Oobs001818.1
Basic Information
- Insect
- Ophion obscuratus
- Gene Symbol
- clz9
- Assembly
- GCA_964007375.1
- Location
- OZ023312.1:40676404-40678158[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.4 1.2e+04 -2.8 0.1 31 41 42 52 41 54 0.83 2 2 9.9e-09 1.4e-05 25.8 0.0 1 40 57 95 57 97 0.93
Sequence Information
- Coding Sequence
- ATGGAGACTGCGGCGCCACCTGATTTATTGATTCCATTTCCAGCGGAAGGGTGTAAAAAAGAAACTGTTTTGAAAGACGAAGACGAAGAAGTGATGGAAACTATAGACTCAACTATCACTCCACGGACTATTTCGAAAAGGAAGAGGACAAATGTTGCACGGGCATACACAGATGCTGATCTCGAGAACGCCTTAGACGCGGTGAAAACGGGAATGCCTGTAAAGACGGCAGCGAATCTTTACAAAATTCCAAAGACGACACTGCTCTACAAAAAGCGTGGCACATTACCACCTACGATAAAAACCCGTGGGCCTGAATGCAtacttggcgaaaaaaatgaaagtaaGCTCGTTGAGTGGATCTTGCACATGAGTCGAAGCGGCTTCCCTCCAACTCGACTCCAATTATTGGACAGTGTTCAACTGCTTCTGAAGCATCTAAAGATCGAGACTCAGTTTAAGGATAATCGCCCTGGGAGACATTGGTACGACGCTTTTAAAAATCGTCATCCGGAAATAGCTGAGAGAACGTCACAAAATTTGACGCGCAATCGAGCTGATTTAAGCGAGAAGAAGCTTCGAGGGTGGTTCAGCGAGGTACAGAAGTACTTTCAGTCAAAGTCACTCCTTGATATTGACGCTTCTCGCGTATTTAATTGCGACGAGTCGGCTTTTTTTCTGAGTCCAAAGGGGGGCTCGGTATCGACCAAAAAAGGTGACAAAACGGTATACAATTTCATCAATAATGATGAAAAAGAGTGCTTGACTACGCTTATCTGTGGAAGTGCGAGCGGTGAACTCGCGCCACCGATGGTACTTTTTTCTTACAAACGAATTCCCGGACGTGTCGCTGCACAAATGCCAAAAGACTGGAGCATCGGTCACTCGGATAGTGGATGGATGACTGGGGAAACGTTTTTCGAGTACGTTGCGAACGTTTTTTACCGATGGTTGCTGAAGAATGAAGTCGTGTTCCCAGTCATACTGTTTGTAGACGGGCATACTTCGCATTTGACCATGGCGTTGAGCGATTTTTGTCGGGAAAAGGGTATCGAGCTCGTGGCGCTATACCCAAATGCAACTCACATCTTACAGCCGCTGGACGTTGCATTTTTTCATCCCCTCAAGGGTGTATGGGGCAATGTAGTTCGTCATTGGCGACTAGAAAACAACGGTCAACGTTTAAAGCGGGAAGACTTCGCACCGCTTCTTCAGAAAGCTATCGAGGCTCTCGACGCAAAAAGCATACTGAAGAACGGTTTCAAAACAACTGGGCTCCACCCTTTTTCAGCCGATGGAATTAACTATCGGAAATTTTTCAAGAACGGCGATAGGTCCGAAAAGATCCCTCCGGTGACTCAAACCAAAGGACCTCGGCACAAAGAAATTGTAGAGTATGTTGAGAATAACATAGAAACCGAAGTGCTGGAGATGTTCAGAGACGTCAAAGAGAAAGCAGAATGGCGTGGCGATCTGACACATCACAGTTTATTCCATTTCTGGCGAAAAATAAAGAGTATTGGTATCGATGAAGCCAACGAAGTCAGTGACCGTATTTGA
- Protein Sequence
- METAAPPDLLIPFPAEGCKKETVLKDEDEEVMETIDSTITPRTISKRKRTNVARAYTDADLENALDAVKTGMPVKTAANLYKIPKTTLLYKKRGTLPPTIKTRGPECILGEKNESKLVEWILHMSRSGFPPTRLQLLDSVQLLLKHLKIETQFKDNRPGRHWYDAFKNRHPEIAERTSQNLTRNRADLSEKKLRGWFSEVQKYFQSKSLLDIDASRVFNCDESAFFLSPKGGSVSTKKGDKTVYNFINNDEKECLTTLICGSASGELAPPMVLFSYKRIPGRVAAQMPKDWSIGHSDSGWMTGETFFEYVANVFYRWLLKNEVVFPVILFVDGHTSHLTMALSDFCREKGIELVALYPNATHILQPLDVAFFHPLKGVWGNVVRHWRLENNGQRLKREDFAPLLQKAIEALDAKSILKNGFKTTGLHPFSADGINYRKFFKNGDRSEKIPPVTQTKGPRHKEIVEYVENNIETEVLEMFRDVKEKAEWRGDLTHHSLFHFWRKIKSIGIDEANEVSDRI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00254246;
- 90% Identity
- iTF_01056727; iTF_01379134;
- 80% Identity
- -