Basic Information

Insect: Ochropleura plecta
Gene Symbol: Znf296
Assembly: GCA_905475445.1
Location: FR997721.1:11554491-11561490[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.14 17 7.4 0.7 1 21 20 40 20 41 0.94

2 13 0.00036 0.043 15.5 0.6 2 20 54 72 53 76 0.95

3 13 0.0085 1 11.2 0.7 2 23 116 137 115 137 0.96

4 13 4 4.7e+02 2.8 0.3 2 23 214 236 213 236 0.89

5 13 0.0079 0.95 11.3 0.3 1 20 241 260 241 262 0.92

6 13 2.9e-05 0.0035 19.0 0.8 1 23 270 293 270 293 0.98

7 13 2e-05 0.0024 19.4 2.2 1 23 314 336 314 336 0.98

8 13 4.8e-06 0.00058 21.4 3.8 1 23 343 365 343 365 0.99

9 13 9.9e-08 1.2e-05 26.7 2.3 3 23 379 399 377 399 0.96

10 13 2.3e-05 0.0028 19.3 3.2 1 23 405 427 405 427 0.99

11 13 2e-06 0.00024 22.6 2.6 2 23 434 455 433 455 0.96

12 13 1.2e-07 1.4e-05 26.5 1.4 1 23 461 483 461 483 0.99

13 13 0.0028 0.34 12.7 0.1 1 23 489 511 489 511 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.14	17	7.4	0.7	1	21	20	40	20	41	0.94
2	13	0.00036	0.043	15.5	0.6	2	20	54	72	53	76	0.95
3	13	0.0085	1	11.2	0.7	2	23	116	137	115	137	0.96
4	13	4	4.7e+02	2.8	0.3	2	23	214	236	213	236	0.89
5	13	0.0079	0.95	11.3	0.3	1	20	241	260	241	262	0.92
6	13	2.9e-05	0.0035	19.0	0.8	1	23	270	293	270	293	0.98
7	13	2e-05	0.0024	19.4	2.2	1	23	314	336	314	336	0.98
8	13	4.8e-06	0.00058	21.4	3.8	1	23	343	365	343	365	0.99
9	13	9.9e-08	1.2e-05	26.7	2.3	3	23	379	399	377	399	0.96
10	13	2.3e-05	0.0028	19.3	3.2	1	23	405	427	405	427	0.99
11	13	2e-06	0.00024	22.6	2.6	2	23	434	455	433	455	0.96
12	13	1.2e-07	1.4e-05	26.5	1.4	1	23	461	483	461	483	0.99
13	13	0.0028	0.34	12.7	0.1	1	23	489	511	489	511	0.97

Sequence Information

Coding Sequence: ATGGATTTACTTAAACATGTTAAAATTGAGCATGGGAGCTCAGAACGCAAGTCATGTTTTGTGTGCAAAAGCTGCTTAGTCGTTTTTGATACACAGTGTAAATTGCAAGAACATGAGAAGATATGCATTAAAGTTGAGTGTGATGAAACCAACCGCACTTACTGCCCACTTTGCGGTACATGCTACAATGGTGCAGAGAATTTAACGAAACATATGTGGGAAAATCATGCAGATCTTATGGGCCCAAAAAAGAGAGGCAGACCCAAAAAGATGTTAACTAGTACCATTCTTAACAAGTTATCAGAAAATGGATTTTGCATAACATCAATGCCAGCTAAAAAAATCGAGTGCACATTTTGCAAGCaacattttgaaaacaaagaagAATTAGGATTACATGCTATAACTCACAAAGattCGAAGGTGCTGCGTTGTGTACTGTGCAAGAAAATATACCTCGATAGGCTTAAGTTTGATCACCATATCTGTATTGAAGAGAAAGCTGATATAAATAGTACAGAAAATGATTTGGCCAAAACAGAAAGTACTGCTAAAAGGCCTCAAAATATTCCGTCAGAAATAACACTCCGAGAATTTCTAGACCCAAACATGGATATGGAGTATATCAACTTGCTTATAGTATGTAGTACTTGTAGCTGCATATTGCAATCAGAAACGGATCTCATAAACCACCGCGATGCCGAGCACCCGGAACTGTCTCACAGGTGCAACCTCTGCACTAAGGTGTTTGCTTCTTTGCGGTCAGCGGCGCGCCACAGAAGCATTTGTAAGGAAattgaaagaaaatataaatgtaacacGTGTGGACTGAAATTCGCTTATGAAATATCTTTGAATAAGCATATTCTAAGATACCATGAGGGGCAAAGCGTGTCGGTTAAATTTATTGATTCTAAAACCAAAAGAGAAGAGCGACAGTTTCAGTGTGATACTTGCAATAGAAGTTTCTACAAAAGAGACCTACTAgttaaacatactaaaatacACATGCCAATCGAAAACTTCTTCCAATGTGATGTTTGTGAAAAGAAGTTTCATAGGAGTGACAATCTGCGCTCTCACAAACGAGTTCATCAGCCGCAGCGCGAAAAGACTTCATCTAGTAACTGCTTATGCCTTTACTGTGGCCGCAGTTTCTCTAACTCGTCGAACTTAATCGTACACATGCGCCGCCACACCGGAGAGAAGCCCTACAAGTGTGATTTTTGTGGCAAAGGTTTTCCAAGATCTTCCGATCTTCAGTGTCACAGGAGATCTCACACTGGAGAAAAACCTTGTATATGCCGTGTTTGTGGTAAagGTTTTTCGCGCAGCAATAAGCTGTCCCGACACATGCGCGTGCACACTGGCCAGCGGCCGTACAAGTGCACGTACTGCGAAAAGGCTTTCTCGCAGAGCAACGACCTCAACCTGCACATCCGCCGACACACTGGCGACCGGCCCTACATCTGCGAAGTATGCGGCGACAGATTTATACAGGGTACCGCATTACAGAATCACCGACGTGCTCATGGCCACTTTCCTGCTCCTCCCACAGAGGCTCCTGCAGAAGTGGAAGCACTGACTTTTGCAGTCTAA
Protein Sequence: MDLLKHVKIEHGSSERKSCFVCKSCLVVFDTQCKLQEHEKICIKVECDETNRTYCPLCGTCYNGAENLTKHMWENHADLMGPKKRGRPKKMLTSTILNKLSENGFCITSMPAKKIECTFCKQHFENKEELGLHAITHKDSKVLRCVLCKKIYLDRLKFDHHICIEEKADINSTENDLAKTESTAKRPQNIPSEITLREFLDPNMDMEYINLLIVCSTCSCILQSETDLINHRDAEHPELSHRCNLCTKVFASLRSAARHRSICKEIERKYKCNTCGLKFAYEISLNKHILRYHEGQSVSVKFIDSKTKREERQFQCDTCNRSFYKRDLLVKHTKIHMPIENFFQCDVCEKKFHRSDNLRSHKRVHQPQREKTSSSNCLCLYCGRSFSNSSNLIVHMRRHTGEKPYKCDFCGKGFPRSSDLQCHRRSHTGEKPCICRVCGKGFSRSNKLSRHMRVHTGQRPYKCTYCEKAFSQSNDLNLHIRRHTGDRPYICEVCGDRFIQGTALQNHRRAHGHFPAPPTEAPAEVEALTFAV*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01526338;
90% Identity: iTF_01095168;
80% Identity: -