Basic Information

Insect: Ophion luteus
Gene Symbol: -
Assembly: GCA_944452655.1
Location: CALYBV010001946.1:212318-215853[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 6.4e-13 1e-09 38.5 0.0 1 39 139 178 139 182 0.90

2 4 2e-12 3.2e-09 36.9 0.1 2 39 194 231 193 234 0.94

3 4 1.1e-18 1.8e-15 57.0 0.0 2 45 249 293 248 293 0.97

4 4 2.4e-18 3.9e-15 55.9 0.0 1 42 300 342 300 343 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	6.4e-13	1e-09	38.5	0.0	1	39	139	178	139	182	0.90
2	4	2e-12	3.2e-09	36.9	0.1	2	39	194	231	193	234	0.94
3	4	1.1e-18	1.8e-15	57.0	0.0	2	45	249	293	248	293	0.97
4	4	2.4e-18	3.9e-15	55.9	0.0	1	42	300	342	300	343	0.97

Sequence Information

Coding Sequence: ATGTTCTGTCACACAGGTCTAGGTCATTACGGTCATCATCCAGATCCTGGAGAGGTAGATCTACCCCCGGAGACACAGCCAACGCCACCGAGCGCCACACTCGTCGGCACAACGATAACGCATCTTCGCGACCCCGACCATCACTCGACGGATATACAAAATTGCGACAGCGTTAAAATAAAATTCGAGACTCTGCACACGATGGACTCCTCCGACACGATCGACATCGACAGTCACATGTCCGATCGGGCCAGCGTCAGCTCGAAACACGCGGCCGACAACGATAACATGATGATGATAACACCGGAACTCTTGGGACTGATGCCCTCCGGTAGTTCCGTACACTCGGACTCGGGTGAGAACAACTCCCGAGGCGGTGGCTCCGGTTCTCATCATCACGGCTCGAAATCGTGGACTCAGGAGGACATGGATGCGGCGCTCGAAGCGCTGAGAAATCACGACATGAGCCTTACGAAAGCCTCAGCAACCTTTGGAATTCCGTCGACGACACTGTGGCAGAGGGCGCACAGGCTCGGTATCGACACACCGAAGAAAGACGGGCCGACGAAATCGTGGAGCGACGAGAGCCTGAACAACGCCCTCGAGGCACTGAGAACCGGCACGATATCGGCGAACAAAGCGTCAAAAGCATTCGGCATACCGTCCAGCACGCTTTACAAAATCGCGAGAAGAGAGGGCATCAGATTAGCGGCGCCGTTCAACGCGAGCCCGACTACTTGGGCACCGGCCGATCTCGACAGAGCACTCGAGGCGATTAGGTCGGGTCAGACTTCGGTACAGAGAGCGTCCACGGAATTTGGTATTCCGACGGGTACATTGTACGGTAGATGCAAGAGAGAGGGCATAGAATTGAGCCGTAGCAATCCCACACCCTGGAGCGAGGACGCGATGACAGAGGCACTCGAGTCCGTCAGATTGGGTCACATGAGCATCAATCAAGCTGCTATACATTACAATCTACCTTACTCGTCTCTCTACGGGCGCTTCAAGAGGGGCAAATACGAAGATCCGGTGGTGAGCGAGATGTCACAAGACGGCAGCAATCCTCACTTTCATTCGCATCAGAGTCCGCATCAAAATCACTCCTCGTCGCTACCCGATCAAATGCCTTATCAGGGCAGCTGA
Protein Sequence: MFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDPDHHSTDIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKHAADNDNMMMITPELLGLMPSGSSVHSDSGENNSRGGGSGSHHHGSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWAPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALESVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEDPVVSEMSQDGSNPHFHSHQSPHQNHSSSLPDQMPYQGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00707774;
90% Identity: iTF_00294380;
80% Identity: iTF_01102694;