCPICDITLTSQHEFTLHIRSHNNDNEVVSDKGYTCRICSKVLSSSSSLDRHVLVHSGERPFRCKICSVTFTTNGNMNRHMRTHSQKTGESYESDGSTDSNTSVNSNGKSRKRRLEFNNNKLVDNSNKRKSDCFINEEDDNYMHRRKSKNFNNNNNISVTQKYHCPVCDRDNFASLNVLETHLEDHHPDFEVKCVSCNLSFKNHRALNLHRDMVHHTEQQHNINNKNIKNAHIGFNDLTFVDFSSNKFAQIARFECEKNLHKPITGQKFICEKCSIAFPCSSALEMHQDECCKNKHRREIEYPTDLSRKSHEDDMQRENFFARLDLQNKSGSISPVSPVVVEEPKIPESRSQIKSTSDSKDLADIQSILSMTSNGSLLQHLRTKPPSELLQLPSETSRNSEQHNEEETQDAFAAEFRKMKLRGEFPCRLCTAVFPNLRALKGHNRVHLTGTGNSGPYRCNMCPHSSSDKAALIRHMRTHNGDRPYECSLCNYAFTTKANCERHLRNRHSKVTREEVKKSIIYHPSEDPTNDEINKINSARNEIKHSYPSISNEEDLRSRDSLEHKNIVIPGLSIPSTIINKGLTINRPIVPEHHLNKELPPVKDSKVLAKEDKIDFPYPKKHTFNYPPDLPDKIKENLIHTKIQVKNLNDLKLKQIPDYDIHSDEEESNTNMSSSFEDYPKTSVEHPMDLSMDVLDLSKKKESPSPKIDNEPQDFTKKTLESTPAVPPSPSAAQMLLAQQFLKHPYINQLSQFYQNPALFPNLNLQQNLFPFFFPPPFLNPQEVKERMLRLQLSGGTMISEFPPVPPNGIQSFNQELPNIPEMKYSLTKPEEDKTPLHINTQLAENVSKLHSPKPQQKTPDMIHSPNSVKMVIKNGVLMPKQKQRRYRTERPFSCEHCSARFTLRSNMERHIKQQHPQFWSQRQRAGLSGAGRKPISATATNMQNNTKPPFYDLNIPNYDMHIPKIQDSVVNETKDKDINIQHHVPISQHVKYALLAQQLKARNIENNSLISKDRLPQDDDEDALIIDEENEEEKPKPESKESTEIRIDIDNKPKTLEEKMLELRQMREKEIKNNEKLHMNVAETGLLKLMKPEEAGQDLVPVSRLLDNAVSSQLPFREYFRREGEDNEAEGVSEEDEEGLVASGSTSEGNGSGSDENKSENETATTNEPGKKRSAYSLAPNRVSCPYCHRKFPWTSSLRRHVLTHTGQKPFKCSQCPLLFTTKSNCDRHLLRKHGNTTNTQSDSSNNNNNSSQNYMMRNVPERPYKCSSCPSSTFSTLSNLKKHMSCKHTIVSSSADSLKEDIRPPSREYESLASSEDERVNKDNKSDWENQILHSKIPIPNNDQNTTIQTADLPFKCHLCDSSYAERQDALDHIRDTHVSEYELLMAKGALDANTSGHDDTHLTNHDADDDEQLRGKFPDYANRKVMCAFCMRRFWSAEDLRRHMRTHTGERPFSCDVCSRRFTLKHSMLRHRKKHNMAANLLEDGILASGDEEANPSQIHYDKFAKINNNNNLVPENPARRKQEKSSGEDSEGTEGNDLIGNLLGIRDKSIIDQVLVSSADDAAKLLGVNNGQE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01275656;
90% Identity: iTF_00769110;
80% Identity: -