Obir008109.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ooceraea biroi
Gene Symbol
Hr39
Assembly
GCA_003672135.1
Location
NC:15943083-15968045[-]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 2 1.1e+04 -5.4 6.2 130 166 37 73 20 104 0.58
2 5 2 1.1e+04 -5.8 9.5 76 163 286 397 228 415 0.56
3 5 2 1.1e+04 -6.8 11.4 70 160 432 525 406 542 0.59
4 5 2.6e-08 0.00015 20.7 0.1 1 23 608 630 608 678 0.84
5 5 5.8e-70 3.3e-66 223.7 0.0 201 408 789 997 743 997 0.92

Sequence Information

Coding Sequence
ATGTCGGAGCAAAACGGGCCCAGCGAGGGCCCAGGACCAGGGCCCGGCTCGGAATCGGGCTGGTGGCCGTCCACGCAGACCTGGAAATCGTCAGCGGCCGCCACGTCGTCGACCTCATCCGCGACCTCGACCGCGGCGGCGGGTTCCGCGTCCGTTTCCGTCTCCTGCGCCGCATCCGGCTCGTCCACGACGAGCTCCTCCACCTCGACCAACTCGTCCGCGAATTGCTGTCCCTCATCATGCATCGGCGTTTCCTGCACGATGAGTCCGAGCCGTTCCACGGAGACGGGGAAAAACGTGTCTGTCACTGCTATTAATGTACCGCCCAATCAAGAGATGCACGATGGTAAAGGGGTGTGTAAATATCTCGGGGGACAGAATGGCGTTACGGTGTCGGTAGTATCGACTTCAGTATTGGGGTGCGGGAACGCAAACGCCGTACCGCCTAGCGGACTTTGTGCAAACACGGGGCCGCATAGTATCGGCATCGGAATCGGCGGCATCCTCGCCGCGAATGCAGCCGACATCGACGACCCCGAGGACAGCGACGGCGAGATCAGCAAGATCGATTTTAGAGGGGTCAATCTGCGCTCGAAGAAGAAACGCGATGTATCGGGGAATCAGAACGGCGACAAGATCGCCGACGGAGATGCTAACGGCGACGGCGGGGGATGTTGCGACGATAACTCGCAACAGCAACCCGAGAGACCTATGTCTTGGGAAGGAGAGCTGTCGGATCAAGAAATGTCTTCCAATACAATCACTAATCAGGACCATCACGAGGAAACGTCCATGGAAGGAGTTCAGGTGTGCAGCACGAGTCCCGGACCCATGGAGCAAAAGTTCCCGATCAAGTCGGAGCCGGATTTCCGGTCCAGCCCGGGTTTCACGATCGGATCGTTTCACGATGCCGGTCTATCCATGACGCACAACCAACAgctgcagcaacagcagcagcagcagcgcgGTATCGAGAATCTCGAGCAGACTCAACAGAGCGACCTGCCGCTTCTTGTAGGCAAACTTCTCGGCGGATACAACAGCTCGACGCCTAATCACAGTCCCGTTCTTAATCCGCGGCATCATCTGACTAAACACAGTCATACGAGGTCACAGGTGCCGTCACCAGATTCCGCCATTCATTCCGCGTACAGCGTCTTCAGTTCGCCGACGCAGAGTCCGCACGCGGCGCGGCACTCCGCGCTAGGAGCGGGCAGCCCGATACCGTCGTCTTCGCTGTCCCTATCTCGTCACAGCTTCAACAACTCGACTTCGTCGCTGTCCCTGTCGCTGTCGCATTCGCTCTCGAGGAACAACTCCGACGCTTCCAGCAGTTGCTACAGTTACGGTTCGCTCAGCCCACCCACGCACTCGCCCGTCCAGCAACCGAGACATCCGCACTCGCACTCGCAACATCATCAGCATCAAGTGGCGCAGAGCAGTCCGCTGCACTTGCCGGCCTCGTCCGCGGTCCCGGGGCATTACTCGTCTTCATCCGTGCCCGGTTCGGAACTGTCCCCGGAAGGTCATACGGTTGTGGAAGATCAGGAAGACTGCAGGATACCGTCGGCGCCGTCCGGTATCTCCACGCGGCAGCAACTAATTAATAGTCCTTGTCCGATTTGCGGCGACAAGATAAGCGGCTTCCATTACGGGATTTTCTCGTGCGAGTCGTGCAAGGGTTTCTTCAAGCGCACCGTCCAGAACCGGAAAAATTACGTGTGCCTTAGAGGCGCGGGTTGCCCGGTCACCGTGGCTACGAGGAAGAAGTGCCCGGCTTGTCGCTTCGACAAGTGCCTGCATATGGGTATGAAACTCGAGGCGATCAGGGAGGATCGCACGAGGGGTGGTAGAAGCACCTATCAGTGCACTTACACCTTGCCGGCAAATCTCGTCGGCAGTCCGGCCGGTATGGCCAGCGAGAAACTTACGGCGGCGGGCAACTGCAGCCCGGCGCCGGCCGGAAGCGAGCACCACTATTCTGCTCGGCACCACTCGAATCACTCCCACAAGATGCAGGTGGTACCGCAGCTCTTGCAGGACATCATGGACGTGGAGCACCTCTGGCATTACAACGACAACGATCGGATAAGCGGTGGTGCGTCTGGCAATACGAGGAACGCCGGCGGCATCGACGGCGTACTGATAGGTGGGTCCGGAAGTGGCCCGGTATCGATCGGCGGTACCGGAAGTGCGGTCGGTCTCGGGAACAACGTGGCTGCGGATTGTCCGTCGAACGAGTCCAACAACATTGATAGCAACAACAGAAGGGGCGACTCGGCGAGCCCACCCGGCACAGCTGCTACCGCAGCGGTCGATCAGCGTTCCACGAACGGCAACACCACGAATAACGGTAATTCCCAGATCGCCAGTAACTCGAACGGCAATCCTACGCAACACCCGGACTTCTTGTCCAATCTCTGCAACATTGCGGATCATCGGCTCTACAAGATAGTCAAGTGGTGCAAGAGCTTGCCGCTCTTCAAGAACATCTCGATCGACGATCAAACCTGCCTACTGATCAACTCGTGGTGCGAGCTACTGCTGTTCTCGTGCTGCTTTCGCAGCATGAGCACCCCCGGTGAAATAAGGGTGTCTCTCGGCAAGTCGATTACCCTGGAGCAGGCCAAGCAGCTCGGCCTAGCGACCTGCATCGAGAGGATGCTCGCTTTCACCAACAATCTGCGAAGGCTGAGAGTAGACCAATACGAATACGTTGCAATGAAGGTGATCGTGCTGCTAACGTCCGACACGAGCGAACTCAAGGAGCCCGAGAAGGTCAGAGCTTCCCAGGAGAAAGCCCTTCAAGCGCTACAGCAATACACGATCGCGAGGTACCCGGAAATGCCGGCCAAATTCGGTGAATTGCTGTTGAGAATTCCGGATCTGCAGAGAACGTGCCAAGCGGGGAAAGAATTGCTTAGTGCGAAACGCGCCGAGGGGGAGGGCAGCTCGTTTAATCTTCTGATGGAGTTGTTGAGAGGGGATCATTGA
Protein Sequence
MSEQNGPSEGPGPGPGSESGWWPSTQTWKSSAAATSSTSSATSTAAAGSASVSVSCAASGSSTTSSSTSTNSSANCCPSSCIGVSCTMSPSRSTETGKNVSVTAINVPPNQEMHDGKGVCKYLGGQNGVTVSVVSTSVLGCGNANAVPPSGLCANTGPHSIGIGIGGILAANAADIDDPEDSDGEISKIDFRGVNLRSKKKRDVSGNQNGDKIADGDANGDGGGCCDDNSQQQPERPMSWEGELSDQEMSSNTITNQDHHEETSMEGVQVCSTSPGPMEQKFPIKSEPDFRSSPGFTIGSFHDAGLSMTHNQQLQQQQQQQRGIENLEQTQQSDLPLLVGKLLGGYNSSTPNHSPVLNPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGAGSPIPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHPHSHSQHHQHQVAQSSPLHLPASSAVPGHYSSSSVPGSELSPEGHTVVEDQEDCRIPSAPSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLHMGMKLEAIREDRTRGGRSTYQCTYTLPANLVGSPAGMASEKLTAAGNCSPAPAGSEHHYSARHHSNHSHKMQVVPQLLQDIMDVEHLWHYNDNDRISGGASGNTRNAGGIDGVLIGGSGSGPVSIGGTGSAVGLGNNVAADCPSNESNNIDSNNRRGDSASPPGTAATAAVDQRSTNGNTTNNGNSQIASNSNGNPTQHPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQTCLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQAKQLGLATCIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIARYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01267641;
90% Identity
iTF_00885153;
80% Identity
iTF_01099305;