Basic Information

Insect: Oligia strigilis
Gene Symbol: -
Assembly: GCA_951800025.1
Location: OX637566.1:12557779-12561099[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00063 0.06 14.8 4.0 2 23 194 215 193 215 0.96

2 16 1 98 4.7 0.4 2 23 219 240 218 240 0.94

3 16 0.039 3.7 9.2 2.7 2 23 326 348 325 348 0.96

4 16 0.00021 0.02 16.3 0.5 1 23 354 377 354 377 0.97

5 16 0.035 3.3 9.3 0.1 1 20 381 400 381 402 0.94

6 16 0.00042 0.04 15.4 0.5 1 23 410 433 410 433 0.96

7 16 1 99 4.7 1.0 1 23 438 461 438 461 0.85

8 16 0.00011 0.011 17.2 0.1 2 23 474 495 473 495 0.97

9 16 0.0087 0.83 11.2 1.6 1 23 501 523 501 523 0.98

10 16 0.24 23 6.7 1.9 2 23 529 549 529 549 0.96

11 16 0.00037 0.035 15.6 1.0 2 23 555 576 555 576 0.97

12 16 0.048 4.6 8.9 0.1 2 23 581 601 580 601 0.95

13 16 3e-05 0.0029 19.0 3.1 1 23 648 670 648 670 0.98

14 16 0.0033 0.32 12.5 2.0 3 23 677 697 676 697 0.97

15 16 0.0015 0.15 13.6 0.8 1 23 703 726 703 726 0.93

16 16 0.0024 0.23 13.0 0.4 1 23 731 754 731 754 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00063	0.06	14.8	4.0	2	23	194	215	193	215	0.96
2	16	1	98	4.7	0.4	2	23	219	240	218	240	0.94
3	16	0.039	3.7	9.2	2.7	2	23	326	348	325	348	0.96
4	16	0.00021	0.02	16.3	0.5	1	23	354	377	354	377	0.97
5	16	0.035	3.3	9.3	0.1	1	20	381	400	381	402	0.94
6	16	0.00042	0.04	15.4	0.5	1	23	410	433	410	433	0.96
7	16	1	99	4.7	1.0	1	23	438	461	438	461	0.85
8	16	0.00011	0.011	17.2	0.1	2	23	474	495	473	495	0.97
9	16	0.0087	0.83	11.2	1.6	1	23	501	523	501	523	0.98
10	16	0.24	23	6.7	1.9	2	23	529	549	529	549	0.96
11	16	0.00037	0.035	15.6	1.0	2	23	555	576	555	576	0.97
12	16	0.048	4.6	8.9	0.1	2	23	581	601	580	601	0.95
13	16	3e-05	0.0029	19.0	3.1	1	23	648	670	648	670	0.98
14	16	0.0033	0.32	12.5	2.0	3	23	677	697	676	697	0.97
15	16	0.0015	0.15	13.6	0.8	1	23	703	726	703	726	0.93
16	16	0.0024	0.23	13.0	0.4	1	23	731	754	731	754	0.96

Sequence Information

Coding Sequence: ATGGACAGTTTCAAGTCGAAACTCAAAGATGTCCTTCACAGTACAAAGTATTGCGGGATATGCTTGGAAAGTGACGATAATATGAGCACCGTTAACGAAAACCTGGAGGTCATTGTGAAAGAACAGACTCGCACGAAAACTTTGAAGGCTATCATTGATGTAGTGTTTACAGAGACTAATTACAGCCTAGCAAGTTCACTCATATGCAACAGTTGTATGGAAAAATTGATTCAGTCATACATTTTCATAGAAAATGCAAAGAAAACATCCAAGATTTTAGACAACTATGTCAACGATTTGTTTAGCAAATCAGACGATATTTTCAATCATTTGCCGGAGTCATGCATTGAAAGTACAAATGTTGTTATTGTATTAGAAAATAATATCCATGATCTTCCTGAAAACAGGGAAAGCAAAGATGAGTTTAACAAAATTGCTGAAGAAAATAATGAAATCTTTAAGGTGAAAAAAGAATTAGCTCCAAAAAGAAAGAGAATCAAATGTGCAAAATGTCTGGTATTGCTACCCTCGCTCAGAGCTTTAAAAATGCATAGAATGAAATGTAAGAAGCTGATATTACAATGTAGACTGTGTTTTAAgacatttaatgataaacaacatttaaatgtaCATTACAAACTGCATTTGAAAGTGAAATGCAAATATTGTCCTGAAATACTTCTTAAAAAGGGATTGCTGGAACATCTTAAAACTAAACATGGAGATTCTTTACTCAAATGTTTAAAATGTGAACTGTTTTACTCCTTAAAAACTTATCAAACTCACACTAAAGTCTGCcaacaaataaaagaagaaaaaccTCAATGCTTGATGTGTCTTAAGGTCTATACTGAAACAGAATTTAAGTCCCATACTTGCAGGTACAGCTGCCCAGAATGTACCGAAATACCTtgcatgcattataaatatttgaAGTCTTATCGGGAACAGACTTTACACAACGCAGGCAAATCCAAATGTGTCGACTGTGACTATCTATGTACAAGGAAAGAGCATCTACTCGGACATGTGAATAAGGTCCATTTAAACAATCATCCATATATCTGTGATAAATGCGGACAACAGTTTTATTCTAAAGTAGTTTTAAAAGCTCATATTCTTAGGTTCCATGAGAACTGTTTTGTGTGCCAGTATTGTGATtcagattttagtaatattaacaATTACGAAAGTCATGTAATAGCATGTGAAGATATCAAAAGGAAGTTTGCTTGTGACAATTGTCCAGCCTCTTTCGATTCCTCTAACAGTTTGATGAACCATAGACAACGTAGACATAGCGTGGATATTTTTCCATGTGGgctttgcaataaaaagttcctGAAAGATTCTAAAAGGAAAGAGCATATGGTTAAAGTACATAGCAGTCTCCGAATTAAGAAGCTGGATAAAAATATAGAATGTGTTGTGTGTCAAGAAAAGTTTGATAACAAAGGAGAATTGGTGCAGCATATGAAATCTCATGGTCCACACACTACATATCCATGCAGGATATGCAATACAGAGTATCAGACTTTGAGGCAGTTTCGAGCACATAATCGCAAACACAACGGACCATTTGCAACATGCCATGTTTGTGGTAAAGAAATGAGAGAAATCCTGCTGAAAAAACATCTGACTACTCACTCTGATGCTGTAGAAACATGTGAGACTTGTGGCAGGTCTTTTCAAAACATCACTTTATTAAAGTACCACCAGAAAATTCATCTAGAAAGTGTCCCATGTCCTAAGTGTAAAAAAATGATCAACCCAGCCAGACTACGCAGGCATTGGAGAGGACATCTAATGGAAGAGAATCCTACTCAAAAAGGAGTTAGGAAACAACAACCAAACTTGAAATGTGACCTATGTGAGTATAAGACATGGAACAACACCCTTCTAGAATGTCATAGGAACCGCCATCATTTGAAAATAAAGCCATACGTCTGCCACATATGCAGCAAAGACTTCATTGGAAAACATTTGCTGAAAAAGCATATTGAAACGCATGACACGAAAAGCGTTGCCTGTATGGTATGCCTGAAGAGTTTTGCCAATTCGACTTGCTTGAAAATGCATTTGCGGCTACACACAGGTGAGAAGCCTTTCACTTGTGACATATGTGGGGAGCGATTCAGGTCATCCAGCATTATGAATGTACACAAGTTAAAGAAGCATTCTGGTAAGAGTTACATTTGCCCATTGTGTTCAAATAAGTTTTATACTGTAAGGGATttgcgaagacatgtgattaaAGTCCATTGGAAGCAGAAAAATAAGAGGTTCGACCCTCGAGAGTTGAAAGGGCTGGATAAAGAACATTATCATTTGTTTCATGATGGTAGAAGAGTCAAAGTTGCTGATgaagatgttgatttttataTGCCCTGTTGA
Protein Sequence: MDSFKSKLKDVLHSTKYCGICLESDDNMSTVNENLEVIVKEQTRTKTLKAIIDVVFTETNYSLASSLICNSCMEKLIQSYIFIENAKKTSKILDNYVNDLFSKSDDIFNHLPESCIESTNVVIVLENNIHDLPENRESKDEFNKIAEENNEIFKVKKELAPKRKRIKCAKCLVLLPSLRALKMHRMKCKKLILQCRLCFKTFNDKQHLNVHYKLHLKVKCKYCPEILLKKGLLEHLKTKHGDSLLKCLKCELFYSLKTYQTHTKVCQQIKEEKPQCLMCLKVYTETEFKSHTCRYSCPECTEIPCMHYKYLKSYREQTLHNAGKSKCVDCDYLCTRKEHLLGHVNKVHLNNHPYICDKCGQQFYSKVVLKAHILRFHENCFVCQYCDSDFSNINNYESHVIACEDIKRKFACDNCPASFDSSNSLMNHRQRRHSVDIFPCGLCNKKFLKDSKRKEHMVKVHSSLRIKKLDKNIECVVCQEKFDNKGELVQHMKSHGPHTTYPCRICNTEYQTLRQFRAHNRKHNGPFATCHVCGKEMREILLKKHLTTHSDAVETCETCGRSFQNITLLKYHQKIHLESVPCPKCKKMINPARLRRHWRGHLMEENPTQKGVRKQQPNLKCDLCEYKTWNNTLLECHRNRHHLKIKPYVCHICSKDFIGKHLLKKHIETHDTKSVACMVCLKSFANSTCLKMHLRLHTGEKPFTCDICGERFRSSSIMNVHKLKKHSGKSYICPLCSNKFYTVRDLRRHVIKVHWKQKNKRFDPRELKGLDKEHYHLFHDGRRVKVADEDVDFYMPC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01119684;
90% Identity: iTF_00122735;
80% Identity: -