Basic Information

Insect: Oligia strigilis
Gene Symbol: Znf296
Assembly: GCA_951800025.1
Location: OX637540.1:11890776-11919621[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00042 0.04 15.4 0.6 2 20 96 114 95 118 0.95

2 12 0.085 8.2 8.1 1.2 2 23 158 179 157 179 0.95

3 12 8.7 8.3e+02 1.8 0.2 2 23 256 278 255 278 0.87

4 12 0.0092 0.88 11.2 0.3 1 20 283 302 283 304 0.92

5 12 3.4e-05 0.0033 18.8 0.8 1 23 312 335 312 335 0.98

6 12 2.4e-05 0.0023 19.3 2.2 1 23 356 378 356 378 0.98

7 12 5.6e-06 0.00054 21.3 3.8 1 23 385 407 385 407 0.99

8 12 1.2e-07 1.1e-05 26.6 2.3 3 23 421 441 419 441 0.96

9 12 2.7e-05 0.0026 19.1 3.2 1 23 447 469 447 469 0.99

10 12 2.4e-06 0.00022 22.5 2.6 2 23 476 497 475 497 0.96

11 12 1.4e-07 1.3e-05 26.3 1.4 1 23 503 525 503 525 0.99

12 12 0.0033 0.32 12.6 0.1 1 23 531 553 531 553 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00042	0.04	15.4	0.6	2	20	96	114	95	118	0.95
2	12	0.085	8.2	8.1	1.2	2	23	158	179	157	179	0.95
3	12	8.7	8.3e+02	1.8	0.2	2	23	256	278	255	278	0.87
4	12	0.0092	0.88	11.2	0.3	1	20	283	302	283	304	0.92
5	12	3.4e-05	0.0033	18.8	0.8	1	23	312	335	312	335	0.98
6	12	2.4e-05	0.0023	19.3	2.2	1	23	356	378	356	378	0.98
7	12	5.6e-06	0.00054	21.3	3.8	1	23	385	407	385	407	0.99
8	12	1.2e-07	1.1e-05	26.6	2.3	3	23	421	441	419	441	0.96
9	12	2.7e-05	0.0026	19.1	3.2	1	23	447	469	447	469	0.99
10	12	2.4e-06	0.00022	22.5	2.6	2	23	476	497	475	497	0.96
11	12	1.4e-07	1.3e-05	26.3	1.4	1	23	503	525	503	525	0.99
12	12	0.0033	0.32	12.6	0.1	1	23	531	553	531	553	0.97

Sequence Information

Coding Sequence: atggctTCTAATCAAGAATTCGAAATAAAAATTGAAGAATTGTGTAGAACGTGTTTGTCTAAGGATAATGAATTGTACTCgttatttgatattattatagGTTCAACAATGACGTTAGATTATTTAGTAACATCAAGTACTGGGATAAAGACTACATCAGGTGTGAAGACCGAAGATTTGTCATCTCATGATAATGACGACTACGCCGATAGTGATTTCAATGTTTCCCTAAGTAGTGGGCCAGATTTACATGAACAAGTTGAGTGTGATGAAACCAACCGTACTTACTGCCCACTTTGCGGTACTTGCTATAATGGTGCAGAGAATTTAACGAAACATATGTGGGAAAATCATGCAGACCTTATGGGCCCAAAAAAGAGAGGCAGACCTAAGAAGATGTTAACTAGTACTATTCTTAACAAGTTGTCAGAAAATGGATTTTGCATAACATCAATGCCAGCTAAAAAGATTGAGTGCGCATTTTGCAAGCAACATTTCCAAACCAAAGAAGAATTAGGATCACACTCTATAACTCATAAAGATATGAAAGTATTGCGTTGTGACCTTTGCAAGAAAATATACCTTGATAGGAAAAAGTTTGATCATCATGACTGTATTGAAGAGAAAGCCGATGTTAACAATGCAGAAAATGATACGGCTAAACCAGAAACCAATGAAAAAAAGCCACTAAATTTTCTGTCAGAAATTACACTGGGAGAATTTCTAGACCCGAACATGGATATGGAGAACTTCAACTTGCTTATAGTATGTAGTGCTTGTAGCTGCATATTGCAATCAGAATCGGATCTCATTAACCATCGTGATGCTGAACACCCGGAGTTGTCTCATCGGTGCAACCTCTGCACTAAGGTGTTTGCTTCTTTGCGATCAGCGGCGCGCCACAGAAGCATTTGTAAGCAAattgaaagaaaatataaatgcaacacGTGTGGACTGAAATTCGcttatgaaatatctttgaaTAAGCATATCTTAAGATATCATGAGGGACAAAGCGTGTCGGTTAAATTTATTGATTCCAAAACGAAACGAGAAGAGAGACAGTTTCAGTGTGATACTTGCAATAGAAGTTTCTACAAGAGAGACTTGCTAgttaaacatactaaaatacacaTGCCAATCGAAAACTTCTTCCAATGTGATGTTTGTGAAAAGAAGTTTCACAGGAGTGACAATCTTCGCTCTCACAAACGAGTTCATCAGCCGCAGCGCGAAAAGAGTTCATCTAGTAATTGCTTATGCCTTTACTGTGGCCGCAGTTTCTCTAACTCGTCGAACTTAATCGTACACATGCGGCGTCACACTGGAGAGAAGCCCTACAAATGTGATTTTTGTGGCAAAGGTTTTCCAAGATCTTCCGACCTTCAGTGTCACAGGAGATCTCACACTGGAGAGAAACCTTGTATATGCCGTGTCTGTGGTAAAGGTTTTTCGCGCAGCAATAAGTTGTCACGCCACATGCGCGTGCACACTGGCCAGCGGCCGTACAAGTGCACCTACTGCGAGAAGGCGTTCTCGCAGAGCAACGATCTCAACCTGCACATACGCCGACATACTGGCGACCGTCCCTATATCTGCGAAGTGTGCGGCGATAGATTCATACAGGGTACCGCGTTACAGAATCACAGAAGAGCTCATGGTCATTTTCCTGCTCCTCCTGCTGCAGCTCCTTCCGAGGTGCAAGCACTGACTTTTACAGTTCAGAGTATAAGCCATAATAATAGTCACTAA
Protein Sequence: MASNQEFEIKIEELCRTCLSKDNELYSLFDIIIGSTMTLDYLVTSSTGIKTTSGVKTEDLSSHDNDDYADSDFNVSLSSGPDLHEQVECDETNRTYCPLCGTCYNGAENLTKHMWENHADLMGPKKRGRPKKMLTSTILNKLSENGFCITSMPAKKIECAFCKQHFQTKEELGSHSITHKDMKVLRCDLCKKIYLDRKKFDHHDCIEEKADVNNAENDTAKPETNEKKPLNFLSEITLGEFLDPNMDMENFNLLIVCSACSCILQSESDLINHRDAEHPELSHRCNLCTKVFASLRSAARHRSICKQIERKYKCNTCGLKFAYEISLNKHILRYHEGQSVSVKFIDSKTKREERQFQCDTCNRSFYKRDLLVKHTKIHMPIENFFQCDVCEKKFHRSDNLRSHKRVHQPQREKSSSSNCLCLYCGRSFSNSSNLIVHMRRHTGEKPYKCDFCGKGFPRSSDLQCHRRSHTGEKPCICRVCGKGFSRSNKLSRHMRVHTGQRPYKCTYCEKAFSQSNDLNLHIRRHTGDRPYICEVCGDRFIQGTALQNHRRAHGHFPAPPAAAPSEVQALTFTVQSISHNNSH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00072259;
90% Identity: iTF_01085640;
80% Identity: -