Basic Information

Insect: Ophonus ardosiacus
Gene Symbol: -
Assembly: GCA_943138245.1
Location: CALPBP010000400.1:1276918-1279323[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 5.2e-06 0.00095 21.1 4.2 1 23 133 155 133 155 0.98

2 23 0.00091 0.17 14.0 3.4 1 23 162 184 162 184 0.98

3 23 1.1e-05 0.0021 20.0 2.2 1 23 191 213 191 213 0.97

4 23 0.00035 0.063 15.3 6.5 1 23 218 240 218 240 0.96

5 23 0.031 5.7 9.2 8.3 1 23 246 268 246 268 0.98

6 23 0.0006 0.11 14.6 3.1 1 23 274 296 274 296 0.99

7 23 7.4e-06 0.0014 20.6 4.3 1 23 302 324 302 324 0.98

8 23 0.00033 0.06 15.4 0.2 2 23 331 352 330 352 0.97

9 23 6.9e-05 0.013 17.6 2.8 1 23 358 380 358 380 0.98

10 23 1.3e-05 0.0024 19.8 5.7 1 23 386 408 386 408 0.98

11 23 8.4e-05 0.015 17.3 0.8 2 23 415 436 414 436 0.96

12 23 5.3e-05 0.0096 17.9 0.3 1 23 441 463 441 463 0.95

13 23 0.00047 0.086 14.9 0.3 2 23 469 491 468 491 0.96

14 23 0.00043 0.078 15.1 1.5 1 23 511 534 511 534 0.94

15 23 1.7e-05 0.0032 19.4 0.3 2 23 542 563 541 563 0.97

16 23 9.5e-05 0.017 17.1 4.5 1 23 569 591 569 591 0.96

17 23 7.3e-05 0.013 17.5 0.2 1 23 597 620 597 620 0.98

18 23 2.9e-07 5.3e-05 25.0 0.8 1 23 628 650 628 650 0.98

19 23 0.056 10 8.4 1.2 1 23 656 679 656 679 0.96

20 23 1.5e-06 0.00027 22.8 0.2 1 23 685 707 685 707 0.96

21 23 5.3e-06 0.00096 21.1 5.8 1 23 713 735 713 735 0.98

22 23 3.1e-05 0.0056 18.7 1.6 2 23 741 762 741 762 0.97

23 23 8.2e-05 0.015 17.3 1.0 3 23 769 789 767 789 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	5.2e-06	0.00095	21.1	4.2	1	23	133	155	133	155	0.98
2	23	0.00091	0.17	14.0	3.4	1	23	162	184	162	184	0.98
3	23	1.1e-05	0.0021	20.0	2.2	1	23	191	213	191	213	0.97
4	23	0.00035	0.063	15.3	6.5	1	23	218	240	218	240	0.96
5	23	0.031	5.7	9.2	8.3	1	23	246	268	246	268	0.98
6	23	0.0006	0.11	14.6	3.1	1	23	274	296	274	296	0.99
7	23	7.4e-06	0.0014	20.6	4.3	1	23	302	324	302	324	0.98
8	23	0.00033	0.06	15.4	0.2	2	23	331	352	330	352	0.97
9	23	6.9e-05	0.013	17.6	2.8	1	23	358	380	358	380	0.98
10	23	1.3e-05	0.0024	19.8	5.7	1	23	386	408	386	408	0.98
11	23	8.4e-05	0.015	17.3	0.8	2	23	415	436	414	436	0.96
12	23	5.3e-05	0.0096	17.9	0.3	1	23	441	463	441	463	0.95
13	23	0.00047	0.086	14.9	0.3	2	23	469	491	468	491	0.96
14	23	0.00043	0.078	15.1	1.5	1	23	511	534	511	534	0.94
15	23	1.7e-05	0.0032	19.4	0.3	2	23	542	563	541	563	0.97
16	23	9.5e-05	0.017	17.1	4.5	1	23	569	591	569	591	0.96
17	23	7.3e-05	0.013	17.5	0.2	1	23	597	620	597	620	0.98
18	23	2.9e-07	5.3e-05	25.0	0.8	1	23	628	650	628	650	0.98
19	23	0.056	10	8.4	1.2	1	23	656	679	656	679	0.96
20	23	1.5e-06	0.00027	22.8	0.2	1	23	685	707	685	707	0.96
21	23	5.3e-06	0.00096	21.1	5.8	1	23	713	735	713	735	0.98
22	23	3.1e-05	0.0056	18.7	1.6	2	23	741	762	741	762	0.97
23	23	8.2e-05	0.015	17.3	1.0	3	23	769	789	767	789	0.97

Sequence Information

Coding Sequence: ATGGAAACAAACAATACTTTTCTGGATCATGCTATAAAGAAAGAATATGATGAAGAGGAAGAAAGTGAATTGGATCAGTCCCCTTGTAGTTATATCGAGGACGAACAAAGCTCTAATGAAATGGCTGAATCTGAAAATGACTTACATGATATGTCCATTAAGCATGAACAAAATGACACCCAGGATTATTCATTTGACATGGATCCTGAAAATGAGAACgatgtaaaaactttaaatgtagATATCATGTCATTTTTAGCTGTAACCCTAGACGAAGGAGATGCTACTAATAAATGTCAAGACATAGATACCTCACTAGAAATCAAAGCTGAAGATGTTTCTGATGAAATTGATATTTTACAAACTTCTCTTGTTGAAGATCCATTTTTAAAACGATTTCCTTGCACGATATGTAAAAGAAGTTACAGATTTAGAAGTAGTTTGATCCATCACATGAGAAGACATCCAATTAGAAAACAGTATTTTGAATGTAGCACCTGTCAAAAAAAGTTTGCAAAAGTTCATAATTATATTCAACATTTAAGTACGCATGATGGAGACATTCACATATTTCATTGTCCGTATTGCGATAAAAATTTTCCTTCTTCGAAAACCCTAAAGGTTCATGTACAAAATCATGTTAAAAAAACCTTTTCTTGTAAATATTGCAAGAAGgaattttttcgaaaaactcATTTGGAGCGACATGAATATAGCCATACGGGCGAAAAACCGTACAAATGTAAAGAATGCAAGAAATGTTTTACTTGTAGCGAATACCTATTAGAACACAATAAGACTCACATAAAGACCAAGCCATATACATGTCTTACTTGCCATAGAAAATTTGCCAACTCTTCTATATTATCTGAACATATGCGCCGACATACCGGCGAACGGCCTTTTCAGTGCAAAACTTGCGAAAAATCGTTTCACAGTAGATCAGATTTAAATAAGCATGAAAGGATTCACACTGGAGAAAGAAATGTACCTTGTCCTAGTtgtaaaagattattttatacaGACTCTCAACTTGCAGTTCATATGAAAACTCATTCTGACGACAAGAAATTTATTTGCACAACGTGTAacagaaaatttgattttttatcacaattatcTCGCCATACTCGCATGCATACAGGCGAACGACCATTTCACTGTAAAGTTTGTGGGAAGGACTTTATGAGTTCATCTCATCTTTATCGCCACCTAAGATCACATTCATTTAAACCAAATCTAACTTGTGATATATGTAACAGGACTTTTAAACGAGTTGCATTTTTGGAAAGACATCGCGACTCAcatttaaatgataaatttcCTTGCGATGAATGTGGCAGTACTTTCAAGAAATTATCGGAATTAGAACGGCATAAAGAGGGCCACGCGGAAGATATGTTACCATGtacactttgtaaacaaatttttaaaagtgagttaaatttaaaagaacataTAAAGAGCGCCCATGATGAAAAACAAATTGATTTAACTCAATATTATACTCGTCAAGAGGGAAAGAAATCATTTGCATGTAATCTTTGTGACAGATCATATCAAACAAGATCAAAATTTGAAcggcattatttaaatatacatggAGAAGCTCCAAGAACTCTTCCATGTCCAATATGCTCAAAATTGTTTCGAAATACAACAGAATTAAAAGCACATATTAAAAGGCATGCGAAGATAAAACCCCACTGTTGTGACCTTTGCGAGAGAAGTTTTTCCTCCAAAGCTCAACTTGTGAGGCATACGAGGCTTCATATGGGAGACAGGCCTTTTAAATGTGATAGTTGCCCGAAAGCGTTTGCTTTAGAAACCGAATTAACTAGGCATGTACGAATTCGGCATATGGGAGCAGAGTTTAGGAATTTTCCTTGCACATTATGTGATAAAAGGTTTTCAACTAGAGCCCAAGTAGAGCGACATATTCGAACCCATACTGGGGAACGGCCTTTTGATTGTGAATtctgtgaattaaaatttaaaggtCTGTATGAAAAGCAAAGACATGTAAAGAAAATTCATATGAACGATCGACCATTCGAATGCCAAGATTGTGATAAAAGTTTTGTTAGTAACGCGGAATTAAATCGTCATTCTATTATACATTCTGGTATTAGGGCACACCAGTGTCCAGAATGCCATAAGTCCTTCTTCAATCAAAATGAACTTAGGCGGCATGTGAAAAGACATGCTGCTTATACAAATGTTTGCCATATTTGCGCCAAAAGTTTCAGTACAACTGAATTATTAAATCGACATCTCGAAAGACATAACTATAGTCGTGTAATCTGtgaaatttgtaacaaaatttgTGCATCTAAAATTCATTTAGCAAAGCATATGCTTATTCATACTATGAGTAGTGATGGATCTGGTACTTCttataattaa
Protein Sequence: METNNTFLDHAIKKEYDEEEESELDQSPCSYIEDEQSSNEMAESENDLHDMSIKHEQNDTQDYSFDMDPENENDVKTLNVDIMSFLAVTLDEGDATNKCQDIDTSLEIKAEDVSDEIDILQTSLVEDPFLKRFPCTICKRSYRFRSSLIHHMRRHPIRKQYFECSTCQKKFAKVHNYIQHLSTHDGDIHIFHCPYCDKNFPSSKTLKVHVQNHVKKTFSCKYCKKEFFRKTHLERHEYSHTGEKPYKCKECKKCFTCSEYLLEHNKTHIKTKPYTCLTCHRKFANSSILSEHMRRHTGERPFQCKTCEKSFHSRSDLNKHERIHTGERNVPCPSCKRLFYTDSQLAVHMKTHSDDKKFICTTCNRKFDFLSQLSRHTRMHTGERPFHCKVCGKDFMSSSHLYRHLRSHSFKPNLTCDICNRTFKRVAFLERHRDSHLNDKFPCDECGSTFKKLSELERHKEGHAEDMLPCTLCKQIFKSELNLKEHIKSAHDEKQIDLTQYYTRQEGKKSFACNLCDRSYQTRSKFERHYLNIHGEAPRTLPCPICSKLFRNTTELKAHIKRHAKIKPHCCDLCERSFSSKAQLVRHTRLHMGDRPFKCDSCPKAFALETELTRHVRIRHMGAEFRNFPCTLCDKRFSTRAQVERHIRTHTGERPFDCEFCELKFKGLYEKQRHVKKIHMNDRPFECQDCDKSFVSNAELNRHSIIHSGIRAHQCPECHKSFFNQNELRRHVKRHAAYTNVCHICAKSFSTTELLNRHLERHNYSRVICEICNKICASKIHLAKHMLIHTMSSDGSGTSYN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00767412;
90% Identity: iTF_00768999; iTF_00767412;
80% Identity: -