Olut022788.1
Basic Information
- Insect
- Ophion luteus
- Gene Symbol
- ttk
- Assembly
- GCA_944452655.1
- Location
- CALYBV010003378.1:36279-42748[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5 2.5e+03 -1.1 0.0 20 33 172 185 170 186 0.89 2 2 2.4e-09 3.9e-06 27.1 0.0 7 40 360 393 354 396 0.89
Sequence Information
- Coding Sequence
- ATGGGAGCTTCAGATCGTTACTGTCTGCGATGGAACAATCATCAAGCAAACTTGCTCTCGGTGATGGACGACCTGTTGAAGAATCAGACGTTAACGGACGTGACGCTGGGCGTCGAGGACGGTCGTTTTCTCAAATGTCACAAGGTCATATTGGCGACTTGTTCGCCGTACTTTCGTACCCTCTTCATCGAGGTGCCGACCAATCATCCGATAATCCTTCTCAAGGACGTGAGATACACGGAGGTGAAGGCGATACTGGAGTTCATGTACAGGGGCGAGGTGAGCGTCGCTTACGACGATTTGGGGGCGTTGTTCCAAGTCGCCGAGTTACTGCAGGTCAAGGGCCTCGTGGCGAGCAACGAGTTGTCTTCGGGAAACCAAGCAACATCACCTCCATCACCGACTGTCTGCAGTACCAGCAGCAATCGCAACGACGAAGCTCCACCGACTTCCGAGAGTGTGCGATCGAATTCCAGTCGGCCACATTCGGCAAGTGCACCCATTTCCACTAACGCTAGAGCCTCCAGTCATCAAGATGTCCCGGAGCCAACGATTCCTGCACCCGCCTGGCCAATGCCCCAACTCTTTCCAACCGACGAACAGAAATCAGCGGTCGCTGCTCTCGCCAACTTTCATCCCTTTCTACCCACGCAAGCCTTTCCCTTTTCCCAATTCCGCGACAACGTTTCCGAATCTTCGGGTGCCCGGATTCCCAGAGCTGGCGCCTCCACCAACAACGGATCGACCCATCATCAGGACCCATCGATACTCAGGGCAGTTCTCAATCCGGAACACGATGACGGAATTAGAATACCGATGATTCGCCAAGACTCTCAGAGTCGCAATCGCCGCAATCGATCCACCAACAAAGATGACAGACGAGGCAGCATGGACTTGTCGCACAGCCAAGGAGCTCCCAGCCCCCGCGAGCACGAGGCCTCCATGATGGACGATGAGGACAAGAGAGAGAAACCTCAGACTTTCCCGGATGATGCGAAATACGGAGTCGGGGCTTACGGAACGTCCCAAAGGCAAGAGATCAAGCGTTACAAGAAGTACTCGAGAAAGGACATATGGGACGCTATCGCAGCCGTGAAAGGAGGCCTGAGCGCGAACAAAGCCGCCGAACTGTTCAGCGTACCATCGAGAACCCTTTACGACAAGATTAAGAAGCTCGGCATACCCCCGACGAAGCACCGACGAAGCGAGAATGCGACGAATTCCGGAGGCCTTCAATACGATATCGCCGGTAACATTAGCAACGCCGGATTGGAAAGCACGATGAAAAATACGAGCGAAGACTTCAATGACCCGATCGAAGATCCAGCATCAGCCGTCGAGACTGCCTACACCGAAAATCGGGAAAAATCCACCGATCCCGAGGACACGATAGACGCCACTCGCCAAAGTCCACGCCCGCCCATTCATCGCGACAATTCTCACTCCCGATCGTCCAACGAATCGCAATTTAAGGACGACGAGAACGAGGCGGAGGATCTTACAGTAAACCGTAGGTCCAATGTTCACGTTATTGTTTCGGCCAACAACGCTATTCAAGAAACGGCCTAA
- Protein Sequence
- MGASDRYCLRWNNHQANLLSVMDDLLKNQTLTDVTLGVEDGRFLKCHKVILATCSPYFRTLFIEVPTNHPIILLKDVRYTEVKAILEFMYRGEVSVAYDDLGALFQVAELLQVKGLVASNELSSGNQATSPPSPTVCSTSSNRNDEAPPTSESVRSNSSRPHSASAPISTNARASSHQDVPEPTIPAPAWPMPQLFPTDEQKSAVAALANFHPFLPTQAFPFSQFRDNVSESSGARIPRAGASTNNGSTHHQDPSILRAVLNPEHDDGIRIPMIRQDSQSRNRRNRSTNKDDRRGSMDLSHSQGAPSPREHEASMMDDEDKREKPQTFPDDAKYGVGAYGTSQRQEIKRYKKYSRKDIWDAIAAVKGGLSANKAAELFSVPSRTLYDKIKKLGIPPTKHRRSENATNSGGLQYDIAGNISNAGLESTMKNTSEDFNDPIEDPASAVETAYTENREKSTDPEDTIDATRQSPRPPIHRDNSHSRSSNESQFKDDENEAEDLTVNRRSNVHVIVSANNAIQETA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01100509;
- 90% Identity
- iTF_01100509;
- 80% Identity
- iTF_01102192;