Basic Information

Insect: Oligia strigilis
Gene Symbol: -
Assembly: GCA_951800025.1
Location: OX637567.1:8545742-8585433[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 2.2 2.1e+02 3.7 0.9 2 23 491 512 490 512 0.90

2 18 0.018 1.7 10.3 0.0 1 23 522 545 522 545 0.94

3 18 0.11 10 7.8 3.2 2 21 641 660 641 661 0.94

4 18 0.045 4.3 9.0 3.8 2 23 722 743 721 743 0.95

5 18 0.98 94 4.8 0.7 1 23 755 779 755 779 0.91

6 18 0.00019 0.018 16.5 0.5 2 23 786 809 785 809 0.97

7 18 0.28 27 6.5 0.4 1 23 815 837 815 837 0.93

8 18 0.0043 0.41 12.2 2.9 1 23 843 865 843 865 0.98

9 18 0.67 64 5.3 0.5 2 20 876 894 876 896 0.90

10 18 0.05 4.8 8.9 0.2 1 23 975 997 975 997 0.97

11 18 2.6 2.5e+02 3.4 7.2 1 23 1004 1026 1004 1026 0.95

12 18 0.0018 0.17 13.4 1.8 1 23 1070 1093 1070 1093 0.95

13 18 0.00063 0.06 14.8 0.5 1 23 1100 1123 1100 1123 0.98

14 18 0.0051 0.49 12.0 0.2 2 23 1145 1167 1144 1167 0.96

15 18 0.006 0.57 11.7 4.3 3 23 1193 1214 1192 1214 0.95

16 18 0.00039 0.037 15.5 1.2 1 23 1240 1262 1240 1262 0.96

17 18 0.00016 0.015 16.7 0.1 1 23 1268 1290 1268 1290 0.97

18 18 0.00049 0.047 15.2 0.7 3 23 1298 1319 1296 1319 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	2.2	2.1e+02	3.7	0.9	2	23	491	512	490	512	0.90
2	18	0.018	1.7	10.3	0.0	1	23	522	545	522	545	0.94
3	18	0.11	10	7.8	3.2	2	21	641	660	641	661	0.94
4	18	0.045	4.3	9.0	3.8	2	23	722	743	721	743	0.95
5	18	0.98	94	4.8	0.7	1	23	755	779	755	779	0.91
6	18	0.00019	0.018	16.5	0.5	2	23	786	809	785	809	0.97
7	18	0.28	27	6.5	0.4	1	23	815	837	815	837	0.93
8	18	0.0043	0.41	12.2	2.9	1	23	843	865	843	865	0.98
9	18	0.67	64	5.3	0.5	2	20	876	894	876	896	0.90
10	18	0.05	4.8	8.9	0.2	1	23	975	997	975	997	0.97
11	18	2.6	2.5e+02	3.4	7.2	1	23	1004	1026	1004	1026	0.95
12	18	0.0018	0.17	13.4	1.8	1	23	1070	1093	1070	1093	0.95
13	18	0.00063	0.06	14.8	0.5	1	23	1100	1123	1100	1123	0.98
14	18	0.0051	0.49	12.0	0.2	2	23	1145	1167	1144	1167	0.96
15	18	0.006	0.57	11.7	4.3	3	23	1193	1214	1192	1214	0.95
16	18	0.00039	0.037	15.5	1.2	1	23	1240	1262	1240	1262	0.96
17	18	0.00016	0.015	16.7	0.1	1	23	1268	1290	1268	1290	0.97
18	18	0.00049	0.047	15.2	0.7	3	23	1298	1319	1296	1319	0.95

Sequence Information

Coding Sequence: ATGACGGAGCCGCAACCACCATTGATCCTCTGCATGGAGAATGCGTCGGGAGAGGATGTGGCGCTCAGGATAGAACCAGATGATAACTTCCAGATGTTTCTGGATAAGGCCAGATCACTACTAGGATTCGATGTAGACATAAACTCGATAACCAGAAACCAGCCCGTTTCACTATCAGAAAACGTCTACCAATTTCTAGTAAACGCTGAACAAAACTTACAAGCAGACGAACTAACACAAAACTTTGACCAAATGTTGGATCCCAACGATGGAGCCAACGATTTGGTCTACATATTGGACGATGGCACACAAATCCGCGCCTCACAAATACATTTCGATAATGATGATCCTTTGGTTGATTTGACAGCCGAGAAAATACCATTTGTTAAATACGCTGATGATGTCACtgatgtagatgatgatgatataaataTTCACGAgactaaaaagattaatattgtTGATAGTCCTGTGTCGAGATGGTCAAGTAAAAATTCTAGCCCGAAATGCAGTTTTGTCAACTCTCTACCATTCAAATTAGTGTGCAATAATACGTCCGGATTCGAAGCGCAATTCACGAAATATTTAGAAGCGAATACAACAAAAACTTACGCTACCCTAAACCCGGTGACAACTCGAAATAAATCCCCAAAAAGTTTGATCAAAGATAATTTTAAGAACTACGATGATAACAGCTATCAGAGGAATGATAACTTGTCGTACACTCGGGAGGAGATTTTGAACATGTTTAAAGACTCCCCGATGACGTCACTGCCGTACGACCAAGGTTACAGTGAGAGGAGACATGTTCGGAAGACGGATCCTACGAGACTTGTTCATAAAAGTTGGAGTAAGCCTCTTTCTTACGTCGACATTGATGGGGTATTGATTGGGGAGAGCGAGAGCCAAATCtgttttatttgcggcaaacatgtggATAACAACGTGGATAAATTGTACCTTTTTGATAACGAAGACCAGCGGTTATATAGGTGTTCACCGCAGAAGAAAATGTCGACTCAGCTAAAAATTATCTGCGAATGTTGTCTCAACGAAAACTTCACACCATGTAGAATGAAAAGCGCAAATCAATTCTTGAATCCTGATGAATATCTCGTCATAAGAAACAATCAGCAATACATCTTccaaaaagttaaaaacttcAATTTCGCACACCTAGATAAAGCTAAAGAGATCATAAACAAGATAGAGAAGAAAATAGAGAAGGAAGAGTTTGTTAAAGTCGAAATTGGCTCTGATGGGGAAATTATAACCAAGCCCATAGACGCTAGGTCTGATGACATCATTACTGTTAAAGATGAGAAGAAGGAGGGTAGTTCGAGTGACGTAGAGATTGTAGAGCCGGAACCTGAGATAGATAATATCATAGACAATTTGGAGGAAGCTGATGAGGAGGTAAAAGAGTTTTTGGGAAAATATCAGCGTGATGATAGTGAAGTTACTGAGTTAAAATGCAGATTCTGTGAGCAAATCTTCTCGGATCTGGCAGCAGTAACAGATCACTGTGAAACGCATAAACATGACCTAGAAGATGGAGAAGTATTTCCTTGTGCACTCTGCAATTATGGTTATGCAAATTTAAAATGGCTAAAAGCTCATGTGAAGGCGGCCCACGAGAAGATTGAaacgttaaaaatattaaaagatgAAAATGAACCCGAGAAAGAGGAGAATAAAGACGATGTAAAGGCGGATGAAGTTAAGGCTGATTCTAAAACTGAGGTGCCGGAGCCACCCATCATAAAAACGGAGGTGAAGCAAGAATGCGTGGACAGCAGTGAGGATGAGATCTGGATCGTTCAGACTGCTGATGCCGAAGCCACACAGGAGCTGCAGAAACTACTCTGTAGTGCCAAGgTTAAAAAAGATGGGCAAGATGGTGAATCTGAAAACACACCTAAATGTTTTAATTGCGGTCAAATATTCGCGAACGCAGATTGCCTGTCAAACCATCGCTGTAGAAGACGCAACCAGAAGCGGAAATCCAAGGACAACCttatatgtatacctactgAGGAAGACTTCTTGAAGAGAGCTCAGGGTCGCCCTCGACCAGCTGATACGTCAGTAGACAGTGATCTACTTACTATGCGTTCCAAAAAACGCCGCAGCCGGGAACCGACCTCCAACCCTCAGGTAGTGACTTGCCACAACTGTAACGAGTCCTTCACGTCCAAAGTTAGACTCAAGTTTCATATGCAATTCCACGAAACATCAAACCAAGCCCGGTCCGACGGGCGCTACTCCTGCTCCGAGTGTGACGACGCCACCTTCGCCACGGAGACGGAACTCTTCGACCACGTGCACTTCCAGCACGACAAGCAGAAGAGGTGGCAATGTCCCGTCACGGGCTGCGGGAAGACCTTCTTCCTCAGGGCAACCCTTACAAAGCACAGTCGCACGCACACAGACACACGACGATACGTGTGCGTCACATGTAACAAGCGGTTTTTAGACAAACAGACGCTAGATGAACATGGAGTGACGCATTTACAGATAAAACCCTTCCAATGCCACATATGCCTGAAGCAGTTAACCCGTCGCTCGCGCTTGCGCATGCATGTGCGTGCGCATGAAGAGGAGTTGTCGCCGAGACTCGTGCGCGTCTGTGCGGTATGCACGAGGGCCTTTAGAGATCATCGGCATGCGCAGGAACACGCATCAAAGTCTACAGAATGTATTGAAGCTTTTGCGAACGAACTAAAAGAAGAAGCGGAAGAGGTGTCAGTACAATTGTCGCCCACCAGTGGACTTGTCAGACATACTGTGCAGATAATTGAATCTCCGAAGCTGTCAAAGCCGATCAAACGCCAAGTGTCGAATGAAATGGGCGAGCACCTTCTGTCTCAGTTGGCTGATGAAGCGCGCGCTTTGATAAGAGTGGTCGAGATTGAGAAGGCTTTCCGCTGCGAATATTGTGAAGATGTTTTCTATTTGGAGAGCGGTCTGAACACGCACCGCGCGATACATAAAGGAGTCAAAAATCCCTTCACTTGCCACATATGTAAAGTTAGCTTCGCGACTTATTCCAGATGCACAACCCACAAAACGACACACGGCTTCTACAAACGCTCGCTAGCTGacgctaagaagcaagccgacGGCCCCCCACAAGCTGACGCCGACTCCTCCGCCCGCTCAGCCACTGGCATACTAGGATACGGCGACTTTCCTGTCGTCAAACACTTCCTGTGCGAGGACTGTGGGCGTTCGTACCTACACTGGACGTACCTACAAGTACATAGACGCATGAAACACGCAAATGAAAACTTTCTGTACAAATGTAACCAGTGCGAGCTTACATTTCCTAACAGCTGGGGCCTGGCGTATCATCGCAAGAAGGTGCACTGCAAGTCTGGAGCTGACGACCCTGGAACCATCAATAAGAGCAACAGGGATGattatagGATACCGTGTCGGGATTGTGACCAGGTTCTGCCCAACAAAACAGCTTTATACAAACATCGGAAGAAAGAACACACCGATGGAACTGCACGGGCTTATTCTAAACCAGGAATGTATGCGAGTACAGAGTCAGAATCTACAGGCGGAGCGTGTCCCCATTGTCACGCCACGTTCACGCACGCGATTGATCTGCACAAACACGTCAAAGAAGTCCACGGCAAAGACGAGGAGTCTTGCCTATCCTGCAACAACAAGACATCGACCACAGAGGGGGCGTGTCCACGTCGTCCGCACGCGTGTCCCGTCTGCGGACACGCCTTTCGGACGCTCTCTATGCGGAACGAACATCTGAGGGTACATACTGGGGAGAGGCCCTTTCCTTGTGACGTCTGCGGAGTTGCGTTTAGGAGGTCCACAGCTATGCGGAACCACCGTCTGATCCACACCGGAGTGCGCGCGTGGGCGTGCGGGCGCTGTCCCAAGCGCTTCCGTATCCGCTCCGACCTGCGCACGCACCTGCGGCTCAAACATCCTGCTACTATTGTAGTTGTAGAGATGGAAGGCCTAAACCCATCGTCTGAAGAAGTACTGAAGGCGCTCGCTGCAGAAAACGTTCCACACGACAAGCTAATAGATATTACTAAGATGTCCTTCACGAAGGGCTCCACGAGCGTGATACCTTCGTGCGCGCGCGCACTGTCCGCTCTGAACAACGTGCCGCGCACACACGTCGCGTGCATCAAACCTACACCCGCACTGGAAGGTTTTCAACCGGCCCGTCGAGGTCGCGGCATCGCTAAAAACCCGCGGCGACCCAAGATACTACAGCGAGGGGAGGAGGAGCCACACGACCACTCTGCCTACCCCATCGTTGGTGGCGAGgagCTGTCAGATCTGAACGTCCTACTGCGGGACGGCGTGCTAGTCAACGGGAACCAAATGGTCCAGCTACAGTTGGATGACCCTATTCTGATGGAGTAG
Protein Sequence: MTEPQPPLILCMENASGEDVALRIEPDDNFQMFLDKARSLLGFDVDINSITRNQPVSLSENVYQFLVNAEQNLQADELTQNFDQMLDPNDGANDLVYILDDGTQIRASQIHFDNDDPLVDLTAEKIPFVKYADDVTDVDDDDINIHETKKINIVDSPVSRWSSKNSSPKCSFVNSLPFKLVCNNTSGFEAQFTKYLEANTTKTYATLNPVTTRNKSPKSLIKDNFKNYDDNSYQRNDNLSYTREEILNMFKDSPMTSLPYDQGYSERRHVRKTDPTRLVHKSWSKPLSYVDIDGVLIGESESQICFICGKHVDNNVDKLYLFDNEDQRLYRCSPQKKMSTQLKIICECCLNENFTPCRMKSANQFLNPDEYLVIRNNQQYIFQKVKNFNFAHLDKAKEIINKIEKKIEKEEFVKVEIGSDGEIITKPIDARSDDIITVKDEKKEGSSSDVEIVEPEPEIDNIIDNLEEADEEVKEFLGKYQRDDSEVTELKCRFCEQIFSDLAAVTDHCETHKHDLEDGEVFPCALCNYGYANLKWLKAHVKAAHEKIETLKILKDENEPEKEENKDDVKADEVKADSKTEVPEPPIIKTEVKQECVDSSEDEIWIVQTADAEATQELQKLLCSAKVKKDGQDGESENTPKCFNCGQIFANADCLSNHRCRRRNQKRKSKDNLICIPTEEDFLKRAQGRPRPADTSVDSDLLTMRSKKRRSREPTSNPQVVTCHNCNESFTSKVRLKFHMQFHETSNQARSDGRYSCSECDDATFATETELFDHVHFQHDKQKRWQCPVTGCGKTFFLRATLTKHSRTHTDTRRYVCVTCNKRFLDKQTLDEHGVTHLQIKPFQCHICLKQLTRRSRLRMHVRAHEEELSPRLVRVCAVCTRAFRDHRHAQEHASKSTECIEAFANELKEEAEEVSVQLSPTSGLVRHTVQIIESPKLSKPIKRQVSNEMGEHLLSQLADEARALIRVVEIEKAFRCEYCEDVFYLESGLNTHRAIHKGVKNPFTCHICKVSFATYSRCTTHKTTHGFYKRSLADAKKQADGPPQADADSSARSATGILGYGDFPVVKHFLCEDCGRSYLHWTYLQVHRRMKHANENFLYKCNQCELTFPNSWGLAYHRKKVHCKSGADDPGTINKSNRDDYRIPCRDCDQVLPNKTALYKHRKKEHTDGTARAYSKPGMYASTESESTGGACPHCHATFTHAIDLHKHVKEVHGKDEESCLSCNNKTSTTEGACPRRPHACPVCGHAFRTLSMRNEHLRVHTGERPFPCDVCGVAFRRSTAMRNHRLIHTGVRAWACGRCPKRFRIRSDLRTHLRLKHPATIVVVEMEGLNPSSEEVLKALAAENVPHDKLIDITKMSFTKGSTSVIPSCARALSALNNVPRTHVACIKPTPALEGFQPARRGRGIAKNPRRPKILQRGEEEPHDHSAYPIVGGEELSDLNVLLRDGVLVNGNQMVQLQLDDPILME

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00121732;
90% Identity: iTF_01247427;
80% Identity: -