Ocos005807.1
Basic Information
- Insect
- Ophion costatus
- Gene Symbol
- ttk
- Assembly
- GCA_951751655.1
- Location
- OX632357.1:20236544-20241758[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.4e-09 3.8e-06 27.1 0.0 7 40 360 393 354 396 0.89
Sequence Information
- Coding Sequence
- ATGATGGGAGCTTCAGATCGTTACTGTCTGCGATGGAACAATCATCAGGCAAACTTGCTCTCGGTGATGGACGACCTGCTGAAGAATCAAACGCTAACGGACGTGACGCTGGGCGTCGAGGACGGTCGTTTTCTCAAATGTCACAAGGTCATACTGGCTACTTGTTCGCCGTACTTTCGTACCCTCTTCATCGAGGTGCCGACCAACCATCCGATAGTCCTTCTCAAGGACGTCAGATACACGGAGGTCAAGGCGATACTGGAGTTCATATACAGGGGCGAGGTGAGCGTCGCTTACGACGATTTGGGGGCGTTGTTCCAAGTCGCCGAGTTACTGCAGGTCAAGGGTCTCGTGGCCAGCAACGAGTTGTCTTCGGGAAACGAAGCAACGGCACCTCCATCACCAACGGTCTGCAGCACCAGCAGCAATCGCAACGACGAACCTGCGCATACTTCCGAGAGTGTACAATCGAATGCCAGTCGGCAACAATCGGCAAGTGCCCCTATTTCCAGCAGCGCTGGAGCCTCCAGTCATCAAGATGTCCCGGAGCCAACGATTCCCGCACCCGCCTGGCCAATGCCCCAACTCTTTTCAACCGACGAACAAAAGTCCGCGGTCGCTGCTCTCGCCAACTTTCATCCCTTTCTGCCCACGCAAGCCTTTCCCTTTGCCCAATTTCGCGACAACGTTGCCCAAGCTTCGACCGCCCGGATCCCCAGAGCCGGCGCGTCCAACAACGGGACGACCCACCATCCGGACCCATCGATACTCAGGGCAGTTCTCAATCCGGAACACGATGACGGTATCAGAATACCGATCATTCACCAAGACTCCCAGAGCCGCAATCGCCGCAATCGAACAACCAACAGAGATGACAGACGAGGCAGCGTGGACTTGTCGCACAGCCAGGGAGCTCCGAGCCCCCGCGAGCACGAGGCCTCCATGATGGACGACGAGGACAAGAGAGAGAATCCTCAAACTTTCGCGGATGATGCGAAATACGGTGTCGGGGCTTACGCAACGTCCCAGAGGCAAGAGATCAAGCGTTACAAGAAGTACTCGAGAAAGGACATATGGGACGCTATCGCAGCCGTGAAAGGAGGCCTGAGCGCGAACAAAGCTGCCGAACTGTTCAGCGTACCATCAAGAACCCTTTACGACAAGATTAAAAAGCTCGGCATACCCCCGACGAAGCACCGACGAAGCGAAAATGCGACGACTTCTGGCGGCCTGCAATACGATATCGCCGGTAACGTCAGCAACGCCGGATTGGAAAGCACGACGAAAAATACAAGCGACGACCTCAATGACACGATCGAAAATCCAGCATCAGCCGTCGAGACTGCCTACACCGAAAATCGGGAAAAATCGGCCGATCCCGAAGACACGATAGACGCCACTCGCCAAAGTCCACGCCCCCGCATTCATCGCGACACTTCTCACTCCCGATCGTCCAACGAATCGCAATTTAAGGACGACGAGAACGAGGCCGAGGATCTTACAGTAAACCGTAGGTCCAACGTTCACGTTATTTTTTCGGCCAACAGCGCTATTCAAGAAACGGCCTAG
- Protein Sequence
- MMGASDRYCLRWNNHQANLLSVMDDLLKNQTLTDVTLGVEDGRFLKCHKVILATCSPYFRTLFIEVPTNHPIVLLKDVRYTEVKAILEFIYRGEVSVAYDDLGALFQVAELLQVKGLVASNELSSGNEATAPPSPTVCSTSSNRNDEPAHTSESVQSNASRQQSASAPISSSAGASSHQDVPEPTIPAPAWPMPQLFSTDEQKSAVAALANFHPFLPTQAFPFAQFRDNVAQASTARIPRAGASNNGTTHHPDPSILRAVLNPEHDDGIRIPIIHQDSQSRNRRNRTTNRDDRRGSVDLSHSQGAPSPREHEASMMDDEDKRENPQTFADDAKYGVGAYATSQRQEIKRYKKYSRKDIWDAIAAVKGGLSANKAAELFSVPSRTLYDKIKKLGIPPTKHRRSENATTSGGLQYDIAGNVSNAGLESTTKNTSDDLNDTIENPASAVETAYTENREKSADPEDTIDATRQSPRPRIHRDTSHSRSSNESQFKDDENEAEDLTVNRRSNVHVIFSANSAIQETA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01100738; iTF_01102192; iTF_01101975; iTF_01102935; iTF_01102715; iTF_01101469; iTF_01101248; iTF_01103474; iTF_01103681;
- 90% Identity
- iTF_01100738; iTF_01102192; iTF_01101975; iTF_01102935; iTF_01102715; iTF_01101469; iTF_01101248;
- 80% Identity
- iTF_01100738;