Ofas023516.1
Basic Information
- Insect
- Oligia fasciuncula
- Gene Symbol
- clz9
- Assembly
- GCA_963082905.1
- Location
- OY720406.1:7046584-7047951[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-07 6.9e-05 23.4 0.0 2 36 9 43 8 47 0.85
Sequence Information
- Coding Sequence
- ATGGCACCCAAACGAAATTATTCGAAAGATCAAATGACTAGAGCAATCGAAGATGTACAAAGAGGAGAAAAGGTAGCTGTAGCCGCTACCAAATATGGTGTCCCCAGAATAACTTTAAGAAACAAAGTTATGGGGATAAGCCCGCTGGACTGCAACTTAGGGCCTTCTACAGTGCTGAaccaagaagaagaaaaagtatTGGTCAAATGGGTTTTATTCATGGCTGAAAACCATTTCCCAGTCACAAAGGACCATTTGTTAGATAGTGTccaaaaaattattttggaaaaaaaaatggacaacTGCCCGTTCACAAATAATCGCCCAGGAAAAAAATGGTTCAGTTCGTTTTTGAGCCGTCATCCAGAATTGGCGCAAAGAACGGCACAAAATTTGACAAAGGCCAGAGAAGACGTAACTGAAGAAGAGTTGAACCAATGGTTTCAAACAATAAAGACTTATGTAGAAGGTAAGGGGTTGTTAGATGTACTAAAGGACCCTACAAGGATATACAACACGGATGAAAGCGCTTTCTACTTGCAGCCTAAAGCAGGCAGAGTACTAGTACGAAAAGgcgaaaaaaacgtttatagTTCCTCTGGCGATGAGAAAGAGAACTTAACAGTATTAATTACTGCCAATGCTGCAGGAGTTATAGCTCCGCCTATGGTAGTGTATCCCTATGAAAGAATACCGACACTCATTGTCAAAAGTGTGCCTAGTGGATGGGGCATAGGGCGGTCGGAAACAGGATGGATGTGTGCAAAGACATTCTACGAATTTATCACCAATGTTTTTAACCCATGGCTTATACAAAAAGAGATACCGAAACCGGTCATTTTTTTTCTAGACGGGCATAAGTCCCACATGTCTTTGCACCTTGCAAACTTTTGCAGAGATAATGGCATAGAGTTAATTGCACTATTCCCCAATTCCACTCACTTAATCCAACCGATGGACGTGGCGGTCTTTCGGCCACTCAAAATTTCCTGGAGAGTTCAGGTTATGAAATGGAAGTCTGAAAATCCAGGCGCACGTTTGAAAAAGGAAGATTTCGCGCAAAATTTGCAAGAAGCTTTAAAAAGTATTTGCCCTGAAACCATACAAAACGGTTTTCGTAAAAGTGGCCTTTACCCATTTAGTTCGGAATATGTGGATATGACCAAAATTGGTTCCCGCAATCGCACTATCAGATCTCAACCACTCCAGACAGaagatatgataaaaaaaaaacaatttatgcaAACTTTAGAAGCAGAGATACAGAAAGTGTTTTCATCTGAAAAAATTACTCTTTTCAACAAACTGTATTTCATGCCTAGAAATGAAGTAGATAATCTACTGCCTGACGAAGATCAATCTCTATAG
- Protein Sequence
- MAPKRNYSKDQMTRAIEDVQRGEKVAVAATKYGVPRITLRNKVMGISPLDCNLGPSTVLNQEEEKVLVKWVLFMAENHFPVTKDHLLDSVQKIILEKKMDNCPFTNNRPGKKWFSSFLSRHPELAQRTAQNLTKAREDVTEEELNQWFQTIKTYVEGKGLLDVLKDPTRIYNTDESAFYLQPKAGRVLVRKGEKNVYSSSGDEKENLTVLITANAAGVIAPPMVVYPYERIPTLIVKSVPSGWGIGRSETGWMCAKTFYEFITNVFNPWLIQKEIPKPVIFFLDGHKSHMSLHLANFCRDNGIELIALFPNSTHLIQPMDVAVFRPLKISWRVQVMKWKSENPGARLKKEDFAQNLQEALKSICPETIQNGFRKSGLYPFSSEYVDMTKIGSRNRTIRSQPLQTEDMIKKKQFMQTLEAEIQKVFSSEKITLFNKLYFMPRNEVDNLLPDEDQSL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00745602; iTF_01246786; iTF_01076428; iTF_00446066;
- 90% Identity
- iTF_00745602;
- 80% Identity
- -