Basic Information

Insect: Oligia strigilis
Gene Symbol: -
Assembly: GCA_951800025.1
Location: OX637547.1:15134726-15143738[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.67 9.3e+02 1.0 0.1 19 26 44 51 38 56 0.88

2 19 6.1 8.4e+03 -2.1 0.0 18 27 71 80 66 87 0.80

3 19 0.023 31 5.7 1.4 15 30 109 125 100 134 0.72

4 19 0.0061 8.5 7.5 2.0 6 38 129 161 124 162 0.75

5 19 0.041 56 4.9 3.4 5 33 156 180 153 190 0.81

6 19 0.0074 10 7.3 7.0 18 38 196 217 181 221 0.87

7 19 0.011 15 6.7 0.5 16 32 222 239 218 251 0.78

8 19 0.019 26 6.0 2.7 6 33 237 268 235 274 0.71

9 19 0.019 27 5.9 3.8 5 38 268 301 264 302 0.78

10 19 0.0011 1.5 10.0 0.8 5 38 296 329 292 335 0.85

11 19 0.043 59 4.8 6.4 13 38 331 357 324 363 0.80

12 19 0.024 33 5.6 5.4 13 38 359 385 352 391 0.81

13 19 0.085 1.2e+02 3.9 2.2 6 32 381 407 380 419 0.73

14 19 0.16 2.3e+02 3.0 4.2 18 38 420 441 408 443 0.85

15 19 0.014 19 6.4 4.2 9 33 440 464 436 470 0.76

16 19 0.0093 13 6.9 2.0 14 33 472 492 464 498 0.75

17 19 0.00057 0.79 10.8 4.9 6 38 493 525 492 531 0.85

18 19 0.0019 2.7 9.1 3.5 15 38 529 553 526 553 0.91

19 19 5.1 7e+03 -1.8 0.6 18 26 595 603 587 616 0.77

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.67	9.3e+02	1.0	0.1	19	26	44	51	38	56	0.88
2	19	6.1	8.4e+03	-2.1	0.0	18	27	71	80	66	87	0.80
3	19	0.023	31	5.7	1.4	15	30	109	125	100	134	0.72
4	19	0.0061	8.5	7.5	2.0	6	38	129	161	124	162	0.75
5	19	0.041	56	4.9	3.4	5	33	156	180	153	190	0.81
6	19	0.0074	10	7.3	7.0	18	38	196	217	181	221	0.87
7	19	0.011	15	6.7	0.5	16	32	222	239	218	251	0.78
8	19	0.019	26	6.0	2.7	6	33	237	268	235	274	0.71
9	19	0.019	27	5.9	3.8	5	38	268	301	264	302	0.78
10	19	0.0011	1.5	10.0	0.8	5	38	296	329	292	335	0.85
11	19	0.043	59	4.8	6.4	13	38	331	357	324	363	0.80
12	19	0.024	33	5.6	5.4	13	38	359	385	352	391	0.81
13	19	0.085	1.2e+02	3.9	2.2	6	32	381	407	380	419	0.73
14	19	0.16	2.3e+02	3.0	4.2	18	38	420	441	408	443	0.85
15	19	0.014	19	6.4	4.2	9	33	440	464	436	470	0.76
16	19	0.0093	13	6.9	2.0	14	33	472	492	464	498	0.75
17	19	0.00057	0.79	10.8	4.9	6	38	493	525	492	531	0.85
18	19	0.0019	2.7	9.1	3.5	15	38	529	553	526	553	0.91
19	19	5.1	7e+03	-1.8	0.6	18	26	595	603	587	616	0.77

Sequence Information

Coding Sequence: ATGAGGCGCTTACGAGTTCCAGGTTCCAGGAATTTTGATCCGCAGGTAATAAGCGACGTGGAAGTAGAAGTGGAAGCCGGCACCAGCGCAGCCATGTCTGAAGCAGAATCCTCGCCCGGCCACCACTCGTGTGACATCTGCGGGAAAATATTCCAGTTCCGATACCAACTTATTGTTCATAGGCGTTATCACGGTGAAAGTAAGCCATTCACGTGTCAAGTTTGCGGTTCCGCATTTGCAAATCCTGTTGAATTGTCGAGGCATGGAAAATGCCATCTTGccGGAGACCCGAACGAAAGACACGCTAAGAGAATGGCGCAAGATAAGCCATACGCTTGCACAACTTGCCACAAAACCTTCTCCCGTAAAGAACATTTGGACAATCACGTTCGAAGTCATACTGGAGAAACTCCTTATAGATGCGAATTCTGCGCGAAGACTTTCACCCGCAAAGAGCACATGGTCAACCACGTACGAAAACATACGGGCGAAACTCCGCACCGATGTGATATTTGCAAGAAGAGCTTCACCAGGAAAGAGCATTTCATGAACCATGTTATGTGGCATACAGGTGAAACGCCGCACCATTGTACAATATGCGGCAAGAAGTATACTAGGAAGGAGCATTTAGTGAACCATATGCGATCTCACACGAACGATACTCCATTCCGATGCGAACTGTGCGGCAAGTCGTTCACGAGAAAGGAACACTTCACCAATCACATACTGTGGCATACGGGAGAAACCCCTCACCGCTGCGACTTCTGTTCTAAAACGTTCACTCGTAAGGAGCATCTCCTGAACCACGTCCGTCAACACACGGGCGAGTCGCCTCACCGCTGCAACTTCTGCAGCAAGTCATTCACACGCCGGGAACACCTTGTCAACCACGTGCGACAACACACCGGGGAAACGCCCTTCCAATGCGGATACTGTCCTAAAGCTTTCACAAGGAAGGATCACCTCGTGAACCACGTCCGTCAGCATACGGGCGAATCCCCGCACAAGTGCTCGTACTGCACAAAGTCCTTCACTCGCAAGGAACACCTGACGAATCATGTGCGACAACACACGGGCGAGTCTCCGCACCGATGTACTTACTGCGCCAAGTCCTTCACGAGGAAGGAACACCTCACTAACCACGTTAGACAGCACACGGGAGAAACGCCACACAAGTGTACGTACTGCCCGAGGGCCTTCGCGCGCAAGGAGCATCTCAACAACCACATCCGACAGCACACCGGCATCACTCCGCACGCCTGCTCCTACTGCAGCAAGAGTTTCACCAGGAAGGAACATCTCGTCAATCATATTCGGCAACACACGGGCGAGACTCCGTTCAAGTGTACGTACTGTTCAAAGTCGTTCTCTCGTAAGGAGCATCTCACAAACCACGTGAACCTTCACACTGGAGAAACGCCACACAAATGTCCCTTCTGcacaaaaacattttccagaaaGGAACATTTGACCAACCACGTCAGAATTCACACGGGCGAGTCTCCGCACCGCTGTGACTTCTGCCAGAAGACGTTTACTCGTAAGGAGCACTTGACGAATCATCTGAAGCAGCATACCGGCGACACCGCACACGTTTGCAAAGTGTGCTCCAAGAACTTCACCAGGAAAGAACACCTTGTCACACATATGAGGTCGCACAGTTGTGGCGAGCGTCCATTCAGTTGCGGCGAGTGCGGCAAATCTTTCCCATTGAAAGGCAACCTACTATTCCATGAACGATCCCATGCCAAGAACAATGCTAATGCTGCCAATAAGCCCTACCGATGTGAAGTCTGCTCCAAAGAATTCCTCTGTAAAGGCCATTTGGTGTCTCATCGGCGCACACACGCGGAGTGGGTGGAAGGGGCAACGACCGGCGAAGCACCCGCTGAAACAGAAGACTTTGTCCAGATTGAGAGATCCAGTTAA
Protein Sequence: MRRLRVPGSRNFDPQVISDVEVEVEAGTSAAMSEAESSPGHHSCDICGKIFQFRYQLIVHRRYHGESKPFTCQVCGSAFANPVELSRHGKCHLAGDPNERHAKRMAQDKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCTICGKKYTRKEHLVNHMRSHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSYCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLTNHVRQHTGETPHKCTYCPRAFARKEHLNNHIRQHTGITPHACSYCSKSFTRKEHLVNHIRQHTGETPFKCTYCSKSFSRKEHLTNHVNLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCDFCQKTFTRKEHLTNHLKQHTGDTAHVCKVCSKNFTRKEHLVTHMRSHSCGERPFSCGECGKSFPLKGNLLFHERSHAKNNANAANKPYRCEVCSKEFLCKGHLVSHRRTHAEWVEGATTGEAPAETEDFVQIERSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01095156;
90% Identity: iTF_01026573;
80% Identity: iTF_01095156;