Olat021326.1
Basic Information
- Insect
- Oligia latruncula
- Gene Symbol
- retn
- Assembly
- GCA_948474745.1
- Location
- OX419701.1:11751461-11759228[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.6e-20 1.2e-16 61.2 0.0 16 89 8 79 5 79 0.95 2 2 5.7 1e+04 -2.7 0.0 25 38 207 220 169 222 0.58
Sequence Information
- Coding Sequence
- ATGGTTATTGATTGTATTCTTCATGGCACTCCAATCAACCGGCTACCGATAATGGCGAAGTCGGTGCTAGACCTGTATGAGCTATACAACCTGGTGATAGCTCGCGGCGGGCTGGTGGAGGTCATCAACAAGAAACTGTGGCAGGAGATCATCAAGGGACTGCGGCTGCCGTCGTCTATCACGTCTGCTGCCTTCACGTTACGCACACAATACATGAAATACCTGTATGACTACGAGTGCGAGAAGAAGAACCTATCAACTAGGAGCGAGCTGGACGCAGCCATTGAAGGCAACAAGCGTGAGGGTCGCCGTGCATCGGGACAGTACGACGCACAAGCTGCTTTAGCTATGCCCCCACTAAACCGCGTGCCCGCGTCTCTCGCGCAGCTGTCGCAGCACATGCAGCCGTTGTCGCTGTCGCTGGGAGGTGTGGCACCACGCTTGCCGCCGCTGCCGCCGCACGCGCCGCACCTTGCGCAGCACGACATTGAGTACAGGGTGCGCGAGTATATGAAGATGATACAGCAGCAGAGGGAGCTAATGAGAAATGGCTCCGAATCGCCTCCTAGCAATGGTCCTGCTCCTATAATGTCTCCTCGCGACGCAGCGGCCCTCAGTGCCATTGACGTCTCCCGCCTCACTCTCTGGTCGCTCTACAACAATAACAACAACAACAGCCCACAACCCGACCTCGAGCCACAACGCGAGGCTCTGAACCTGAGCGAGAGCCCCAACTCTCTGACGAGCAGTGGCAAGCGCGAGGCGTGCCGCTCGCCCGCGCCGCCCGCCAAGCGCCGCACGCCGCGCCCGCTGTCGCGGCCCCCCTCCCCGCGCTCGGACCACTCGCCGCCGCAGCAGCTCCACAGCCGCAGGGACGCCACGTCGCCGCCACAGATCAACGGCATGCCCAATTCCAACGGTGTCAACGGAGCTGCCTTCAAGATTACTACCAGAGGAGATGCGAGCACAGGTGACCAGCAACTGGTAGTATCAATAGAGCTGAATGGAGTAACATATGAAGGAGTACTCTTTCCCTCAGGCAACGGTCAGAATGGGCACAGACAAATGGTGTCTTAA
- Protein Sequence
- MVIDCILHGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGVAPRLPPLPPHAPHLAQHDIEYRVREYMKMIQQQRELMRNGSESPPSNGPAPIMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSLTSSGKREACRSPAPPAKRRTPRPLSRPPSPRSDHSPPQQLHSRRDATSPPQINGMPNSNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029938;
- 90% Identity
- iTF_01025756;
- 80% Identity
- iTF_01094680; iTF_01092846;