Oobs029112.1
Basic Information
- Insect
- Ophion obscuratus
- Gene Symbol
- ttk
- Assembly
- GCA_964007375.1
- Location
- OZ023321.1:23841308-23847879[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.2 6e+03 -1.8 0.0 21 33 173 185 170 185 0.88 2 2 4e-09 5.7e-06 27.1 0.0 7 40 360 393 354 396 0.89
Sequence Information
- Coding Sequence
- ATGGGAGCTTCAGATCGTTACTGTCTGCGATGGAACAATCATCAGGCAAACTTGCTCTCGGTGATGGACGACCTGTTGAAGAATCAGACGTTAACGGACGTGACGCTGGGCGTCGAGGACGGTCGTTTTCTCAAATGTCACAAGGTCATATTGGCGACTTGTTCGCCGTACTTTCGTACCCTCTTCATCGAGGTGCCGACCAATCATCCGATAATTCTTCTCAAGGACGTGAGATACACGGAGGTGAAGGCGATACTGGAGTTCATGTACAGGGGCGAGGTGAGCGTCGCTTACGACGATTTGGGGGCGTTGTTCCAAGTCGCCGAGTTACTGCAGGTCAAGGGCCTCGTGGCGAGCAACGAGTTGTCCTCGGGCAACGAAGCAACATCACCTCCATCATCGACTGTCTGCAGTACCAGCAGCAATCGCAACGACGAACCTCCACCAACTTCCGAGAGTGTACGTTCAAATGCCAGTCGGCCACATTCGGCAAGTGCCCCCATTTCCAGTAACCCTAGAGCCTCCAGTCATCAAGATGTCCCGGAGCCAACGTTTCCTCCACCCGCCTGGCCAATGCCCCAACTCTTTCCAACCGACGAACAAAAGTCAGCGGTCGCTGCTCTCGCCAACTTTCATCCATTTCTACCCACGCAAGCCTTTCCCTTTTCCCAATTCCGCGACAACGTTTCCGAATCTTCGGGTGCCCGGATTCCCAGAGCCGGCGCGTCCACCAACAACGGATCGACCCATCATCAGGACCCATCGATACTCAGGGCAGTTCTCAATCCGGAACACGATGACGGAATTAGAATACCGATGATTCGCCAAGACTCCCAGAGTCGCAATCGCCGCAATCGATCCGCCAACAAAGATGACAGACGAGGCAGCATGGACTTGTCGCACAGCCAAGGAGCTCCCAGCCCCCGCGAGCATGAGGCCTCCATGATGGACGATGAGGACAAGAGAGAGAATCCTCAGACTTTCCCGGATGATGCGAAATACGGCGTCGGGGCTTACGGAACGTCCCAAAGGCAAGAGATCAAGCGTTACAAGAAGTACTCGAGAAAGGACATATGGGACGCTATCGCAGCCGTGAAAGGAGGCCTGAGCGCGAACAAAGCCGCCGAACTGTTCAGCGTACCATCGAGAACCCTTTACGACAAGATTAAGAAGCTCGGCATACCCCCGACGAAGCACCGACGAAGCGAGAACGCGACGAATTCCGGAGGCCTGCAATACGATATCGCCGGTAACGTTAGCAACGCCGGATTGGAAAGCACGATGAGAAATACGAGCGAAGACTTCAATGACCCGATCGAAAATCCAGCATCAGCCGTCGAGACTGCCTACACCGAAAATCGGGAAAAATCCACCGATCCCGAGGACACGATAGAGGCCACTCGCCAAAGTCCACACCCGCCCATTCATCGCGACAATTCTCACTCCCGATCGTCCAACGAATCGCAATTTAAGGACGACGAGAACGAGGCCGAGGATCTTACAGTAAACCGTAGGTCCAATGTTCACGTTATTGTTACGGCCAACAGCGCTATTCAAGAAACGGCCTAG
- Protein Sequence
- MGASDRYCLRWNNHQANLLSVMDDLLKNQTLTDVTLGVEDGRFLKCHKVILATCSPYFRTLFIEVPTNHPIILLKDVRYTEVKAILEFMYRGEVSVAYDDLGALFQVAELLQVKGLVASNELSSGNEATSPPSSTVCSTSSNRNDEPPPTSESVRSNASRPHSASAPISSNPRASSHQDVPEPTFPPPAWPMPQLFPTDEQKSAVAALANFHPFLPTQAFPFSQFRDNVSESSGARIPRAGASTNNGSTHHQDPSILRAVLNPEHDDGIRIPMIRQDSQSRNRRNRSANKDDRRGSMDLSHSQGAPSPREHEASMMDDEDKRENPQTFPDDAKYGVGAYGTSQRQEIKRYKKYSRKDIWDAIAAVKGGLSANKAAELFSVPSRTLYDKIKKLGIPPTKHRRSENATNSGGLQYDIAGNVSNAGLESTMRNTSEDFNDPIENPASAVETAYTENREKSTDPEDTIEATRQSPHPPIHRDNSHSRSSNESQFKDDENEAEDLTVNRRSNVHVIVTANSAIQETA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01100509;
- 90% Identity
- iTF_01100509;
- 80% Identity
- iTF_01102935;