Basic Information

Insect: Oligia strigilis
Gene Symbol: -
Assembly: GCA_951800025.1
Location: OX637547.1:15134726-15143738[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 5e-05 0.0048 18.3 2.2 1 23 42 64 42 64 0.97

2 20 0.0026 0.25 12.9 0.6 1 20 70 89 70 92 0.94

3 20 1.3e-05 0.0013 20.1 5.6 1 23 111 133 111 133 0.98

4 20 6.1e-05 0.0058 18.0 4.1 1 23 139 161 139 161 0.99

5 20 2.3e-05 0.0022 19.3 5.3 1 23 167 189 167 189 0.97

6 20 5.3e-06 0.00051 21.4 7.4 1 23 195 217 195 217 0.97

7 20 4.5e-07 4.3e-05 24.7 2.9 1 23 223 245 223 245 0.97

8 20 6.3e-05 0.0061 18.0 6.7 1 23 251 273 251 273 0.97

9 20 6.3e-05 0.006 18.0 6.5 1 23 279 301 279 301 0.97

10 20 3e-07 2.9e-05 25.3 1.9 1 23 307 329 307 329 0.98

11 20 6e-06 0.00057 21.2 7.7 1 23 335 357 335 357 0.98

12 20 1.6e-05 0.0015 19.9 6.6 1 23 363 385 363 385 0.98

13 20 1.2e-06 0.00012 23.3 4.2 1 23 391 413 391 413 0.98

14 20 4.2e-06 0.0004 21.7 5.0 1 23 419 441 419 441 0.96

15 20 1.3e-06 0.00013 23.2 5.0 1 23 447 469 447 469 0.98

16 20 1.9e-06 0.00018 22.8 6.0 1 23 475 497 475 497 0.98

17 20 3.7e-05 0.0035 18.7 7.9 1 23 503 525 503 525 0.97

18 20 3.8e-06 0.00036 21.8 5.4 1 23 531 553 531 553 0.98

19 20 0.00046 0.043 15.3 0.3 1 23 560 582 560 582 0.96

20 20 0.19 19 7.0 4.9 1 23 594 616 594 616 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	5e-05	0.0048	18.3	2.2	1	23	42	64	42	64	0.97
2	20	0.0026	0.25	12.9	0.6	1	20	70	89	70	92	0.94
3	20	1.3e-05	0.0013	20.1	5.6	1	23	111	133	111	133	0.98
4	20	6.1e-05	0.0058	18.0	4.1	1	23	139	161	139	161	0.99
5	20	2.3e-05	0.0022	19.3	5.3	1	23	167	189	167	189	0.97
6	20	5.3e-06	0.00051	21.4	7.4	1	23	195	217	195	217	0.97
7	20	4.5e-07	4.3e-05	24.7	2.9	1	23	223	245	223	245	0.97
8	20	6.3e-05	0.0061	18.0	6.7	1	23	251	273	251	273	0.97
9	20	6.3e-05	0.006	18.0	6.5	1	23	279	301	279	301	0.97
10	20	3e-07	2.9e-05	25.3	1.9	1	23	307	329	307	329	0.98
11	20	6e-06	0.00057	21.2	7.7	1	23	335	357	335	357	0.98
12	20	1.6e-05	0.0015	19.9	6.6	1	23	363	385	363	385	0.98
13	20	1.2e-06	0.00012	23.3	4.2	1	23	391	413	391	413	0.98
14	20	4.2e-06	0.0004	21.7	5.0	1	23	419	441	419	441	0.96
15	20	1.3e-06	0.00013	23.2	5.0	1	23	447	469	447	469	0.98
16	20	1.9e-06	0.00018	22.8	6.0	1	23	475	497	475	497	0.98
17	20	3.7e-05	0.0035	18.7	7.9	1	23	503	525	503	525	0.97
18	20	3.8e-06	0.00036	21.8	5.4	1	23	531	553	531	553	0.98
19	20	0.00046	0.043	15.3	0.3	1	23	560	582	560	582	0.96
20	20	0.19	19	7.0	4.9	1	23	594	616	594	616	0.99

Sequence Information

Coding Sequence: ATGAGGCGCTTACGAGTTCCAGGTTCCAGGAATTTTGATCCGCAGGTAATAAGCGACGTGGAAGTAGAAGTGGAAGCCGGCACCAGCGCAGCCATGTCTGAAGCAGAATCCTCGCCCGGCCACCACTCGTGTGACATCTGCGGGAAAATATTCCAGTTCCGATACCAACTTATTGTTCATAGGCGTTATCACGGTGAAAGTAAGCCATTCACGTGTCAAGTTTGCGGTTCCGCATTTGCAAATCCTGTTGAATTGTCGAGGCATGGAAAATGCCATCTTGccGGAGACCCGAACGAAAGACACGCTAAGAGAATGGCGCAAGATAAGCCATACGCTTGCACAACTTGCCACAAAACCTTCTCCCGTAAAGAACATTTGGACAATCACGTTCGAAGTCATACTGGAGAAACTCCTTATAGATGCGAATTCTGCGCGAAGACTTTCACCCGCAAAGAGCACATGGTCAACCACGTACGAAAACATACGGGCGAAACTCCGCACCGATGTGATATTTGCAAGAAGAGCTTCACCAGGAAAGAGCATTTCATGAACCATGTTATGTGGCATACAGGTGAAACGCCGCACCATTGTACAATATGCGGCAAGAAGTATACTAGGAAGGAGCATTTAGTGAACCATATGCGATCTCACACGAACGATACTCCATTCCGATGCGAACTGTGCGGCAAGTCGTTCACGAGAAAGGAACACTTCACCAATCACATACTGTGGCATACGGGAGAAACCCCTCACCGCTGCGACTTCTGTTCTAAAACGTTCACTCGTAAGGAGCATCTCCTGAACCACGTCCGTCAACACACGGGCGAGTCGCCTCACCGCTGCAACTTCTGCAGCAAGTCATTCACACGCCGGGAACACCTTGTCAACCACGTGCGACAACACACCGGGGAAACGCCCTTCCAATGCGGATACTGTCCTAAAGCTTTCACAAGGAAGGATCACCTCGTGAACCACGTCCGTCAGCATACGGGCGAATCCCCGCACAAGTGCTCGTACTGCACAAAGTCCTTCACTCGCAAGGAACACCTGACGAATCATGTGCGACAACACACGGGCGAGTCTCCGCACCGATGTACTTACTGCGCCAAGTCCTTCACGAGGAAGGAACACCTCACTAACCACGTTAGACAGCACACGGGAGAAACGCCACACAAGTGTACGTACTGCCCGAGGGCCTTCGCGCGCAAGGAGCATCTCAACAACCACATCCGACAGCACACCGGCATCACTCCGCACGCCTGCTCCTACTGCAGCAAGAGTTTCACCAGGAAGGAACATCTCGTCAATCATATTCGGCAACACACGGGCGAGACTCCGTTCAAGTGTACGTACTGTTCAAAGTCGTTCTCTCGTAAGGAGCATCTCACAAACCACGTGAACCTTCACACTGGAGAAACGCCACACAAATGTCCCTTCTGcacaaaaacattttccagaaaGGAACATTTGACCAACCACGTCAGAATTCACACGGGCGAGTCTCCGCACCGCTGTGACTTCTGCCAGAAGACGTTTACTCGTAAGGAGCACTTGACGAATCATCTGAAGCAGCATACCGGCGACACCGCACACGTTTGCAAAGTGTGCTCCAAGAACTTCACCAGGAAAGAACACCTTGTCACACATATGAGGTCGCACAGTTGTGGCGAGCGTCCATTCAGTTGCGGCGAGTGCGGCAAATCTTTCCCATTGAAAGGCAACCTACTATTCCATGAACGATCCCATGCCAAGAACAATGCTAATGCTGCCAATAAGCCCTACCGATGTGAAGTCTGCTCCAAAGAATTCCTCTGTAAAGGCCATTTGGTGTCTCATCGGCGCACACACGCGGAGTGGGTGGAAGGGGCAACGACCGGCGAAGCACCCGCTGAAACAGAAGACTTTGTCCAGATTGAGAGATCCAGTTAA
Protein Sequence: MRRLRVPGSRNFDPQVISDVEVEVEAGTSAAMSEAESSPGHHSCDICGKIFQFRYQLIVHRRYHGESKPFTCQVCGSAFANPVELSRHGKCHLAGDPNERHAKRMAQDKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCTICGKKYTRKEHLVNHMRSHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSYCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLTNHVRQHTGETPHKCTYCPRAFARKEHLNNHIRQHTGITPHACSYCSKSFTRKEHLVNHIRQHTGETPFKCTYCSKSFSRKEHLTNHVNLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCDFCQKTFTRKEHLTNHLKQHTGDTAHVCKVCSKNFTRKEHLVTHMRSHSCGERPFSCGECGKSFPLKGNLLFHERSHAKNNANAANKPYRCEVCSKEFLCKGHLVSHRRTHAEWVEGATTGEAPAETEDFVQIERSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01095148; iTF_01026573;
90% Identity: iTF_01026573;
80% Identity: iTF_01095148;