Basic Information

Insect: Oligia latruncula
Gene Symbol: -
Assembly: GCA_948474745.1
Location: OX419710.1:2676827-2718759[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 1.9 1.3e+02 3.6 0.9 2 23 491 512 490 512 0.90

2 18 0.0021 0.14 13.0 0.0 1 23 522 545 522 545 0.95

3 18 0.093 6.5 7.8 3.2 2 21 698 717 698 718 0.94

4 18 0.04 2.8 8.9 3.8 2 23 779 800 778 800 0.95

5 18 0.87 60 4.7 0.7 1 23 812 836 812 836 0.91

6 18 0.00016 0.011 16.4 0.5 2 23 843 866 842 866 0.97

7 18 0.25 17 6.4 0.4 1 23 872 894 872 894 0.93

8 18 0.0038 0.27 12.1 2.9 1 23 900 922 900 922 0.98

9 18 0.59 41 5.2 0.5 2 20 933 951 933 953 0.90

10 18 0.044 3.1 8.8 0.2 1 23 1032 1054 1032 1054 0.97

11 18 2.3 1.6e+02 3.4 7.2 1 23 1061 1083 1061 1083 0.95

12 18 0.0016 0.11 13.4 1.8 1 23 1127 1150 1127 1150 0.95

13 18 0.00056 0.039 14.8 0.5 1 23 1157 1180 1157 1180 0.98

14 18 0.0045 0.32 11.9 0.2 2 23 1202 1224 1201 1224 0.96

15 18 0.0053 0.37 11.7 4.3 3 23 1250 1271 1249 1271 0.95

16 18 0.00034 0.024 15.4 1.2 1 23 1297 1319 1297 1319 0.96

17 18 0.00014 0.0095 16.7 0.1 1 23 1325 1347 1325 1347 0.97

18 18 0.00043 0.03 15.1 0.7 3 23 1355 1376 1353 1376 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	1.9	1.3e+02	3.6	0.9	2	23	491	512	490	512	0.90
2	18	0.0021	0.14	13.0	0.0	1	23	522	545	522	545	0.95
3	18	0.093	6.5	7.8	3.2	2	21	698	717	698	718	0.94
4	18	0.04	2.8	8.9	3.8	2	23	779	800	778	800	0.95
5	18	0.87	60	4.7	0.7	1	23	812	836	812	836	0.91
6	18	0.00016	0.011	16.4	0.5	2	23	843	866	842	866	0.97
7	18	0.25	17	6.4	0.4	1	23	872	894	872	894	0.93
8	18	0.0038	0.27	12.1	2.9	1	23	900	922	900	922	0.98
9	18	0.59	41	5.2	0.5	2	20	933	951	933	953	0.90
10	18	0.044	3.1	8.8	0.2	1	23	1032	1054	1032	1054	0.97
11	18	2.3	1.6e+02	3.4	7.2	1	23	1061	1083	1061	1083	0.95
12	18	0.0016	0.11	13.4	1.8	1	23	1127	1150	1127	1150	0.95
13	18	0.00056	0.039	14.8	0.5	1	23	1157	1180	1157	1180	0.98
14	18	0.0045	0.32	11.9	0.2	2	23	1202	1224	1201	1224	0.96
15	18	0.0053	0.37	11.7	4.3	3	23	1250	1271	1249	1271	0.95
16	18	0.00034	0.024	15.4	1.2	1	23	1297	1319	1297	1319	0.96
17	18	0.00014	0.0095	16.7	0.1	1	23	1325	1347	1325	1347	0.97
18	18	0.00043	0.03	15.1	0.7	3	23	1355	1376	1353	1376	0.95

Sequence Information

Coding Sequence: ATGACGGAGCCGCAACCACCATTGATCCTCTGCATGGAGAATGCGTCGGGAGAGGATGTGGCGCTCAGGATAGAACCAGATGATAACTTCCAGATGTTTCTGGATAAGGCCAGATCACTACTAGGATTCGATGTAGACATAAACTCGATAACCAGAAACCAGCCCGTTTCACTATCAGAAAACGTCTACCAATTTCTAGTAAACGCTGAACAAAACTTACAAGCAGACGAACTAACACAAAACTTTGACCAAATGTTGGATCCCAACGATGGAGCCAACGATTTGGTCTACATATTGGACGATGGCACACAAATCCGCGCCTCACAAATACATTTCGATAATGATGATCCTTTAGTTGATTTGACAGCCGAAAAAATACCTTTTGTTAAATACGCTGATGATGTCACTGATGTAGATGATGATGATATAAATATTCACGAGACTAAAAAGATTAATATTGTTGATAGTCCTGTGTCGAGATGGTCAAGTAAAAATTCTAGCCCGAAATGCAGTTTTGTCAACTCTCTACCATTCAAATTAGTGTGCAATAATACGTCCGGATTCGAAGCGCAATTCACGAAATATTTAGAAGCGAATACAACAAAAACTTACGCTACCCTAAACCCGGTGACAACTCGAAATAAATCCCCAAAAAGTTTGATCAAAGATAATTTTAAGAACTACGATGATAACAGCTATCAGAGGAATGATAACTTGTCGTACACTCGGGAGGAGATTTTGAACATGTTCAAAGACTCCCCGATGACGTCCCTGCCGTACGACCAAGGTTACAGTGAGAGGAGACATGTTCGGAAGACGGATCCTACGAGACTTGTTCATAAAAGTTGGAGTAAGCCTCTTTCTTACGTCGACATTGATGGGGTATTGATTGGGGAGAGCGAGAGCCAAATCTGTTTTATTTGCGGCAAACATGTGGATAACAACGTGGATAAATTGTATCTTTTTGATAACGAAGACCAGCGGTTATATAGGTGTTCTCCGCAGAAGAAAATGTCGACTCAGCTAAAAATTATCTGCGAATGTTGTCTCAACGAAAACTTCACACCATGTAGAATGAAAAGCGCAAATCAATTCTTGAATCCTGATGAATATCTCGTCATACGAAACAATCAGCAATACATCTTCCAAAAAGTTAAAAACTTCAATTTCGCACACCTAGACAAAGCTAAAGAGATCATAAACAAGATAGAGAAGAAAATAGAGAAGGAAGAGTTTGTTAAAGTCGAAATTGGCTCTGATGGGGAAATTATAACCAAGCCCATAGACGCTAGGTCTGATGACATCATTACTGTTAAAGATGAGAAGAAGGAGGGTAGTTCGAGTGACGTAGAGATTGTAGAGCCTGAACCAGAGATAGATAATATCATAGACAATTTGGAGGAAGCTGATGAGGAGGTAAAAGAGTTTTTGGGAAAATATCAGCGTGATGATAGTGAAGTTACTGAGTTAAAATGCAGATTCTGTGAGCAAATCTTCTCGGATCTGGCGGCAGTAACAGATCACTGTGAAACGCATAAACATGACCTAGAAGATGGAGAAGTATTTCCTTGTCCACTCTGCAATTATGGTTATGCAAATTTAAAGTGGCTAAAAGCTCATGTGAAGGCGGCCCACGAGAAGACTGAAACGCCAAAAATATTTAAAGATGAAAATGAACCCGAGAAAGAGGAGAATAAAGATGACGAAGAGACTAAAGCAATAAAATCATCATCTGCTAAAGCACGATCATCACCCATTGCGACTCGCACTAGAAGTTCTAGTAAAAAGGGAGATGGCGATAGAAAAGACGATGTAAAGGCGGATGAAGTTAAGGCTGATTCTAAAACTGAGGTGGTTAGTTATAGACAACTGTCAATCTTCTATGTAGTATCTTCAAAAGAGTTGTTAATGAATTTGCCGGAGCCACCCATCATAAAAACGGAGGTAAAGCAAGAATGCGTGGACAGCAGTGAGGATGAGATCTGGATCGTTCAGACTGCTGATGCCGAAGCCACACAGGAGCTGCAGAAACTACTCTGTAGTGCCAAGGTTAAAAAAGATGGGCAAGATGGTGAATCTGAAAACTCACCTAAATGTTTTAACTGCGGTCAAATATTCGCGAACGCAGATTGCCTGTCAAACCATCGTTGTAGAAGACGCAACCAGAAGCGGAAGTCCAAGGACAACCTTATATGTATACCTACTGAGGAAGACTTCTTGAAGAGAGCTCAGGGACGCCCTCGACCAGCTGATACGTCAGTAGACAGTGATCTACTTACTATGCGTTCCAAAAAACGCCGCAGCCGGGAACCGACCTCCAACCCTCAGGTAGTGACTTGCCACAACTGTAACGAGTCCTTCACGTCCAAAGTTAGACTCAAGTTTCATATGCAATTCCACGAAACATCAAACCAAGCCCGATCCGACGGGCGCTACTCCTGCTCCGAGTGTGACGACGCCACCTTCGCCACGGAGACGGAACTCTTCGACCACGTGCACTTCCAGCACGACAAGCAGAAGAGGTGGCAATGTCCCGTCACGGGCTGCGGGAAGACCTTCTTCCTCAGGGCAACCCTTACAAAGCACAGTCGCACGCACACAGACACACGACGATACGTGTGCGTCACATGTAACAAGCGGTTTTTAGACAAACAGACGCTAGATGAACATGGAGTGACGCATTTACAGATAAAACCCTTCCAATGCCACATATGCCTGAAGCAGTTAACCCGTCGCTCGCGCTTGCGCATGCATGTGCGTGCACATGAAGAGGAGTTGTCGCCGAGACTCGTGCGCGTCTGTGCGGTATGCACGAGGGCCTTTAGAGATCATCGGCATGCACAGGAACACGCATCAAAATCTACAGAATGTATCGAAGCTTTTGCGAACGAATTAAAAGAAGAAGCGGAAGAGGTGTCAGTACAATTGTCGCCCACCAGTGGACTTGTCAGACATACTGTGCAGATAATTGAATCTCCGAAGCTGTCAAAGCCGATCAAACGCCAAGTGTCGAATGAAATGGGCGAGCACCTTCTGTCTCAGTTGGCTGATGAAGCACGCGCTTTGATACGAGTGGTCGAGATAGAGAAGGCCTTCCGCTGCGAGTATTGTGAAGATGTTTTCTATTTGGAGAGCGGTCTGAACACGCACCGCGCGATACATAAAGGAGTCAAAAATCCCTTCACTTGCCACATATGTAAAGTTAGCTTCGCTACTTATTCCAGATGCACAACCCACAAAACGACACACGGCTTCTACAAACGCTCGCTAGCCGACGCTAAGAAGCAAGCCGACGGCCCCCCACAAGCTGACGCCGACTCCTCCGCCCGCTCAGCCACGGGCATACTAGGATACGGCGACTTTCCTGTCGTCAAACACTTCCTGTGCGAGGACTGTGGGCGTTCGTACCTACACTGGACGTACCTACAAGTACATAGACGCATGAAACACGCAAACGAAAACTTTCTGTACAAATGTAACCAGTGCGAGCTTACATTTCCTAACAGTTGGGGCCTGGCATATCATCGTAAGAAGGTGCACTGCAAGTCTGGAGCTGACGACCCTGGAACCATCAATAAGAGCAACAGGGATGATTATAGGATACCGTGTCGGGATTGTGACCAGGTTCTGCCCAACAAAACAGCTTTATACAAACATCGGAAGAAAGAACACACCGATGGAACTGCACGGGCTTATTCTAAACCAGGAATGTATGCGAGTACAGAGTCAGAATCTACAGGCGGAGCGTGTCCCCATTGTCACGCCACGTTCACGCACGCGATTGATCTGCACAAACACGTCAAAGAAGTCCACGGCAAAGACGAGGAGTCTTGCCTATCCTGCAACAACAAGACATCGACCACAGAGGGGGCGTGTCCACGTCGTCCGCACGCGTGTCCCGTCTGCGGACACGCCTTTCGGACGCTCTCTATGCGGAACGAACATCTGAGGGTACATACTGGGGAGAGACCCTTTCCTTGTGACGTCTGCGGAGTTGCGTTTAGGAGGTCCACAGCTATGCGGAACCACCGTCTGATCCACACCGGAGTGCGCGCGTGGGCGTGCGGGCGCTGTCCCAAGCGCTTCCGTATCCGCTCCGACCTGCGCACGCACCTGCGGCTCAAACATCCTGCTACTATTGTAGTTGTAGAGATGGAAGGCCTAAACCCATCGTCTGAAGAAGTACTGAAGGCGCTCGCTGCAGAAAACGTTCCACACGACAAGCTAATAGACATCACTAAGATGTCCTTCACGAAGGGCTCCACGAGCGTGATACCTTCGTGCGCGCGCGCACTATCCGCTCTGAACAACGTGCCGCGCACACACGTCGCGTGCATCAAACCTACACCCGCACTGGAAGGTTTTCAACCGGCCCGTCGAGGTCGCGGCATCGCTAAAAACCCGCGGCGGCCCAAGATACTACAGCGAGGGGAGGAGGAGCCACACGACCACTCTGCCTACCCCATTGTTGGTGGCGAGGAGCTGTCAGATCTGAACGTCCTACTGCGGGACGGCGTGCTAGTCAACGGGAACCAAATGGTCCAGCTACAGTTAGATGACCCTATTCTGATGGAGTAG
Protein Sequence: MTEPQPPLILCMENASGEDVALRIEPDDNFQMFLDKARSLLGFDVDINSITRNQPVSLSENVYQFLVNAEQNLQADELTQNFDQMLDPNDGANDLVYILDDGTQIRASQIHFDNDDPLVDLTAEKIPFVKYADDVTDVDDDDINIHETKKINIVDSPVSRWSSKNSSPKCSFVNSLPFKLVCNNTSGFEAQFTKYLEANTTKTYATLNPVTTRNKSPKSLIKDNFKNYDDNSYQRNDNLSYTREEILNMFKDSPMTSLPYDQGYSERRHVRKTDPTRLVHKSWSKPLSYVDIDGVLIGESESQICFICGKHVDNNVDKLYLFDNEDQRLYRCSPQKKMSTQLKIICECCLNENFTPCRMKSANQFLNPDEYLVIRNNQQYIFQKVKNFNFAHLDKAKEIINKIEKKIEKEEFVKVEIGSDGEIITKPIDARSDDIITVKDEKKEGSSSDVEIVEPEPEIDNIIDNLEEADEEVKEFLGKYQRDDSEVTELKCRFCEQIFSDLAAVTDHCETHKHDLEDGEVFPCPLCNYGYANLKWLKAHVKAAHEKTETPKIFKDENEPEKEENKDDEETKAIKSSSAKARSSPIATRTRSSSKKGDGDRKDDVKADEVKADSKTEVVSYRQLSIFYVVSSKELLMNLPEPPIIKTEVKQECVDSSEDEIWIVQTADAEATQELQKLLCSAKVKKDGQDGESENSPKCFNCGQIFANADCLSNHRCRRRNQKRKSKDNLICIPTEEDFLKRAQGRPRPADTSVDSDLLTMRSKKRRSREPTSNPQVVTCHNCNESFTSKVRLKFHMQFHETSNQARSDGRYSCSECDDATFATETELFDHVHFQHDKQKRWQCPVTGCGKTFFLRATLTKHSRTHTDTRRYVCVTCNKRFLDKQTLDEHGVTHLQIKPFQCHICLKQLTRRSRLRMHVRAHEEELSPRLVRVCAVCTRAFRDHRHAQEHASKSTECIEAFANELKEEAEEVSVQLSPTSGLVRHTVQIIESPKLSKPIKRQVSNEMGEHLLSQLADEARALIRVVEIEKAFRCEYCEDVFYLESGLNTHRAIHKGVKNPFTCHICKVSFATYSRCTTHKTTHGFYKRSLADAKKQADGPPQADADSSARSATGILGYGDFPVVKHFLCEDCGRSYLHWTYLQVHRRMKHANENFLYKCNQCELTFPNSWGLAYHRKKVHCKSGADDPGTINKSNRDDYRIPCRDCDQVLPNKTALYKHRKKEHTDGTARAYSKPGMYASTESESTGGACPHCHATFTHAIDLHKHVKEVHGKDEESCLSCNNKTSTTEGACPRRPHACPVCGHAFRTLSMRNEHLRVHTGERPFPCDVCGVAFRRSTAMRNHRLIHTGVRAWACGRCPKRFRIRSDLRTHLRLKHPATIVVVEMEGLNPSSEEVLKALAAENVPHDKLIDITKMSFTKGSTSVIPSCARALSALNNVPRTHVACIKPTPALEGFQPARRGRGIAKNPRRPKILQRGEEEPHDHSAYPIVGGEELSDLNVLLRDGVLVNGNQMVQLQLDDPILME

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00121732;
90% Identity: iTF_01247427;
80% Identity: -