Ocos008874.1
Basic Information
- Insect
- Ophion costatus
- Gene Symbol
- LZTR1
- Assembly
- GCA_951751655.1
- Location
- OX632359.1:1166822-1173316[-]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.2e-17 8.6e-15 55.4 0.0 2 108 351 479 350 481 0.86 2 4 2.3 9.3e+02 0.6 0.0 74 108 478 511 472 513 0.80 3 4 5.2e-20 2.1e-17 63.8 0.0 9 103 573 669 564 675 0.83 4 4 1.2 4.7e+02 1.5 0.1 76 100 674 698 667 707 0.80
Sequence Information
- Coding Sequence
- atggacagtatGGCCACCGCCGAATGCCTGACGCTGGATTTTGGTCCTTTCGAGACGGTGCACCGATGGCAGCGAATGCCGGAGTGCGACGAGTTCGTCGGGGCCAGACGCAGCAAGCACACGGTCGTCGCCTACAAAGACGCCATCTACGTGTTCGGCGGCGACAACGGCATCAGAATGCTCAACGATCTTTTGCGCTTCGACACTAAGGAAACTTCCTGGGGAACGGCCATCGCTACCGGCGCACCTCCCGCCCCCAGATATCATCATTCCGCCGTCGTCCATAACTCGTCCATGTTCGTTTTCGGCGGCTACACCGGCGACATACACTCCAACTCAAATCTCACCAACAAAAACGATCTCTTCGAGTACAAGTTCCAGACCGGACAGTGGATAGAGTGGAAGTTCATTGGAAAGACTCCCGTGGCGAGATCGGCCCACGGTGCGGCAATTTACGACAACAAGCTATGGATATTCGCCGGATACGACGGGAACGTTCGGCTGAACGACATGTGGACGATTTCACTGTCGCCGGAAGAGCCGAGGATCTGGAAGGAGGTCGTACAGTCGGGCGAATGTCCGCCAACCTGTTGCAACTTTCCGGTCGCCGTTGCTCGCGAATCAATGTTCGTTTTCAGCGGCCAGAGCGGCGCCAAGATCACCAACAGCCTCTTTCAATTCCACTTCAGAGAAAAACGATGGACTCGTATCTCGACGGAGCACATACTGCGGGGAGCGCCGCCTCCGCCGGCGCGTCGTTACGGCCACACGATGGTGGCGTTCGACCGTCACCTCTACGTGTTCGGTGGAACAGCGGACTCGACGCTCCCGAACGATCTTCACTCGTACGACCTGGACACGCAGACGTGGAACGTGGTGTTGCCCTCGTCCTCGAGCCAAGTGCCCTCGGGTCGTTTGTTCCACGCGGCCGCGGTAATCGGCGAGGCGATGTTCATATTCGGCGGTACGGTCGACAACAACGTTCGTTCCGGCGAAACTTATCGCTTTCAATTCTCCTCCTATCCCAAGTGCACGCTTCACGACGATTTCGgcaaattgttgaattcgcggCTCTTTTGCGACGTCGAATTCGTCGTGGGTGAACAGGAGAGCGAGACGAAGATACCGGCCCACGTGGCGATGGTAGCGGCGCGTTCGGAGTATCTGAGCGCGCGCATAAAGCACGCCCGGGAGCGTCGAGAGAAGTCAGCGGAGGGCGAGTCGCCCTTGCTCGAGGTCAAACTCGAGGACGTTGTGCCCGAGGCCTTCCAGATGGTCCTCAATTACATATACACCGACCGCATCGATCCGACCAAGAGAAGCGACGATCCCGAGCCCGGCAATCGCATCGTTCTCCTCACCATGGACGTATATCGATTGGCCGTTCAATTCAACATGGCCAGACTCGAACAACTTTGCGTTCACTATCTCGAAGCGACCATCAGCCACGCCAACGTACTCGTCGCTCTTCACAACGCTGCCCATCTCAATCTTCACTTCATCAAAGAAATATGCCTCGGCTTCGTCGTCAAAGAGACCAATTACAATCAGATCGTCATGAGCCAGGAATTCGAGACACTCGAGCAACCCCTCATGGTCGAAGTCATCAGAAGACGACAGATGCCTCAGGCGCGAAACTTCACCAAACAATACGAGCCAGGCACCGGCACCACCCTCGAACAGGACATGGAGGCCTTCCTGAAAAACGTCGGACGCGAGCTCTGCGACATCACACTCATGCTCGATGGCACACCGATTCCCGCTCACAAAGCTGTCCTCGCCGCTCGTTGCAGCTACTTCGAGGCCATGTTTCGATCGTTCATGCCTGAAAACAATACCGTCAATATTCAAATCGGCGAGATGATACCCTCCTCGGAATCGTTCGCCTCCCTCCTGAGGTACATCTATTACGCGGATGTCTCCATGCCGCCCGAGGATTCTCTCTATCTATTCACGGCACCCGTGTTCTACGGATTCACGAACAATCGCCTCCAGACCTTTTGCAAGCAGAATCTCGAGATGAACGTCACCTTCGAGAACGTCATACAAATATTGGAGGCTGCCGACCGAATGCAGGCAGCCGACATGAAGACTTACGCCTTGAATCTCATCGTGCATCACTTTAGCAAGGTGGCCCGATTACCGAGGCTGAAGCAGTTGAGCAGAGATCTTCTTCTGGATATCCTGGAAGCCCTGGCGGACGAGCAGAGCGAGGCCCGGACCTGTCAGGATATGTCTAGCGATTGCTGA
- Protein Sequence
- MDSMATAECLTLDFGPFETVHRWQRMPECDEFVGARRSKHTVVAYKDAIYVFGGDNGIRMLNDLLRFDTKETSWGTAIATGAPPAPRYHHSAVVHNSSMFVFGGYTGDIHSNSNLTNKNDLFEYKFQTGQWIEWKFIGKTPVARSAHGAAIYDNKLWIFAGYDGNVRLNDMWTISLSPEEPRIWKEVVQSGECPPTCCNFPVAVARESMFVFSGQSGAKITNSLFQFHFREKRWTRISTEHILRGAPPPPARRYGHTMVAFDRHLYVFGGTADSTLPNDLHSYDLDTQTWNVVLPSSSSQVPSGRLFHAAAVIGEAMFIFGGTVDNNVRSGETYRFQFSSYPKCTLHDDFGKLLNSRLFCDVEFVVGEQESETKIPAHVAMVAARSEYLSARIKHARERREKSAEGESPLLEVKLEDVVPEAFQMVLNYIYTDRIDPTKRSDDPEPGNRIVLLTMDVYRLAVQFNMARLEQLCVHYLEATISHANVLVALHNAAHLNLHFIKEICLGFVVKETNYNQIVMSQEFETLEQPLMVEVIRRRQMPQARNFTKQYEPGTGTTLEQDMEAFLKNVGRELCDITLMLDGTPIPAHKAVLAARCSYFEAMFRSFMPENNTVNIQIGEMIPSSESFASLLRYIYYADVSMPPEDSLYLFTAPVFYGFTNNRLQTFCKQNLEMNVTFENVIQILEAADRMQAADMKTYALNLIVHHFSKVARLPRLKQLSRDLLLDILEALADEQSEARTCQDMSSDC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00087267;
- 90% Identity
- iTF_01056144;
- 80% Identity
- -