Ddah023681.1
Basic Information
- Insect
- Diarsia dahlii
- Gene Symbol
- clz9
- Assembly
- GCA_949775195.1
- Location
- OX459203.1:148664-149914[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-07 0.00021 22.3 0.0 2 38 9 44 8 49 0.87 2 2 2.3 2e+03 -0.0 0.0 4 16 131 143 128 146 0.83
Sequence Information
- Coding Sequence
- ATGGCACCCAAACGAAATTATTCCCAAGAACAAATGATCAGGGCAATTGATGAAGTAAAAAGAGGAGAAAAGGTGTCTGTAGCAGCTACCAAATATGGTGTTCCCAGAATCACTTTGAGAAACAAAGTTAAGGGGATAAGTCCGCTCGACTGGAACTTAGGGCCGTCCACAGAGCTCAGCAAAGAAGAAGAAAAGGTATTGGTCAAATGGGTTTTATTCATGGCTGAAAACCATTTCCCAGTCACAAAAGACCATTTATTGGACAGTGTACAAAAAATtatattggaaaaaaatttaGTTAACTGCCCCTTCACAAATAATCGCCCAGGAAAAAAATGGTTCACTTCGTTTTTGAATCGTCATCCAGAATTGGCGCAAAGGACGGCACAAAATTTGACAAAAGCCATAGAAGACGTGACTGAAGAAGAGTTGAACCAATGGTTTCAAACAATAAAGACATACATAGAAGGTAAAGGGTTGTCAGATGCACTAAAAGACCCTTCAAGGATATACAACACTGATGAAAGTGCTTTCTACTTGCAGCCTAAAGCAGGCAGAGTACTAGTACGTAAAGGAGAAAAAAACGTTTATAGTTCCTCTGGCGATGAGAAAGAAAACTTAACGGTATTAATTACTGCCAATGCTGCAGGAGTTATGGCTCCGCCTATGATTGTATATCCTTACGAGAGAATACCGACACTCATTGTCAAGAGCGTTCCTCGTGGATGGGGCATAGGGCGGTCAGAAACAGGATGGATGTGTGCAAAGACATTCTACGAATTTATCACTAATGTTTTTAATCCATGGCTTATACAAAAAGACATACCAAAACCGGTGGTTTTTTTTCTGGATGGGCACAAGTCCCACATGTCGTTGCACCTTGCAAATTTTTGCAGAGATAATGGGATAGAGTTAATTGCACTTTTCCCCAATTCcactcacttaatccaaccgaTGGACGTGGCGGTCTTTCGGCCACTCAAAATTTCCTGGAGAGTTCAGGTCATGAAATGGAAGTCTGAAAATCCAGGCGCACGTTTGAAAaaggaagatttcgcgccaaaTTTGCAAGAGGCTTTAAAAGGCATTTGCCCTGACACCATAAAAAACGGTTTTCGTAAAAGTGGCCTTTACCCATTTAGCTCGGAATATGTGGATATGACCAAAATTGCTTCCCGCAGTCGCACCATCAGATCTCAACCATCCCAGACAGaagatatgataaaaaaaagcaatttaTGCAAACTTTAG
- Protein Sequence
- MAPKRNYSQEQMIRAIDEVKRGEKVSVAATKYGVPRITLRNKVKGISPLDWNLGPSTELSKEEEKVLVKWVLFMAENHFPVTKDHLLDSVQKIILEKNLVNCPFTNNRPGKKWFTSFLNRHPELAQRTAQNLTKAIEDVTEEELNQWFQTIKTYIEGKGLSDALKDPSRIYNTDESAFYLQPKAGRVLVRKGEKNVYSSSGDEKENLTVLITANAAGVMAPPMIVYPYERIPTLIVKSVPRGWGIGRSETGWMCAKTFYEFITNVFNPWLIQKDIPKPVVFFLDGHKSHMSLHLANFCRDNGIELIALFPNSTHLIQPMDVAVFRPLKISWRVQVMKWKSENPGARLKKEDFAPNLQEALKGICPDTIKNGFRKSGLYPFSSEYVDMTKIASRSRTIRSQPSQTEDMIKKSNLCKL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01093032;
- 90% Identity
- iTF_00745602;
- 80% Identity
- -